Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 2.1e-299 1031.6 519 100.0
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 2.2e-211 739.2 466 76.4
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 4.9e-211 738.0 470 78.1
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 6.0e-209 731.1 470 75.7
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 4.7e-206 721.5 469 74.8
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.3e-205 719.2 466 75.8
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 7.5e-204 714.1 468 75.4
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 1.7e-203 713.0 471 74.7
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 1.7e-203 713.0 475 76.0
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 4.9e-203 711.4 429 80.2
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 2.4e-202 709.1 480 73.1
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 1.6e-201 706.4 474 73.0
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 2.1e-201 706.1 468 74.4
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 3.5e-201 705.3 469 73.8
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 4.6e-201 704.9 467 73.0
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.3e-200 702.6 469 74.0
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 3.0e-200 702.2 468 74.1
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 5.1e-200 701.4 467 74.7
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.1e-200 701.4 467 72.8
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 6.6e-200 701.0 471 73.2
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 8.6e-200 700.7 471 74.1
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 1.9e-199 699.5 423 77.8
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 3.3e-199 698.7 449 74.6
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.3e-199 698.7 469 72.3
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 4.3e-199 698.4 469 72.7
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 5.6e-199 698.0 467 74.1
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 7.3e-199 697.6 469 72.3
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 9.5e-199 697.2 413 79.7
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 2.1e-198 696.0 468 73.7
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 3.6e-198 695.3 470 73.0
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 6.2e-198 694.5 471 72.0
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 8.1e-198 694.1 468 73.7
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.1e-197 693.7 464 72.8
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.3e-197 692.6 512 68.4
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.3e-197 692.6 469 71.9
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 2.3e-197 692.6 449 74.6
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.3e-197 692.6 424 77.8
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.3e-197 692.6 465 72.9
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.8e-197 691.0 469 71.6
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 6.8e-197 691.0 467 73.0
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 8.9e-197 690.6 466 71.9
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 2.0e-196 689.5 475 71.6
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 2.0e-196 689.5 423 76.8
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 2.6e-196 689.1 449 74.2
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.4e-194 683.3 459 73.0
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 1.4e-194 683.3 423 76.1
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 4.1e-194 681.8 471 73.0
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 5.4e-194 681.4 468 70.3
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 7.1e-194 681.0 466 70.4
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.6e-193 679.9 454 74.7
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 1.6e-193 679.9 462 72.1
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 2.7e-193 679.1 415 78.8
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 6.0e-193 677.9 467 73.0
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.3e-192 676.8 469 72.1
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 2.3e-192 676.0 467 71.7
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 3.0e-192 675.6 433 74.8
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 3.9e-192 675.2 469 71.9
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 5.1e-192 674.9 474 69.4
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.1e-191 673.7 470 72.3
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 2.5e-191 672.5 422 74.9
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 2.5e-191 672.5 472 70.6
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 2.5e-191 672.5 453 71.7
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 9.6e-191 670.6 409 77.8
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 2.8e-190 669.1 425 76.7
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 2.8e-190 669.1 469 71.4
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 4.7e-190 668.3 464 71.6
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 1.1e-189 667.2 472 69.5
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 1.4e-189 666.8 463 70.8
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 1.4e-189 666.8 421 75.1
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.5e-188 663.3 464 71.6
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.5e-188 663.3 464 71.6
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.5e-188 663.3 445 73.3
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 4.4e-188 661.8 465 68.6
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 4.4e-188 661.8 469 69.1
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 9.9e-188 660.6 458 70.5
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 3.8e-187 658.7 464 70.9
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 6.4e-187 657.9 463 71.7
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 3.2e-186 655.6 464 70.7
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 3.5e-185 652.1 488 67.6
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 3.0e-184 649.0 490 67.3
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 3.9e-184 648.7 396 78.3
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.6e-182 643.3 514 63.2
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 5.3e-181 638.3 477 67.3
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.4e-180 635.2 407 74.7
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.5e-175 620.2 387 77.0
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.6e-169 600.1 406 72.2
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 3.3e-167 592.4 420 66.9
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 2.1e-166 589.7 413 66.8
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 8.4e-163 577.8 420 66.2
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 2.3e-160 569.7 389 72.5
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 7.7e-148 528.1 477 59.5
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 8.5e-147 524.6 324 78.7
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 8.8e-136 488.0 344 68.9
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 1.8e-133 480.3 461 57.5
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 7.2e-122 441.8 400 54.5
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.4e-117 426.8 451 49.9
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 1.7e-115 420.6 407 52.6
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 3.2e-114 416.4 451 48.6
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 3.7e-110 402.9 412 50.0
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 1.5e-95 354.4 405 44.2
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 4.3e-74 283.1 203 68.0
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 9.9e-71 271.9 187 71.7
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 9.3e-69 265.4 204 62.7
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 9.3e-69 265.4 204 62.7
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 9.0e-56 222.2 198 56.6
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.7e-25 121.7 80 76.2
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 8.5e-22 109.4 61 82.0


User provided reference genes

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