Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.5e-118 429.5 213 100.0
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 3.6e-104 381.7 211 88.2
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 8.6e-29 131.3 231 40.3
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 2.5e-28 129.8 232 42.7
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.1e-27 126.7 224 38.4
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 2.8e-27 126.3 221 40.3
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 3.0e-26 122.9 217 42.4
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 4.0e-26 122.5 231 38.5
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.2e-24 116.7 221 37.1
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.2e-24 116.7 222 38.7
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.2e-24 116.7 222 38.7
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 6.4e-24 115.2 227 39.2
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 8.3e-24 114.8 227 39.2
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 2.4e-23 113.2 223 37.7
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 4.1e-23 112.5 221 36.7
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 4.1e-23 112.5 223 36.3
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 5.4e-23 112.1 219 37.0
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 2.0e-22 110.2 218 37.2
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 3.5e-22 109.4 217 36.9
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 7.8e-22 108.2 217 36.4
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.3e-21 107.5 223 35.9
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 2.3e-21 106.7 224 36.2
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 3.0e-21 106.3 217 35.0
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 3.0e-21 106.3 217 35.0
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 3.9e-21 105.9 218 38.1
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 3.9e-21 105.9 223 35.0
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 6.6e-21 105.1 223 35.4
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 8.6e-21 104.8 222 33.8
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 1.5e-20 104.0 231 35.1
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 1.9e-20 103.6 226 36.7
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 2.5e-20 103.2 221 36.2
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 3.3e-20 102.8 226 36.3
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 4.3e-20 102.4 211 37.0
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 4.3e-20 102.4 222 36.9
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 4.3e-20 102.4 219 32.9
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 5.6e-20 102.1 211 37.0
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 7.3e-20 101.7 223 37.2
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 9.5e-20 101.3 222 33.8
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 9.5e-20 101.3 221 36.7
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 9.5e-20 101.3 229 34.5
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 1.6e-19 100.5 230 33.0
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 2.1e-19 100.1 216 37.0
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 2.8e-19 99.8 214 35.5
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 2.8e-19 99.8 242 35.1
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 3.6e-19 99.4 226 37.2
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 4.7e-19 99.0 215 34.0
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 4.7e-19 99.0 229 34.1
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 8.0e-19 98.2 220 34.5
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 8.0e-19 98.2 213 37.6
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 1.0e-18 97.8 223 30.9
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 1.0e-18 97.8 230 33.0
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 1.0e-18 97.8 226 35.4
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 1.4e-18 97.4 213 35.2
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 1.4e-18 97.4 224 31.7
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 1.4e-18 97.4 233 36.1
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.8e-18 97.1 213 37.1
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 4.0e-18 95.9 219 34.2
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 4.0e-18 95.9 228 33.8
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 4.0e-18 95.9 228 34.2
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 4.0e-18 95.9 221 32.1
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 5.2e-18 95.5 228 35.1
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 8.9e-18 94.7 196 38.3
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 1.5e-17 94.0 228 34.2
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 2.0e-17 93.6 211 36.5
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 2.0e-17 93.6 211 36.5
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 2.0e-17 93.6 192 38.5
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 2.6e-17 93.2 226 35.8
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 3.4e-17 92.8 200 31.0
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 5.8e-17 92.0 216 31.0
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 7.5e-17 91.7 223 29.6
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 9.8e-17 91.3 189 33.3
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.3e-16 90.9 225 30.2
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.3e-16 90.9 225 30.2
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 1.7e-16 90.5 225 31.1
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 1.7e-16 90.5 185 38.4
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 2.9e-16 89.7 215 29.8
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.9e-16 89.7 227 34.8
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.9e-16 89.7 227 34.8
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 3.7e-16 89.4 223 34.5
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 3.7e-16 89.4 225 30.7
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 4.9e-16 89.0 193 35.8
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 4.9e-16 89.0 218 31.7
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 2.4e-15 86.7 200 33.0
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 3.2e-15 86.3 223 35.4
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.2e-15 86.3 199 34.7
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 5.4e-15 85.5 217 32.7
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 7.0e-15 85.1 141 37.6
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 9.2e-15 84.7 214 31.3
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 9.2e-15 84.7 177 36.7
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.2e-14 84.3 227 32.2
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 2.7e-14 83.2 225 29.8
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 3.5e-14 82.8 199 33.7
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 6.0e-14 82.0 215 31.2
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 6.0e-14 82.0 215 31.2
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 6.0e-14 82.0 215 31.2
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 6.0e-14 82.0 219 35.2
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.0e-13 81.3 228 32.5
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 1.0e-13 81.3 199 34.2
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 1.7e-13 80.5 199 33.2
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 2.3e-13 80.1 207 33.3
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.1e-12 77.8 231 29.9
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 7.3e-12 75.1 200 33.0
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 3.6e-11 72.8 215 33.0
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 4.7e-11 72.4 204 31.9
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.4e-10 70.9 213 30.0
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 5.8e-09 65.5 227 30.0
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 8.3e-08 61.6 194 30.9
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 2.4e-07 60.1 233 27.9
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 3.2e-07 59.7 114 34.2
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 3.2e-07 59.7 114 35.1


User provided reference genes

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