Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 4.9e-96 355.9 287 100.0
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 2.8e-67 260.4 237 91.6
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 3.7e-19 100.5 258 55.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 2.3e-16 91.3 112 48.2
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 8.6e-16 89.4 154 40.9
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 9.5e-15 85.9 138 40.6
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 9.5e-15 85.9 99 50.5
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.8e-13 81.6 130 40.8
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.8e-13 81.6 130 40.8
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 8.9e-13 79.3 99 47.5
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 8.9e-13 79.3 96 45.8
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 8.9e-13 79.3 202 54.0
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.2e-12 79.0 149 35.6
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.2e-12 79.0 152 34.9
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 1.5e-12 78.6 93 51.6
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 1.3e-11 75.5 101 45.5
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.7e-11 75.1 157 39.5
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 1.7e-11 75.1 121 38.0
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 1.7e-11 75.1 154 55.8
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 2.2e-11 74.7 158 56.3
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 2.9e-11 74.3 99 48.5
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 2.9e-11 74.3 96 46.9
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 3.7e-11 73.9 103 47.6
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 6.4e-11 73.2 96 49.0
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 6.4e-11 73.2 116 37.1
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 6.4e-11 73.2 97 43.3
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 8.3e-11 72.8 154 59.7
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 1.1e-10 72.4 99 47.5
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.1e-10 72.4 99 47.5
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 1.1e-10 72.4 102 46.1
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 1.1e-10 72.4 153 37.3
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.1e-10 72.4 103 45.6
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 1.4e-10 72.0 103 43.7
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.4e-10 72.0 96 44.8
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 1.4e-10 72.0 99 46.5
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 1.8e-10 71.6 98 44.9
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 2.4e-10 71.2 171 35.1
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 2.4e-10 71.2 217 52.1
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 2.4e-10 71.2 51 68.6
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 3.2e-10 70.9 113 42.5
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 4.1e-10 70.5 240 53.3
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 5.4e-10 70.1 98 43.9
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 7.0e-10 69.7 96 44.8
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 7.0e-10 69.7 100 47.0
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 9.2e-10 69.3 98 45.9
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 9.2e-10 69.3 102 45.1
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 9.2e-10 69.3 93 46.2
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 1.6e-09 68.6 105 41.9
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.7e-09 67.8 88 50.0
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 3.5e-09 67.4 51 66.7
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 4.6e-09 67.0 97 42.3
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 4.6e-09 67.0 94 44.7
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 4.6e-09 67.0 164 54.9
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 4.6e-09 67.0 59 55.9
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 5.9e-09 66.6 57 57.9
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 7.8e-09 66.2 110 40.0
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 7.8e-09 66.2 93 41.9
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 1.0e-08 65.9 164 53.7
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 1.0e-08 65.9 176 51.7
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 1.3e-08 65.5 95 42.1
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.7e-08 65.1 99 44.4
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.7e-08 65.1 60 56.7
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 2.3e-08 64.7 175 30.9
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 3.9e-08 63.9 157 56.1
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 3.9e-08 63.9 159 55.3
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 3.9e-08 63.9 51 62.7
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 5.0e-08 63.5 179 29.1
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 5.0e-08 63.5 179 29.1
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 6.6e-08 63.2 190 58.9
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 1.1e-07 62.4 114 37.7
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.5e-07 62.0 41 73.2
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.9e-07 61.6 89 40.4
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.3e-07 60.8 179 41.3
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 3.3e-07 60.8 90 43.3
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 3.3e-07 60.8 154 57.8
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.3e-07 60.8 94 40.4
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 4.3e-07 60.5 55 56.4
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 7.3e-07 59.7 55 56.4
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 7.3e-07 59.7 154 57.1
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 7.3e-07 59.7 154 57.1
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 9.5e-07 59.3 161 31.7
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.1e-06 58.2 96 42.7
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 2.1e-06 58.2 100 44.0
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 2.8e-06 57.8 107 35.5
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 2.8e-06 57.8 107 35.5
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 3.6e-06 57.4 91 41.8
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 6.2e-06 56.6 49 57.1
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 8.0e-06 56.2 194 52.1


User provided reference genes

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