Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 2.4e-116 422.2 212 100.0
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 3.6e-96 355.1 212 81.6
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 2.4e-95 352.4 212 80.2
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 1.5e-94 349.7 212 82.1
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 1.4e-92 343.2 212 78.3
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 2.4e-92 342.4 212 78.8
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 2.3e-90 335.9 212 77.4
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 3.0e-90 335.5 199 83.4
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 3.9e-90 335.1 212 76.9
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 1.5e-89 333.2 212 79.2
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 1.9e-89 332.8 192 84.9
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 2.5e-89 332.4 212 77.4
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 3.3e-89 332.0 209 78.0
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 5.6e-89 331.3 212 76.9
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 1.3e-88 330.1 205 76.1
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 1.6e-88 329.7 205 75.6
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 8.1e-88 327.4 212 77.4
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 1.1e-87 327.0 227 70.9
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 2.6e-86 322.4 209 75.6
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 8.4e-85 317.4 209 73.7
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 4.2e-84 315.1 205 75.6
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 1.2e-83 313.5 205 74.1
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 1.6e-83 313.2 209 72.7
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 1.6e-83 313.2 212 70.8
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 2.1e-83 312.8 209 74.2
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 2.7e-83 312.4 206 71.8
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 2.3e-82 309.3 212 71.7
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 5.1e-82 308.1 209 71.3
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 5.1e-82 308.1 212 70.3
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 5.6e-81 304.7 213 71.4
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 2.8e-80 302.4 209 70.8
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.8e-80 301.6 213 71.4
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.8e-80 301.6 213 71.4
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.8e-80 301.6 213 71.4
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 6.2e-80 301.2 213 70.9
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 8.1e-80 300.8 213 71.4
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 2.4e-79 299.3 213 70.9
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 4.0e-79 298.5 213 69.0
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 6.9e-79 297.7 209 71.8
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 6.9e-79 297.7 209 71.8
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 6.9e-79 297.7 209 71.8
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 9.0e-79 297.4 217 68.2
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 9.0e-79 297.4 208 71.2
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 1.2e-78 297.0 205 70.7
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.2e-78 297.0 208 71.2
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 1.5e-78 296.6 213 69.5
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 1.5e-78 296.6 209 71.3
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 1.5e-78 296.6 209 69.9
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 2.0e-78 296.2 209 68.9
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 2.6e-78 295.8 213 70.0
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 2.6e-78 295.8 212 68.9
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 3.4e-78 295.4 209 70.8
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 4.5e-78 295.0 205 70.2
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 4.5e-78 295.0 209 69.4
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 5.8e-78 294.7 209 70.8
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.6e-78 294.3 206 71.4
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 9.9e-78 293.9 205 68.3
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 1.7e-77 293.1 205 69.8
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 1.7e-77 293.1 205 70.2
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 1.7e-77 293.1 213 69.5
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 6.4e-77 291.2 208 69.7
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 1.4e-76 290.0 213 66.7
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 1.9e-76 289.7 209 68.4
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 1.9e-76 289.7 209 67.5
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 4.2e-76 288.5 205 68.3
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 2.1e-75 286.2 210 68.1
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 2.7e-75 285.8 209 66.5
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 7.9e-75 284.3 205 68.3
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 1.8e-74 283.1 209 66.5
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 1.8e-74 283.1 214 67.8
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 3.0e-74 282.3 213 67.1
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 3.0e-74 282.3 212 67.9
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 3.0e-74 282.3 215 65.6
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 5.1e-74 281.6 212 67.0
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 2.5e-73 279.3 197 68.5
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 3.3e-73 278.9 212 65.6
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 4.3e-73 278.5 212 66.0
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 2.1e-72 276.2 181 74.0
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 4.8e-72 275.0 212 65.1
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 4.8e-72 275.0 210 64.3
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 1.8e-71 273.1 214 63.6
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 4.0e-71 271.9 212 64.6
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 4.0e-71 271.9 213 67.1
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 4.0e-71 271.9 213 67.1
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 4.0e-71 271.9 213 67.1
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 1.5e-70 270.0 193 67.9
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 1.5e-70 270.0 208 61.1
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 4.5e-70 268.5 213 66.7
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 4.5e-70 268.5 212 63.2
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 5.8e-70 268.1 212 63.2
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 2.9e-69 265.8 212 62.7
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 4.9e-69 265.0 216 63.0
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 4.9e-69 265.0 212 62.3
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 4.9e-69 265.0 212 63.2
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 6.5e-69 264.6 212 62.3
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 4.2e-68 261.9 212 62.3
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 2.1e-67 259.6 205 62.0
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 3.5e-67 258.8 193 66.8
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 4.6e-67 258.5 237 59.1
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 7.9e-67 257.7 190 68.4
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 1.0e-66 257.3 205 62.0
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.0e-66 257.3 198 62.6
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 2.5e-65 252.7 176 66.5
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 1.4e-63 246.9 200 65.0
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 4.5e-62 241.9 185 62.2
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 7.6e-62 241.1 210 61.4
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 1.1e-60 237.3 154 74.7
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 2.5e-60 236.1 155 72.9
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 5.1e-58 228.4 208 54.8
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 9.4e-52 207.6 144 68.8
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.7e-48 196.8 207 50.2
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 5.3e-47 191.8 212 52.4
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 4.4e-41 172.2 136 67.6
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 5.0e-37 158.7 113 66.4
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 9.7e-33 144.4 79 82.3
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 2.4e-31 139.8 169 40.8
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.5e-28 130.6 114 51.8
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 2.1e-27 126.7 171 42.1
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 2.8e-24 116.3 174 40.2
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 1.7e-21 107.1 63 74.6
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 3.6e-19 99.4 105 50.5
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 6.1e-19 98.6 89 61.8
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 9.8e-17 91.3 190 34.7
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 5.9e-14 82.0 50 72.0
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 7.7e-14 81.6 71 56.3
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 1.5e-12 77.4 83 49.4
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 1.6e-11 73.9 78 48.7
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 8.0e-11 71.6 92 45.7
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 5.7e-09 65.5 88 44.3
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 9.8e-09 64.7 150 33.3
Dinv18752 Davidia involucrata HOM05D036176 ORTHO05D007177 4.1e-07 59.3 47 63.8
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 5.9e-06 55.5 49 55.1


User provided reference genes

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