Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 1.3e-115 419.9 226 100.0
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 5.0e-51 205.3 206 59.7
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 3.5e-49 199.1 200 58.5
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 1.8e-48 196.8 199 59.8
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 4.2e-42 175.6 202 52.0
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 9.4e-42 174.5 198 57.1
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 1.8e-40 170.2 190 53.2
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 2.3e-40 169.9 202 53.5
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 2.5e-39 166.4 219 47.9
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 3.3e-39 166.0 194 52.6
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 7.4e-39 164.9 213 50.2
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 7.4e-39 164.9 197 51.3
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 7.4e-39 164.9 202 51.0
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 9.7e-39 164.5 198 51.0
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 9.7e-39 164.5 197 51.3
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.3e-38 164.1 192 51.6
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 2.8e-38 162.9 200 51.5
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 3.7e-38 162.5 202 50.5
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 6.3e-38 161.8 212 47.6
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 9.1e-37 157.9 211 48.3
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 2.0e-36 156.8 208 48.6
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 3.4e-36 156.0 200 48.5
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 3.4e-36 156.0 200 49.5
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 4.5e-36 155.6 198 52.0
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 4.5e-36 155.6 220 45.0
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 1.7e-35 153.7 201 46.8
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 1.7e-35 153.7 195 47.2
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 2.2e-35 153.3 203 47.3
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 2.9e-35 152.9 208 46.6
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 2.9e-35 152.9 196 48.5
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 3.8e-35 152.5 199 47.2
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 5.0e-35 152.1 193 49.7
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 5.0e-35 152.1 215 47.0
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 5.0e-35 152.1 216 46.3
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 6.5e-35 151.8 196 48.5
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 6.5e-35 151.8 194 49.5
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 1.4e-34 150.6 199 46.7
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 1.9e-34 150.2 199 47.7
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 2.5e-34 149.8 195 45.6
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 3.2e-34 149.4 201 47.3
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 3.2e-34 149.4 198 44.4
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 4.2e-34 149.1 196 46.9
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 4.2e-34 149.1 196 46.9
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 4.2e-34 149.1 196 46.4
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 4.2e-34 149.1 192 50.0
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 4.2e-34 149.1 199 46.2
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 5.5e-34 148.7 213 45.1
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 7.2e-34 148.3 202 46.0
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 7.2e-34 148.3 175 53.1
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 7.2e-34 148.3 207 44.4
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 9.4e-34 147.9 198 47.0
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 9.4e-34 147.9 202 46.0
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 1.6e-33 147.1 194 43.3
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 1.6e-33 147.1 197 47.7
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 3.6e-33 146.0 202 45.5
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 4.7e-33 145.6 215 44.2
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 4.7e-33 145.6 194 46.9
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 6.1e-33 145.2 201 48.8
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 7.9e-33 144.8 195 45.1
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 7.9e-33 144.8 195 45.1
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 1.0e-32 144.4 214 45.3
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 1.4e-32 144.1 197 48.2
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 1.8e-32 143.7 212 44.3
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 1.8e-32 143.7 209 41.6
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 3.0e-32 142.9 209 44.5
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 3.9e-32 142.5 212 45.3
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 3.9e-32 142.5 216 44.4
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 5.1e-32 142.1 194 45.4
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 6.7e-32 141.7 190 48.4
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 6.7e-32 141.7 200 45.5
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 8.8e-32 141.4 200 45.5
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 1.1e-31 141.0 213 43.7
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.1e-31 141.0 203 46.3
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 1.5e-31 140.6 212 43.4
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 2.0e-31 140.2 202 44.1
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 5.7e-31 138.7 205 44.9
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 7.4e-31 138.3 206 45.1
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 7.4e-31 138.3 200 43.5
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 9.7e-31 137.9 214 44.4
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 1.7e-30 137.1 204 43.1
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 3.7e-30 136.0 219 42.0
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 6.3e-30 135.2 212 43.4
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 1.4e-29 134.0 190 48.4
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.8e-29 133.7 191 48.7
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.8e-29 133.7 190 48.4
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 2.4e-29 133.3 215 43.7
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 3.1e-29 132.9 190 46.8
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 4.1e-29 132.5 212 40.1
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 5.3e-29 132.1 190 48.9
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 7.0e-29 131.7 190 48.9
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 9.1e-29 131.3 251 39.4
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 9.1e-29 131.3 197 43.1
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 2.0e-28 130.2 190 46.8
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 4.5e-28 129.0 208 43.8
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 4.5e-28 129.0 185 45.9
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 5.9e-28 128.6 190 44.7
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 1.3e-27 127.5 163 52.1
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 1.3e-27 127.5 215 42.8
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 3.8e-27 125.9 201 40.8
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 5.0e-27 125.6 213 40.4
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 3.2e-26 122.9 214 42.5
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 9.4e-26 121.3 198 41.4
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 1.2e-25 120.9 190 43.7
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.6e-25 120.6 196 42.3
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 4.7e-25 119.0 190 44.7
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 6.1e-25 118.6 180 42.8
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 1.0e-24 117.9 170 44.7
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 7.5e-23 111.7 195 41.0
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 1.2e-20 104.4 253 34.0
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 8.0e-17 91.7 134 44.8
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 1.4e-16 90.9 138 42.8
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 7.5e-15 85.1 114 40.4
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 4.8e-14 82.4 177 34.5
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 1.8e-13 80.5 206 35.9
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 4.1e-13 79.3 68 61.8
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 9.1e-13 78.2 85 57.6
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 2.2e-11 73.6 114 43.0
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.2e-11 73.6 83 51.8
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 1.9e-10 70.5 284 28.9
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.6e-09 67.4 142 35.9
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 2.7e-09 66.6 208 29.3
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 2.7e-09 66.6 57 59.6


User provided reference genes

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