Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.8e-204 715.7 354 100.0
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.7e-122 443.4 354 61.6
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.7e-122 443.4 354 61.6
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.2e-121 438.7 346 62.7
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 6.0e-120 434.9 346 62.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-119 432.2 346 61.0
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.5e-118 430.3 346 59.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 2.1e-117 426.4 347 61.1
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 3.1e-116 422.5 351 61.3
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-116 421.8 348 60.9
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 2.0e-115 419.9 343 59.5
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.4e-114 414.5 332 61.1
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 8.4e-114 414.5 329 62.9
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.2e-113 412.5 345 58.6
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 5.5e-113 411.8 350 58.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 6.0e-112 408.3 352 57.7
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 6.0e-112 408.3 346 58.4
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 7.9e-112 407.9 348 58.6
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 5.1e-111 405.2 356 59.0
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.7e-111 404.8 343 57.7
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 3.3e-110 402.5 343 57.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 7.4e-110 401.4 343 57.1
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 9.6e-110 401.0 344 60.2
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.3e-109 400.6 343 57.4
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.6e-109 400.2 356 58.4
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 3.7e-109 399.1 356 55.9
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 4.8e-109 398.7 347 59.4
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 8.2e-109 397.9 346 58.7
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 2.4e-108 396.4 347 58.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 9.0e-108 394.4 347 58.2
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 9.0e-108 394.4 343 56.3
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.2e-107 394.0 350 55.7
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 2.0e-107 393.3 347 57.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 3.4e-107 392.5 346 58.7
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 4.5e-107 392.1 346 59.8
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 4.5e-107 392.1 344 57.8
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 5.8e-107 391.7 349 56.7
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 7.6e-107 391.3 350 56.0
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.0e-106 391.0 357 57.7
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-106 389.8 346 57.5
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.9e-106 389.4 350 55.7
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.4e-105 387.1 352 55.7
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.4e-105 387.1 352 55.7
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 3.2e-105 386.0 348 56.9
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 5.5e-105 385.2 350 57.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 7.1e-105 384.8 335 58.2
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 9.3e-105 384.4 352 56.0
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.6e-104 383.6 372 54.0
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 2.1e-104 383.3 348 56.9
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 3.5e-104 382.5 376 51.3
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 6.0e-104 381.7 349 54.7
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.8e-103 380.2 345 54.5
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.3e-103 379.8 349 55.3
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 6.7e-103 378.3 354 57.3
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.5e-102 376.3 363 54.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.5e-102 376.3 363 54.8
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 7.4e-102 374.8 362 54.1
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 7.4e-102 374.8 363 54.3
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.3e-101 374.0 362 56.4
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 4.8e-101 372.1 356 52.0
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 6.3e-101 371.7 351 56.1
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.8e-100 370.2 349 54.7
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.1e-100 369.4 367 52.3
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 4.1e-100 369.0 351 51.9
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.5e-99 367.1 357 53.8
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.4e-99 365.9 346 55.2
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 3.4e-99 365.9 357 54.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.7e-98 363.6 358 52.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 6.5e-98 361.7 355 52.4
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.1e-97 360.9 351 52.4
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 2.5e-97 359.8 352 54.5
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.2e-97 359.4 368 54.3
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.2e-96 357.5 361 53.7
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.6e-96 357.1 354 53.4
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.6e-96 355.9 360 53.6
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 7.9e-96 354.8 352 54.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 6.7e-95 351.7 346 51.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 8.8e-95 351.3 360 52.5
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.5e-94 350.5 358 53.9
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 5.7e-94 348.6 354 53.7
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 9.7e-94 347.8 341 54.5
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 9.7e-94 347.8 351 53.6
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.3e-93 347.4 359 52.6
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.7e-93 347.1 361 51.8
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 6.3e-93 345.1 359 52.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.1e-92 342.8 363 49.9
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 9.1e-92 341.3 361 52.1
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.5e-91 340.5 335 54.3
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 3.8e-90 335.9 335 54.0
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 5.0e-90 335.5 335 54.0
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.2e-88 330.9 360 51.7
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.4e-87 327.4 351 51.0
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.8e-84 317.0 327 50.8
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.1e-81 307.8 249 60.6
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.8e-79 300.4 245 60.8
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.6e-75 286.6 346 46.8
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 5.9e-75 285.4 226 60.6
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 5.5e-73 278.9 344 46.2
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.0e-66 258.1 282 48.9
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.0e-66 258.1 353 41.6
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.7e-66 257.3 224 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.5e-57 227.6 371 37.2
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.7e-56 222.6 200 56.0
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 6.1e-56 222.2 164 65.2
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-55 220.7 200 55.5
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-54 217.2 200 54.5
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 4.4e-54 216.1 310 42.3
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 4.5e-51 206.1 200 54.0
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.9e-49 200.7 201 51.2
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 3.6e-48 196.4 208 50.5
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 9.2e-44 181.8 147 63.9
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 3.6e-40 169.9 234 41.5
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 6.2e-40 169.1 141 57.4
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.4e-39 167.9 378 31.0
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-35 152.9 120 64.2
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.3e-33 145.6 199 43.2
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 8.9e-31 138.7 165 41.8
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-18 98.6 65 76.9
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.8e-16 90.5 65 69.2
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.9e-13 80.5 65 67.7
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 4.3e-09 66.6 109 38.5
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 52 61.5
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.6e-08 64.7 53 64.2
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.6e-08 64.7 53 64.2
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.6e-08 64.7 53 64.2
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 1.1e-07 62.0 52 61.5
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 1.4e-07 61.6 156 28.8
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.4e-07 61.6 51 60.8


User provided reference genes

Program Settings