Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 3.0e-205 718.4 384 100.0
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 6.3e-115 418.3 394 63.5
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.4e-24 118.2 427 30.2
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 4.1e-21 106.7 367 30.5
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 2.7e-17 94.0 430 27.4
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.8e-16 91.3 274 31.4
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 7.4e-15 85.9 419 27.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 9.7e-15 85.5 419 27.2
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.4e-13 81.6 325 26.8
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 9.1e-13 79.0 121 42.1
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-12 78.6 270 28.1
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.6e-12 78.2 326 27.3
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 2.6e-12 77.4 328 28.7
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 7.7e-12 75.9 270 29.6
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 7.7e-12 75.9 398 24.9
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 1.0e-11 75.5 262 31.3
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 1.7e-11 74.7 288 27.8
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 1.7e-11 74.7 353 27.5
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.7e-11 74.7 326 26.4
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 2.2e-11 74.3 309 30.1
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 6.5e-11 72.8 331 27.2
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 1.1e-10 72.0 56 64.3
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.1e-10 72.0 426 26.5
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 3.2e-10 70.5 104 44.2
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 3.2e-10 70.5 408 26.2
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 5.5e-10 69.7 215 30.2
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 7.2e-10 69.3 117 40.2
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 7.2e-10 69.3 47 72.3
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 1.2e-09 68.6 142 37.3
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.6e-09 68.2 122 40.2
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 2.1e-09 67.8 215 31.6
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.1e-09 67.8 50 66.0
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 3.6e-09 67.0 100 42.0
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 3.6e-09 67.0 274 31.0
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 4.7e-09 66.6 205 31.7
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 6.1e-09 66.2 377 28.6
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 1.4e-08 65.1 413 24.0
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 2.3e-08 64.3 275 29.8
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 3.0e-08 63.9 257 28.4
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 4.0e-08 63.5 110 43.6
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.0e-08 63.5 409 25.4
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 5.2e-08 63.2 273 29.3
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 5.2e-08 63.2 200 34.0
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 6.7e-08 62.8 324 24.4
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 6.7e-08 62.8 407 25.8
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.5e-07 61.6 207 31.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.3e-07 60.5 153 37.3
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 3.3e-07 60.5 61 54.1
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 5.7e-07 59.7 56 55.4
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 7.5e-07 59.3 369 24.9
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 9.7e-07 58.9 143 34.3
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 9.7e-07 58.9 179 30.2
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 1.3e-06 58.5 414 25.4
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.7e-06 58.2 398 25.1
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 2.2e-06 57.8 188 28.2
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 2.2e-06 57.8 223 29.1
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 2.2e-06 57.8 336 25.3
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 4.8e-06 56.6 123 36.6
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 6.3e-06 56.2 261 28.0
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 6.3e-06 56.2 371 24.5
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 8.2e-06 55.8 150 34.7


User provided reference genes

Program Settings