Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0036 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 0.0e+00 1535.4 799 100.0
CDE07G0717 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 0.0e+00 1204.9 801 80.5
Nn4g22404 Nelumbo nucifera HOM05D003830 ORTHO05D004446 9.2e-76 289.3 837 33.3
TAR622G0818 Trochodendron aralioides HOM05D003830 ORTHO05D004446 2.7e-75 287.7 850 32.5
TAR374G0580 Trochodendron aralioides HOM05D003830 ORTHO05D004446 2.3e-74 284.6 838 33.1
Aqoxy3G01454 Aquilegia oxysepala HOM05D003830 ORTHO05D004446 1.9e-73 281.6 828 31.6
Nn3g16538 Nelumbo nucifera HOM05D003830 ORTHO05D004446 1.2e-72 278.9 856 31.5
GSVIVG01010345001 Vitis vinifera HOM05D003830 ORTHO05D004446 2.8e-72 277.7 844 31.5
Manes.13G015800 Manihot esculenta HOM05D003830 ORTHO05D004446 2.3e-71 274.6 837 32.4
TAR629G0808 Trochodendron aralioides HOM05D003830 ORTHO05D004446 9.9e-70 269.2 836 32.3
FAN17G1537 Fragaria x ananassa HOM05D003830 ORTHO05D004446 2.9e-69 267.7 870 31.1
FvH4_4g24320 Fragaria vesca HOM05D003830 ORTHO05D004446 3.8e-69 267.3 867 31.7
FAN12G3820 Fragaria x ananassa HOM05D003830 ORTHO05D004446 8.4e-69 266.2 867 31.5
MBI08_g41743_MAGBIO Magnolia biondii HOM05D003830 ORTHO05D004446 2.4e-68 264.6 828 31.8
Thecc.02G274300 Theobroma cacao HOM05D003830 ORTHO05D004446 9.2e-68 262.7 836 30.1
Dinv10992 Davidia involucrata HOM05D003830 ORTHO05D004446 1.6e-67 261.9 825 31.4
Manes.12G014700 Manihot esculenta HOM05D003830 ORTHO05D004446 2.1e-67 261.5 840 29.9
CSS0000134 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 5.1e-66 256.9 829 30.2
Prupe.1G233200 Prunus persica HOM05D003830 ORTHO05D004446 5.1e-66 256.9 844 30.3
Atru.chr11.2246 Acer truncatum HOM05D003830 ORTHO05D004446 6.6e-66 256.5 840 31.2
Atru.chr11.2261 Acer truncatum HOM05D003830 ORTHO05D004446 6.6e-66 256.5 832 31.2
QL03p054734 Quercus lobata HOM05D003830 ORTHO05D004446 1.2e-64 252.3 839 30.4
FAN22G2024 Fragaria x ananassa HOM05D003830 ORTHO05D004446 2.1e-64 251.5 864 30.9
CiPaw.05G115100 Carya illinoinensis HOM05D003830 ORTHO05D004446 2.8e-64 251.1 834 31.1
Duzib251G0504 Durio zibethinus HOM05D003830 ORTHO05D004446 4.7e-64 250.4 834 31.2
TWI75G0226 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 8.1e-64 249.6 826 30.9
Duzib268G1283 Durio zibethinus HOM05D003830 ORTHO05D004446 9.0e-63 246.1 822 29.8
COL.COLO4_23621 Corchorus olitorius HOM05D003830 ORTHO05D004446 1.2e-62 245.7 817 30.4
RcHm_v2.0_Chr4g0431121 Rosa chinensis HOM05D003830 ORTHO05D004446 5.8e-62 243.4 853 30.4
Ciclev10030548m.g Citrus clementina HOM05D003830 ORTHO05D004446 2.2e-61 241.5 848 29.5
Sed0027794 Sechium edule HOM05D003830 ORTHO05D004446 1.2e-59 235.7 839 29.4
Cfa009315 Carpinus fangiana HOM05D003830 ORTHO05D008363 1.6e-59 235.3 838 29.0
Potri.008G178600 Populus trichocarpa HOM05D003830 ORTHO05D004446 6.0e-59 233.4 828 30.2
Gohir.D02G152400 Gossypium hirsutum HOM05D003830 ORTHO05D004446 7.8e-59 233.0 824 29.5
PSO063G3359 Papaver somniferum HOM05D003830 ORTHO05D004446 8.7e-58 229.6 828 30.0
Duzib248G1684 Durio zibethinus HOM05D003830 ORTHO05D004446 1.1e-57 229.2 838 28.8
Gorai.005G171400 Gossypium raimondii HOM05D003830 ORTHO05D004446 1.5e-57 228.8 818 28.6
MELO3C010729.2 Cucumis melo HOM05D003830 ORTHO05D004446 1.9e-57 228.4 821 30.5
MD16G1111800 Malus domestica HOM05D003830 ORTHO05D004446 4.3e-57 227.3 870 29.9
Actinidia25761 Actinidia chinensis HOM05D003830 ORTHO05D004446 5.6e-57 226.9 834 30.3
CsaV3_2G025330 Cucumis sativus L. HOM05D003830 ORTHO05D004446 1.3e-56 225.7 829 31.7
Dinv14800 Davidia involucrata HOM05D003830 ORTHO05D004446 1.3e-56 225.7 785 28.5
ClCG08G017300 Citrullus lanatus HOM05D003830 ORTHO05D004446 2.1e-56 224.9 837 30.6
Gohir.A03G128600 Gossypium hirsutum HOM05D003830 ORTHO05D004446 3.6e-56 224.2 823 28.6
Glyma.18G009000 Glycine max HOM05D003830 ORTHO05D004446 1.1e-55 222.6 847 30.1
CANSAT01G2001 Cannabis sativa HOM05D003830 ORTHO05D004446 1.4e-55 222.2 860 28.8
Rhsim12G0030500 Rhododendron simsii HOM05D003830 ORTHO05D004446 2.4e-55 221.5 842 29.2
Cpa.g.c26951.1 Carica papaya HOM05D003830 ORTHO05D004446 5.3e-55 220.3 829 29.3
arahy.Tifrunner.gnm1.ann1.ZS76EK Arachis hypogaea HOM05D003830 ORTHO05D004446 6.9e-55 219.9 864 30.3
Potri.010G056200 Populus trichocarpa HOM05D003830 ORTHO05D004446 1.2e-54 219.2 842 29.5
Glyma.11G248200 Glycine max HOM05D003830 ORTHO05D004446 1.5e-54 218.8 835 30.1
Sabra10G0048900 Salix brachista HOM05D003830 ORTHO05D004446 2.6e-54 218.0 842 29.2
Cc11_g16600 Coffea canephora HOM05D003830 ORTHO05D004446 7.6e-54 216.5 859 29.2
Phvul.002G176100 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 7.6e-54 216.5 854 28.8
arahy.Tifrunner.gnm1.ann1.D6D033 Arachis hypogaea HOM05D003830 ORTHO05D004446 1.7e-53 215.3 850 30.6
Sabra08G0136300 Salix brachista HOM05D003830 ORTHO05D004446 2.2e-53 214.9 852 29.7
PSO782G2541 Papaver somniferum HOM05D003830 ORTHO05D004446 3.8e-53 214.2 825 28.6
vmacro01085 Vaccinium macrocarpon HOM05D003830 ORTHO05D004446 3.8e-53 214.2 884 28.6
MD13G1112200 Malus domestica HOM05D003830 ORTHO05D004446 1.9e-52 211.8 875 29.5
TWI18G0501 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 2.4e-52 211.5 823 30.0
arahy.Tifrunner.gnm1.ann1.MTFP9U Arachis hypogaea HOM05D003830 ORTHO05D004446 1.2e-51 209.1 834 29.3
VMungo0251G0774 Vigna mungo HOM05D003830 ORTHO05D004446 1.3e-50 205.7 861 29.2
PGR102G1232 Punica granatum HOM05D003830 ORTHO05D004446 8.7e-50 203.0 841 29.7
Oeu041685.1 Olea europaea HOM05D003830 ORTHO05D004446 1.1e-49 202.6 832 29.3
TPR.G22439 Trifolium pratense HOM05D003830 ORTHO05D004446 1.9e-49 201.8 864 28.2
Oeu038669.1 Olea europaea HOM05D003830 ORTHO05D004446 1.3e-48 199.1 834 29.4
Phvul.001G259600 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 1.6e-48 198.7 834 30.1
MSTRG.524 Avicennia marina HOM05D003830 ORTHO05D004446 5.3e-47 193.7 826 28.2
Peaxi162Scf00128g00924 Petunia axillaris HOM05D003830 ORTHO05D004446 1.2e-46 192.6 827 28.7
Hma1.2p1_0167F.1_g073780 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 1.5e-46 192.2 834 27.8
Ca_16482_v3 Cicer arietinum L. HOM05D003830 ORTHO05D004446 2.6e-46 191.4 863 27.3
Hma1.2p1_1340F.1_g276750 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 5.8e-46 190.3 831 28.3
TWI36G0084 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 2.2e-45 188.3 830 28.4
arahy.Tifrunner.gnm1.ann1.JB8DT0 Arachis hypogaea HOM05D003830 ORTHO05D004446 3.8e-45 187.6 843 27.9
Eucgr.H04665 Eucalyptus grandis HOM05D003830 ORTHO05D004446 3.8e-45 187.6 849 30.0
Glyma.05G145400 Glycine max HOM05D003830 ORTHO05D004446 3.8e-45 187.6 875 28.1
AUR62024159 Chenopodium quinoa HOM05D003830 ORTHO05D004446 1.1e-44 186.0 827 27.8
VMungo1383G3029 Vigna mungo HOM05D003830 ORTHO05D004446 2.4e-44 184.9 840 29.2
Lalb_Chr23g0277961 Lupinus albus HOM05D003830 ORTHO05D004446 5.5e-44 183.7 850 28.4
Nitab4.5_0011772g0020 Nicotiana tabacum HOM05D003830 ORTHO05D004446 5.5e-44 183.7 824 27.3
AUR62005571 Chenopodium quinoa HOM05D003830 ORTHO05D004446 1.2e-43 182.6 829 28.1
Sopen05g009770 Solanum pennellii HOM05D003830 ORTHO05D004446 2.1e-43 181.8 832 28.6
Nitab4.5_0000240g0070 Nicotiana tabacum HOM05D003830 ORTHO05D004446 2.7e-43 181.4 831 27.3
Lalb_Chr08g0230701 Lupinus albus HOM05D003830 ORTHO05D004446 6.0e-43 180.3 841 27.5
PGSC0003DMG400017461 Solanum tuberosum HOM05D003830 ORTHO05D004446 1.3e-42 179.1 852 27.8
SalBow2G2689 Salvia bowleyana HOM05D003830 ORTHO05D004446 3.0e-42 177.9 817 27.1
EL10Ac6g13438 Beta vulgaris HOM05D003830 ORTHO05D004446 3.9e-42 177.6 827 27.0
Lj4g0001101 Lotus japonicus HOM05D003830 ORTHO05D004446 5.1e-42 177.2 835 29.1
Glyma.08G102200 Glycine max HOM05D003830 ORTHO05D004446 8.7e-42 176.4 872 27.9
CAN.G692.1 Capsicum annuum HOM05D003830 ORTHO05D004446 1.9e-41 175.3 836 28.2
Solyc05g014640.3 Solanum lycopersicum HOM05D003830 ORTHO05D004446 1.9e-41 175.3 837 28.8
Sc11g0000660 Simmondsia chinensis HOM05D003830 ORTHO05D004446 2.5e-41 174.9 842 28.5
Oeu056685.2 Olea europaea HOM05D003830 ORTHO05D004446 4.3e-41 174.1 854 26.1
DCAR_024085 Daucus carota HOM05D003830 ORTHO05D004446 1.8e-39 168.7 854 27.9
Lalb_Chr11g0075701 Lupinus albus HOM05D003830 ORTHO05D004446 5.3e-39 167.2 850 27.5
MSTRG.7981 Avicennia marina HOM05D003830 ORTHO05D004446 6.9e-39 166.8 823 27.0
DCAR_013711 Daucus carota HOM05D003830 ORTHO05D004446 2.0e-38 165.2 856 28.2
HPP92_004598 Vanilla planifolia HOM05D003830 ORTHO05D004446 7.6e-38 163.3 841 27.2
Rhsim12G0031400 Rhododendron simsii HOM05D003830 ORTHO05D004446 4.9e-37 160.6 548 30.7
Os12g0239200 Oryza sativa ssp. japonica HOM05D003830 ORTHO05D004446 6.5e-37 160.2 849 27.7
Zm00001eb409890 Zea mays HOM05D003830 ORTHO05D004446 3.9e-34 151.0 842 27.0
Migut.K00697 Erythranthe guttata HOM05D003830 ORTHO05D004446 6.7e-34 150.2 833 27.9
Os12g0239000 Oryza sativa ssp. japonica HOM05D003830 ORTHO05D004446 1.9e-33 148.7 848 26.3
Migut.E00239 Erythranthe guttata HOM05D003830 ORTHO05D004446 2.5e-33 148.3 809 27.3
ECA234G2423 Erigeron canadensis HOM05D003830 ORTHO05D004446 9.7e-33 146.4 807 26.6
SalBow8G5205 Salvia bowleyana HOM05D003830 ORTHO05D004446 2.1e-27 128.6 811 25.0
Hund06065 Selenicereus undatus HOM05D003830 ORTHO05D004446 8.7e-26 123.2 860 25.6
DCAR_007014 Daucus carota HOM05D003830 ORTHO05D004446 7.4e-25 120.2 848 24.6
Lj6C822T9 Lonicera japonica HOM05D003830 ORTHO05D004446 2.2e-24 118.6 681 25.1
CSS0032396 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 4.8e-24 117.5 558 28.5
CARHR027310 Cardamine hirsuta HOM05D003830 ORTHO05D004446 1.1e-23 116.3 842 26.0
ECA233G0646 Erigeron canadensis HOM05D003830 ORTHO05D004446 2.4e-23 115.2 723 25.7
Sp1g24060 Schrenkiella parvula HOM05D003830 ORTHO05D004446 5.3e-23 114.0 848 24.8
HanXRQChr08g0207491 Helianthus annuus HOM05D003830 ORTHO05D004446 3.4e-22 111.3 817 25.5
Aa31sc109G20 Aethionema arabicum HOM05D003830 ORTHO05D004446 4.5e-22 110.9 839 24.4
Actinidia30673 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.7e-21 109.0 427 27.2
Thhalv10006616m.g Eutrema salsugineum HOM05D003830 ORTHO05D004446 1.7e-21 109.0 840 25.4
CDE05G3292 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 2.2e-21 108.6 65 86.2
THA.LOC104825519 Tarenaya hassleriana HOM05D003830 ORTHO05D004446 1.4e-20 105.9 813 24.4
BcaC05g26779 Brassica carinata HOM05D003830 ORTHO05D004446 9.4e-20 103.2 844 24.6
Psat5g094600 Pisum sativum HOM05D003830 ORTHO05D004446 2.1e-19 102.1 832 24.4
BraA09t39341Z Brassica rapa HOM05D003830 ORTHO05D004446 6.1e-19 100.5 829 24.8
Actinidia33257 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.8e-18 99.0 700 25.3
A09p38310 Brassica napus HOM05D003830 ORTHO05D004446 2.3e-18 98.6 829 24.6
Zm00001eb133500 Zea mays HOM05D003830 ORTHO05D004446 2.3e-18 98.6 829 24.7
Lj6C822T10 Lonicera japonica HOM05D003830 ORTHO05D004446 5.1e-18 97.4 133 42.1
ATR0609G075 Amborella trichopoda HOM05D003830 ORTHO05D004446 1.1e-17 96.3 468 28.2
AT1G27850 Arabidopsis thaliana HOM05D003830 ORTHO05D004446 1.1e-17 96.3 839 24.0
Actinidia30674 Actinidia chinensis HOM05D003830 ORTHO05D004446 2.0e-17 95.5 177 36.2
C05p26490 Brassica napus HOM05D003830 ORTHO05D004446 2.6e-17 95.1 837 24.7
BolC5t31369H Brassica oleracea HOM05D003830 ORTHO05D004446 3.3e-17 94.7 843 24.4
Carub.0001s2631 Capsella rubella HOM05D003830 ORTHO05D004446 3.7e-16 91.3 870 22.9
BcaC05g26601 Brassica carinata HOM05D003830 ORTHO05D004446 1.1e-15 89.7 301 29.6
Lsat_1_v5_gn_4_2860 Lactuca sativa HOM05D003830 ORTHO05D004446 1.1e-15 89.7 363 30.0
SEGI_06277 Sequoiadendron giganteum HOM05D003830 ORTHO05D004446 1.8e-15 89.0 884 23.1
unitig_747.g21131 Utricularia gibba HOM05D003830 ORTHO05D004446 5.3e-15 87.4 814 24.6
Zm00001eb133580 Zea mays HOM05D003830 ORTHO05D004446 5.3e-15 87.4 803 25.0
SGA_v2.0_scaffold87G27127 Striga asiatica HOM05D003830 ORTHO05D004446 6.9e-15 87.0 207 34.8
CDE02G1696 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 1.2e-14 86.3 203 35.0
A08p26030 Brassica napus HOM05D003830 ORTHO05D004446 7.7e-14 83.6 541 26.4
BraA08t34553Z Brassica rapa HOM05D003830 ORTHO05D004446 7.7e-14 83.6 543 25.6
FAN07G1399 Fragaria x ananassa HOM05D003830 ORTHO05D004446 1.3e-13 82.8 140 43.6
AL1G41340 Arabidopsis lyrata HOM05D003830 ORTHO05D004446 1.7e-13 82.4 833 23.9
BcaNung07311 Brassica carinata HOM05D003830 ORTHO05D004446 1.4e-12 79.3 547 26.0
HanXRQChr17g0569161 Helianthus annuus HOM05D003830 ORTHO05D004446 4.2e-12 77.8 818 24.2
BolC3t19710H Brassica oleracea HOM05D003830 ORTHO05D004446 3.6e-11 74.7 838 23.9
SGA_v2.0_scaffold391G50642 Striga asiatica HOM05D003830 ORTHO05D004446 3.6e-11 74.7 467 27.0
Lsat_1_v5_gn_8_150260 Lactuca sativa HOM05D003830 ORTHO05D004446 4.7e-11 74.3 210 27.6
FAN07G1859 Fragaria x ananassa HOM05D003830 ORTHO05D004446 1.0e-10 73.2 113 41.6
C03p74620 Brassica napus HOM05D003830 ORTHO05D004446 2.3e-10 72.0 841 22.4
HPP92_006184 Vanilla planifolia HOM05D003830 ORTHO05D004446 1.5e-09 69.3 185 34.1
SHI17938 Sapria himalayana HOM05D003830 ORTHO05D004446 3.3e-09 68.2 161 30.4
BcaC05g26769 Brassica carinata HOM05D003830 ORTHO05D004446 2.8e-08 65.1 152 35.5


User provided reference genes

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