Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 6.6e-293 1010.0 514 100.0
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 3.8e-139 499.2 479 56.6
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 5.8e-132 475.3 466 54.1
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 2.9e-131 473.0 477 53.2
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 4.1e-125 452.6 462 55.0
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 2.6e-124 449.9 482 52.7
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 1.0e-123 448.0 477 52.0
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 1.1e-117 427.9 484 47.9
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 4.1e-117 426.0 501 49.3
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 9.0e-117 424.9 515 46.4
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 1.2e-116 424.5 484 45.7
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 3.4e-116 422.9 482 49.8
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 3.4e-116 422.9 547 45.7
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 2.9e-115 419.9 515 46.4
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 8.5e-115 418.3 478 49.2
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 5.5e-114 415.6 507 45.8
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 9.4e-114 414.8 472 48.1
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.6e-113 414.1 475 48.2
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 2.7e-113 413.3 468 48.7
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 4.6e-113 412.5 511 45.6
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 4.6e-113 412.5 466 48.1
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 6.1e-113 412.1 472 47.2
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.0e-112 411.4 477 48.4
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 2.3e-112 410.2 508 45.1
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 3.0e-112 409.8 507 45.4
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 5.1e-112 409.1 509 44.8
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 7.4e-111 405.2 488 48.0
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 9.7e-111 404.8 472 46.6
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.3e-110 404.4 511 44.8
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.8e-110 403.3 475 46.7
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 3.7e-110 402.9 467 48.4
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.4e-109 401.0 475 46.5
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.4e-109 400.2 475 46.3
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.1e-109 399.8 467 47.1
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 1.2e-108 397.9 464 48.9
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 2.0e-108 397.1 476 47.7
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 2.6e-108 396.7 488 47.1
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 2.6e-108 396.7 512 46.1
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 3.4e-108 396.4 504 47.2
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 5.9e-108 395.6 467 47.5
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 5.9e-108 395.6 477 48.2
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 7.7e-108 395.2 467 47.1
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 7.7e-108 395.2 510 44.1
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 3.8e-107 392.9 467 48.4
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 3.8e-107 392.9 467 47.3
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 6.5e-107 392.1 469 47.8
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.4e-106 391.0 466 46.1
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.9e-106 390.6 461 47.5
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 3.2e-106 389.8 467 47.8
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 1.6e-105 387.5 472 46.0
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 3.6e-105 386.3 478 46.4
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 3.6e-105 386.3 476 46.2
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 4.7e-105 386.0 484 45.9
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 6.1e-105 385.6 473 46.5
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 6.1e-105 385.6 477 45.1
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 7.9e-105 385.2 468 45.7
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 3.9e-104 382.9 413 49.6
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 6.7e-104 382.1 476 47.7
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 8.8e-104 381.7 466 47.0
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 1.1e-103 381.3 472 46.8
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 1.5e-103 380.9 468 46.8
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 2.6e-103 380.2 465 46.0
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 3.3e-103 379.8 465 46.5
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 9.7e-103 378.3 467 46.0
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 1.7e-102 377.5 475 46.5
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 4.8e-102 375.9 489 44.2
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 4.8e-102 375.9 468 45.9
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 8.2e-102 375.2 494 44.3
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.1e-101 374.8 471 45.6
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 1.4e-101 374.4 459 47.9
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 3.1e-101 373.2 479 45.7
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 4.1e-101 372.9 484 47.1
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 5.3e-101 372.5 466 45.9
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 2.6e-100 370.2 475 44.8
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 1.0e-99 368.2 465 45.6
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 5.0e-99 365.9 493 44.2
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 8.5e-99 365.2 484 43.4
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.9e-98 364.0 478 44.1
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 2.1e-97 360.5 414 48.1
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 8.0e-97 358.6 501 42.9
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 4.4e-95 352.8 429 45.5
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 1.6e-92 344.4 542 41.1
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 3.6e-89 333.2 461 43.2
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 1.0e-80 305.1 404 44.1
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 1.0e-80 305.1 469 40.1
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 3.0e-80 303.5 400 45.8
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 4.0e-80 303.1 457 39.8
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.3e-75 288.1 463 40.2
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 9.5e-74 282.0 413 43.6
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 6.1e-73 279.3 464 38.6
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 3.7e-70 270.0 384 43.0
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 2.0e-68 264.2 471 38.6
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.5e-66 258.1 346 42.8
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 7.0e-61 239.2 350 40.9
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 7.0e-61 239.2 196 59.2
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 3.9e-59 233.4 330 42.1
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.1e-58 231.9 170 66.5
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 1.8e-56 224.6 200 57.0
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 8.9e-56 222.2 202 55.0
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 1.5e-55 221.5 542 29.7
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.9e-53 214.5 467 32.3
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 3.5e-52 210.3 522 31.4
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.2e-47 195.3 494 29.6
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.0e-43 182.2 271 40.6
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.0e-43 182.2 291 39.2
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 6.6e-43 179.5 256 42.6
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 7.3e-42 176.0 123 69.9
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.2e-41 175.3 123 69.1
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.2e-37 160.6 214 42.1
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 1.6e-33 148.3 171 43.9
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 7.6e-23 112.8 94 60.6
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 1.4e-21 108.6 69 72.5
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 7.1e-21 106.3 101 53.5
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 7.1e-21 106.3 105 47.6
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 6.0e-12 76.6 71 56.3
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 6.7e-11 73.2 81 44.4
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 3.3e-10 70.9 54 64.8
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 5.7e-10 70.1 223 29.1
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 2.1e-09 68.2 115 40.9
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 5.3e-08 63.5 48 62.5


User provided reference genes

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