Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0086 Ceratophyllum demersum HOM05D002590 ORTHO05D002763 7.4e-150 533.9 276 100.0
TAR376G0018 Trochodendron aralioides HOM05D002590 ORTHO05D002763 5.9e-46 188.7 257 41.2
Hma1.2p1_0080F.1_g042110 Hydrangea macrophylla HOM05D002590 ORTHO05D002763 1.3e-45 187.6 257 41.2
MBI16_g44750_MAGBIO Magnolia biondii HOM05D002590 ORTHO05D002763 1.4e-44 184.1 217 41.5
Nn5g29774 Nelumbo nucifera HOM05D002590 ORTHO05D002763 9.4e-44 181.4 214 43.0
Dinv36977 Davidia involucrata HOM05D002590 ORTHO05D002763 2.1e-43 180.3 257 38.9
Dinv44885 Davidia involucrata HOM05D002590 ORTHO05D002763 1.1e-41 174.5 190 45.3
TAR381G1305 Trochodendron aralioides HOM05D002590 ORTHO05D002763 5.7e-41 172.2 214 41.6
CSS0030408 Camellia sinensis var. sinensis HOM05D002590 ORTHO05D002763 7.4e-41 171.8 257 39.7
Atru.chr3.1151 Acer truncatum HOM05D002590 ORTHO05D002763 1.3e-40 171.0 257 38.5
CSS0035578 Camellia sinensis var. sinensis HOM05D002590 ORTHO05D002763 1.3e-40 171.0 224 40.6
PSO210G6445 Papaver somniferum HOM05D002590 ORTHO05D002763 1.7e-40 170.6 261 39.1
Atru.chr3.1168 Acer truncatum HOM05D002590 ORTHO05D002763 3.7e-40 169.5 257 38.1
PSO210G0325 Papaver somniferum HOM05D002590 ORTHO05D002763 3.7e-40 169.5 264 37.1
TAR381G1618 Trochodendron aralioides HOM05D002590 ORTHO05D002763 1.1e-39 167.9 256 38.3
Potri.015G042800 Populus trichocarpa HOM05D002590 ORTHO05D002763 1.8e-39 167.2 261 38.7
Aqoxy6G00635 Aquilegia oxysepala HOM05D002590 ORTHO05D002763 6.9e-39 165.2 264 37.1
ATR0800G118 Amborella trichopoda HOM05D002590 ORTHO05D002763 1.5e-38 164.1 202 41.1
Cc07_g07850 Coffea canephora HOM05D002590 ORTHO05D002763 1.5e-38 164.1 257 35.8
Sabra15G0042600 Salix brachista HOM05D002590 ORTHO05D002763 2.0e-38 163.7 255 36.9
Lj2g0000215 Lotus japonicus HOM05D002590 ORTHO05D002763 2.6e-38 163.3 258 38.4
Sopen02g014540 Solanum pennellii HOM05D002590 ORTHO05D002763 2.6e-38 163.3 272 36.4
PGSC0003DMG400010387 Solanum tuberosum HOM05D002590 ORTHO05D002763 3.4e-38 162.9 257 35.8
GSVIVG01006770001 Vitis vinifera HOM05D002590 ORTHO05D002763 5.9e-38 162.2 193 40.9
Cpa.g.sc755.1 Carica papaya HOM05D002590 ORTHO05D002763 1.3e-37 161.0 251 36.7
CAN.G215.6 Capsicum annuum HOM05D002590 ORTHO05D002763 2.2e-37 160.2 258 36.0
CiPaw.07G042400 Carya illinoinensis HOM05D002590 ORTHO05D002763 2.9e-37 159.8 258 39.1
Haze_22502 Corylus avellana HOM05D002590 ORTHO05D002763 2.9e-37 159.8 190 43.2
Sabra15G0049300 Salix brachista HOM05D002590 ORTHO05D002763 2.9e-37 159.8 259 37.8
Ciclev10024875m.g Citrus clementina HOM05D002590 ORTHO05D002763 5.0e-37 159.1 189 43.4
Nitab4.5_0000291g0070 Nicotiana tabacum HOM05D002590 ORTHO05D002763 5.0e-37 159.1 192 38.0
Nitab4.5_0002713g0020 Nicotiana tabacum HOM05D002590 ORTHO05D002763 5.0e-37 159.1 265 36.2
Nitab4.5_0002135g0020 Nicotiana tabacum HOM05D002590 ORTHO05D002763 8.5e-37 158.3 190 38.4
TWI74G1198 Tripterygium wilfordii HOM05D002590 ORTHO05D002763 8.5e-37 158.3 259 36.7
Glyma.09G202600 Glycine max HOM05D002590 ORTHO05D002763 1.9e-36 157.1 256 35.2
Solyc02g063450.4 Solanum lycopersicum HOM05D002590 ORTHO05D002763 2.5e-36 156.8 252 36.5
Haze_03932 Corylus avellana HOM05D002590 ORTHO05D002763 4.2e-36 156.0 273 36.6
Sed0010498 Sechium edule HOM05D002590 ORTHO05D002763 4.2e-36 156.0 188 41.0
AL7G12750 Arabidopsis lyrata HOM05D002590 ORTHO05D002763 1.2e-35 154.5 259 34.4
CiPaw.08G145500 Carya illinoinensis HOM05D002590 ORTHO05D002763 1.2e-35 154.5 202 39.1
Thhalv10024448m.g Eutrema salsugineum HOM05D002590 ORTHO05D002763 1.6e-35 154.1 270 34.8
Manes.13G104100 Manihot esculenta HOM05D002590 ORTHO05D002763 2.7e-35 153.3 255 36.9
Nitab4.5_0000036g0420 Nicotiana tabacum HOM05D002590 ORTHO05D002763 2.7e-35 153.3 266 35.7
Sabra15G0043900 Salix brachista HOM05D002590 ORTHO05D002763 2.7e-35 153.3 249 36.1
Duzib187G0808 Durio zibethinus HOM05D002590 ORTHO05D002763 4.7e-35 152.5 262 34.4
QL06p037430 Quercus lobata HOM05D002590 ORTHO05D002763 6.1e-35 152.1 269 37.2
QL12p039990 Quercus lobata HOM05D002590 ORTHO05D002763 7.9e-35 151.8 262 37.0
CAN.G1061.26 Capsicum annuum HOM05D002590 ORTHO05D002763 1.0e-34 151.4 243 34.2
AT4G37900 Arabidopsis thaliana HOM05D002590 ORTHO05D002763 1.4e-34 151.0 260 34.2
Hund16613 Selenicereus undatus HOM05D002590 ORTHO05D002763 1.8e-34 150.6 258 38.0
HPP92_013293 Vanilla planifolia HOM05D002590 ORTHO05D002763 2.3e-34 150.2 175 45.1
Aa31LG7G14160 Aethionema arabicum HOM05D002590 ORTHO05D002763 3.0e-34 149.8 230 36.5
Carub.0007s0232 Capsella rubella HOM05D002590 ORTHO05D002763 3.0e-34 149.8 262 34.4
MD01G1044900 Malus domestica HOM05D002590 ORTHO05D002763 5.1e-34 149.1 263 35.4
vmacro05519 Vaccinium macrocarpon HOM05D002590 ORTHO05D002763 5.1e-34 149.1 256 37.1
Cfa013829 Carpinus fangiana HOM05D002590 ORTHO05D002763 6.7e-34 148.7 180 42.8
Solyc02g091650.4 Solanum lycopersicum HOM05D002590 ORTHO05D002763 8.8e-34 148.3 209 36.4
Glyma.01G019800 Glycine max HOM05D002590 ORTHO05D002763 1.5e-33 147.5 257 35.0
PGSC0003DMG400030615 Solanum tuberosum HOM05D002590 ORTHO05D002763 1.5e-33 147.5 179 39.1
A08p22920 Brassica napus HOM05D002590 ORTHO05D002763 2.6e-33 146.7 267 34.8
CsaV3_3G003000 Cucumis sativus L. HOM05D002590 ORTHO05D002763 3.3e-33 146.4 248 33.9
MELO3C013963.2 Cucumis melo HOM05D002590 ORTHO05D002763 4.4e-33 146.0 272 32.7
Gohir.D03G034500 Gossypium hirsutum HOM05D002590 ORTHO05D002763 5.7e-33 145.6 255 36.9
BcaB03g12326 Brassica carinata HOM05D002590 ORTHO05D002763 7.4e-33 145.2 266 33.5
COL.COLO4_11678 Corchorus olitorius HOM05D002590 ORTHO05D002763 7.4e-33 145.2 211 36.0
Gorai.003G036200 Gossypium raimondii HOM05D002590 ORTHO05D002763 7.4e-33 145.2 254 36.6
Manes.12G121200 Manihot esculenta HOM05D002590 ORTHO05D002763 7.4e-33 145.2 250 34.4
Medtr5g030890 Medicago truncatula HOM05D002590 ORTHO05D002763 7.4e-33 145.2 264 33.3
Sopen02g036260 Solanum pennellii HOM05D002590 ORTHO05D002763 7.4e-33 145.2 207 34.8
BcaC01g00368 Brassica carinata HOM05D002590 ORTHO05D002763 9.7e-33 144.8 264 34.1
C03p78950 Brassica napus HOM05D002590 ORTHO05D002763 9.7e-33 144.8 264 34.5
BolC3t20138H Brassica oleracea HOM05D002590 ORTHO05D002763 9.7e-33 144.8 264 34.1
Aa31LG6G14820 Aethionema arabicum HOM05D002590 ORTHO05D002763 1.7e-32 144.1 206 39.3
MSTRG.3507 Avicennia marina HOM05D002590 ORTHO05D002763 1.7e-32 144.1 182 39.6
ClCG00G003360 Citrullus lanatus HOM05D002590 ORTHO05D002763 1.7e-32 144.1 270 32.2
ClCG10G002950 Citrullus lanatus HOM05D002590 ORTHO05D002763 1.7e-32 144.1 270 32.2
Lalb_Chr16g0381481 Lupinus albus HOM05D002590 ORTHO05D002763 1.7e-32 144.1 185 40.5
SalBow3G1385 Salvia bowleyana HOM05D002590 ORTHO05D002763 2.8e-32 143.3 218 39.0
SalBow3G3065 Salvia bowleyana HOM05D002590 ORTHO05D002763 2.8e-32 143.3 218 39.0
Thecc.01G083700 Theobroma cacao HOM05D002590 ORTHO05D002763 4.8e-32 142.5 255 36.5
Sp7g35540 Schrenkiella parvula HOM05D002590 ORTHO05D002763 6.3e-32 142.1 261 33.7
TPR.G37027 Trifolium pratense HOM05D002590 ORTHO05D002763 6.3e-32 142.1 188 39.9
Peaxi162Scf00943g00417 Petunia axillaris HOM05D002590 ORTHO05D002763 8.2e-32 141.7 178 40.4
Ca_13471_v3 Cicer arietinum L. HOM05D002590 ORTHO05D002763 1.1e-31 141.4 188 38.3
Gohir.A02G146100 Gossypium hirsutum HOM05D002590 ORTHO05D002763 1.1e-31 141.4 254 35.4
CiPaw.07G161800 Carya illinoinensis HOM05D002590 ORTHO05D002763 1.8e-31 140.6 176 42.0
Lj4C175G12 Lonicera japonica HOM05D002590 ORTHO05D002763 1.8e-31 140.6 306 31.7
BraA08t34254Z Brassica rapa HOM05D002590 ORTHO05D002763 2.4e-31 140.2 262 34.0
arahy.Tifrunner.gnm1.ann1.KU7V2S Arachis hypogaea HOM05D002590 ORTHO05D002763 5.3e-31 139.0 256 34.4
Phvul.002G143100 Phaseolus vulgaris HOM05D002590 ORTHO05D002763 5.3e-31 139.0 175 40.6
VMungo1215G2859 Vigna mungo HOM05D002590 ORTHO05D002763 5.3e-31 139.0 175 41.1
Eucgr.I00602 Eucalyptus grandis HOM05D002590 ORTHO05D002763 7.0e-31 138.7 256 34.8
Aa31LG7G14140 Aethionema arabicum HOM05D002590 ORTHO05D002763 1.2e-30 137.9 200 36.0
AUR62032878 Chenopodium quinoa HOM05D002590 ORTHO05D002763 1.2e-30 137.9 242 36.4
Prupe.6G209600 Prunus persica HOM05D002590 ORTHO05D002763 1.5e-30 137.5 217 35.5
THA.LOC104807659 Tarenaya hassleriana HOM05D002590 ORTHO05D002763 1.5e-30 137.5 204 36.8
RcHm_v2.0_Chr2g0109991 Rosa chinensis HOM05D002590 ORTHO05D002763 2.6e-30 136.7 236 36.0
Migut.L00448 Erythranthe guttata HOM05D002590 ORTHO05D002763 3.5e-30 136.3 199 40.7
CARHR113920 Cardamine hirsuta HOM05D002590 ORTHO05D002763 4.5e-30 136.0 252 33.3
Rhsim04G0250100 Rhododendron simsii HOM05D002590 ORTHO05D002763 4.5e-30 136.0 313 34.2
Rhsim07G0172500 Rhododendron simsii HOM05D002590 ORTHO05D002763 4.5e-30 136.0 313 34.2
Actinidia19606 Actinidia chinensis HOM05D002590 ORTHO05D002763 5.9e-30 135.6 170 42.4
A04p17130 Brassica napus HOM05D002590 ORTHO05D002763 5.9e-30 135.6 262 32.1
arahy.Tifrunner.gnm1.ann1.WNQW91 Arachis hypogaea HOM05D002590 ORTHO05D002763 1.0e-29 134.8 261 35.2
arahy.Tifrunner.gnm1.ann1.ZD0NI5 Arachis hypogaea HOM05D002590 ORTHO05D002763 1.0e-29 134.8 261 35.2
CARHR246310 Cardamine hirsuta HOM05D002590 ORTHO05D002763 1.3e-29 134.4 256 31.6
Migut.H00293 Erythranthe guttata HOM05D002590 ORTHO05D002763 1.3e-29 134.4 247 34.0
FAN19G1400 Fragaria x ananassa HOM05D002590 ORTHO05D002763 1.7e-29 134.0 248 35.5
FAN26G3252 Fragaria x ananassa HOM05D002590 ORTHO05D002763 2.2e-29 133.7 245 34.7
Potri.002G108900 Populus trichocarpa HOM05D002590 ORTHO05D002763 2.2e-29 133.7 256 33.6
FAN28G1499 Fragaria x ananassa HOM05D002590 ORTHO05D002763 2.9e-29 133.3 245 34.7
SGA_v2.0_scaffold149G36515 Striga asiatica HOM05D002590 ORTHO05D002763 2.9e-29 133.3 255 34.1
FvH4_1g18970 Fragaria vesca HOM05D002590 ORTHO05D002763 3.8e-29 132.9 248 35.1
Manes.05G187500 Manihot esculenta HOM05D002590 ORTHO05D002763 3.8e-29 132.9 240 35.8
AT2G22660 Arabidopsis thaliana HOM05D002590 ORTHO05D002763 5.0e-29 132.5 244 32.4
BolC4t26766H Brassica oleracea HOM05D002590 ORTHO05D002763 5.0e-29 132.5 263 31.6
arahy.Tifrunner.gnm1.ann1.F9GNLP Arachis hypogaea HOM05D002590 ORTHO05D002763 6.5e-29 132.1 163 41.1
PGR031G2118 Punica granatum HOM05D002590 ORTHO05D002763 6.5e-29 132.1 254 32.7
BcaC02g08627 Brassica carinata HOM05D002590 ORTHO05D002763 8.5e-29 131.7 263 31.6
C04p51940 Brassica napus HOM05D002590 ORTHO05D002763 1.1e-28 131.3 263 31.6
Carub.0004s0181 Capsella rubella HOM05D002590 ORTHO05D002763 1.1e-28 131.3 250 32.0
Psat2g134480 Pisum sativum HOM05D002590 ORTHO05D002763 1.9e-28 130.6 242 33.1
AL4G12200 Arabidopsis lyrata HOM05D002590 ORTHO05D002763 4.2e-28 129.4 244 32.0
FAN23G0853 Fragaria x ananassa HOM05D002590 ORTHO05D002763 5.5e-28 129.0 245 33.5
BcaB06g27814 Brassica carinata HOM05D002590 ORTHO05D002763 1.2e-27 127.9 259 34.0
FvH4_5g33890 Fragaria vesca HOM05D002590 ORTHO05D002763 1.6e-27 127.5 193 37.3
FAN08G1103 Fragaria x ananassa HOM05D002590 ORTHO05D002763 1.6e-27 127.5 193 37.3
CANSAT01G0583 Cannabis sativa HOM05D002590 ORTHO05D002763 2.1e-27 127.1 254 31.5
Sp4g01683 Schrenkiella parvula HOM05D002590 ORTHO05D002763 2.1e-27 127.1 263 30.8
Ah.02g129220 Amaranthus hybridus HOM05D002590 ORTHO05D002763 2.7e-27 126.7 177 39.5
ECA232G2374 Erigeron canadensis HOM05D002590 ORTHO05D002763 2.7e-27 126.7 174 40.2
LjContig00408g0014186 Lotus japonicus HOM05D002590 ORTHO05D002763 2.7e-27 126.7 167 37.7
EL10Ac6g13303 Beta vulgaris HOM05D002590 ORTHO05D002763 4.7e-27 125.9 263 35.4
THA.LOC104804185 Tarenaya hassleriana HOM05D002590 ORTHO05D002763 8.0e-27 125.2 266 31.6
SalBow3G1036 Salvia bowleyana HOM05D002590 ORTHO05D002763 1.0e-26 124.8 174 35.6
Sc03g0000580 Simmondsia chinensis HOM05D002590 ORTHO05D002763 2.3e-26 123.6 152 39.5
FAN18G3860 Fragaria x ananassa HOM05D002590 ORTHO05D002763 5.2e-26 122.5 193 36.3
BraA04t17342Z Brassica rapa HOM05D002590 ORTHO05D002763 8.8e-26 121.7 258 31.8
Eucgr.F02168 Eucalyptus grandis HOM05D002590 ORTHO05D002763 1.5e-25 120.9 170 36.5
Atru.chr13.944 Acer truncatum HOM05D002590 ORTHO05D002763 3.3e-25 119.8 163 38.7
Thhalv10000046m.g Eutrema salsugineum HOM05D002590 ORTHO05D002763 1.3e-24 117.9 226 29.6
Glyma.02G217400 Glycine max HOM05D002590 ORTHO05D002763 1.3e-24 117.9 168 39.3
BcaNung03410 Brassica carinata HOM05D002590 ORTHO05D002763 1.7e-24 117.5 239 32.6
C07p62730 Brassica napus HOM05D002590 ORTHO05D002763 1.7e-24 117.5 160 38.1
BolC7t46687H Brassica oleracea HOM05D002590 ORTHO05D002763 1.7e-24 117.5 239 32.6
CARHR246300 Cardamine hirsuta HOM05D002590 ORTHO05D002763 1.7e-24 117.5 165 38.8
TWI56G0280 Tripterygium wilfordii HOM05D002590 ORTHO05D002763 2.2e-24 117.1 152 39.5
Actinidia11925 Actinidia chinensis HOM05D002590 ORTHO05D002763 3.7e-24 116.3 278 32.7
A03p65710 Brassica napus HOM05D002590 ORTHO05D002763 3.7e-24 116.3 191 34.6
BraA03t15621Z Brassica rapa HOM05D002590 ORTHO05D002763 3.7e-24 116.3 191 34.6
VMungo0647G0151 Vigna mungo HOM05D002590 ORTHO05D002763 4.8e-24 115.9 174 37.9
ECA238G1257 Erigeron canadensis HOM05D002590 ORTHO05D002763 6.3e-24 115.5 258 31.8
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.8e-23 114.0 175 37.7
HanXRQChr09g0262881 Helianthus annuus HOM05D002590 ORTHO05D002763 4.1e-23 112.8 174 36.2
arahy.Tifrunner.gnm1.ann1.U2GM3Q Arachis hypogaea HOM05D002590 ORTHO05D002763 9.1e-23 111.7 200 34.0
Os11g0621300 Oryza sativa ssp. japonica HOM05D002590 ORTHO05D002763 1.2e-22 111.3 178 34.3
Actinidia36377 Actinidia chinensis HOM05D002590 ORTHO05D002763 4.5e-22 109.4 154 40.9
Phvul.008G184500 Phaseolus vulgaris HOM05D002590 ORTHO05D002763 7.7e-22 108.6 172 39.0
Lsat_1_v5_gn_4_158180 Lactuca sativa HOM05D002590 ORTHO05D002763 1.3e-21 107.8 189 38.6
Hund17247 Selenicereus undatus HOM05D002590 ORTHO05D002763 2.5e-20 103.6 176 32.4
HanXRQChr14g0447071 Helianthus annuus HOM05D002590 ORTHO05D002763 3.2e-20 103.2 160 38.1
CSS0020341 Camellia sinensis var. sinensis HOM05D002590 ORTHO05D002763 1.2e-19 101.3 155 40.0
AUR62019077 Chenopodium quinoa HOM05D002590 ORTHO05D002763 1.2e-19 101.3 189 33.3
Zm00001eb166550 Zea mays HOM05D002590 ORTHO05D002763 6.1e-19 99.0 268 28.4
Gohir.A06G074100 Gossypium hirsutum HOM05D002590 ORTHO05D002763 1.8e-18 97.4 164 34.8
Gorai.010G085100 Gossypium raimondii HOM05D002590 ORTHO05D002763 2.3e-18 97.1 164 34.8
Actinidia04117 Actinidia chinensis HOM05D002590 ORTHO05D012270 6.7e-18 95.5 120 40.8
AUR62014334 Chenopodium quinoa HOM05D002590 ORTHO05D002763 2.2e-16 90.5 120 37.5
Peaxi162Scf00703g00231 Petunia axillaris HOM05D002590 ORTHO05D002763 2.2e-16 90.5 155 36.8
FAN04G1356 Fragaria x ananassa HOM05D002590 ORTHO05D002763 5.3e-15 85.9 85 45.9
EL10Ac1g00686 Beta vulgaris HOM05D002590 ORTHO05D002763 1.6e-14 84.3 197 30.5
Duzib093G1484 Durio zibethinus HOM05D002590 ORTHO05D002763 1.0e-13 81.6 189 29.6
SEGI_10955 Sequoiadendron giganteum HOM05D002590 ORTHO05D002763 1.7e-08 64.3 281 26.3
Sabra02G0085700 Salix brachista HOM05D002590 ORTHO05D002763 1.1e-07 61.6 94 36.2
SEGI_29249 Sequoiadendron giganteum HOM05D006915 ORTHO05D002763 1.2e-06 58.2 102 35.3


User provided reference genes

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