Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0094 Ceratophyllum demersum HOM05D004793 ORTHO05D004423 8.4e-79 297.0 151 100.0
CDE04G1256 Ceratophyllum demersum HOM05D000020 ORTHO05D000156 1.7e-26 123.2 94 74.5
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 9.1e-09 64.3 121 40.5
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 2.0e-08 63.2 120 40.8
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 2.0e-08 63.2 121 35.5
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 2.7e-08 62.8 122 40.2
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 3.5e-08 62.4 125 36.0
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 7.7e-08 61.2 126 38.9
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 1.3e-07 60.5 119 40.3
SalBow7G3719 Salvia bowleyana HOM05D004793 ORTHO05D004423 1.7e-07 60.1 114 39.5
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 2.2e-07 59.7 122 41.0
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.9e-07 59.3 37 81.1
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.8e-07 58.9 121 38.0
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.8e-07 58.9 121 38.0
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 3.8e-07 58.9 126 37.3
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 3.8e-07 58.9 123 35.8
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 5.0e-07 58.5 135 39.3
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 6.5e-07 58.2 126 38.9
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 6.5e-07 58.2 124 39.5
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 6.5e-07 58.2 118 39.0
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.5e-07 57.8 130 38.5
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.1e-06 57.4 120 39.2
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 1.5e-06 57.0 109 40.4
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 1.5e-06 57.0 120 40.0
ATR0712G036 Amborella trichopoda HOM05D004793 ORTHO05D004423 1.9e-06 56.6 127 36.2
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 1.9e-06 56.6 110 41.8
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 1.9e-06 56.6 110 41.8
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 2.5e-06 56.2 126 38.9
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 3.2e-06 55.8 129 37.2
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.2e-06 55.8 138 38.4
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 3.2e-06 55.8 135 34.1
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 3.2e-06 55.8 138 38.4
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 4.2e-06 55.5 135 36.3
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 4.2e-06 55.5 131 38.9
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 4.2e-06 55.5 108 38.9
HPP92_023588 Vanilla planifolia HOM05D020977 ORTHO05D004423 4.2e-06 55.5 111 36.9
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 7.2e-06 54.7 126 37.3
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.2e-06 54.7 112 39.3
HPP92_012227 Vanilla planifolia HOM05D004793 ORTHO05D004423 7.2e-06 54.7 114 36.8
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 9.4e-06 54.3 129 38.0
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 9.4e-06 54.3 129 38.8
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 9.4e-06 54.3 128 36.7


User provided reference genes

Program Settings