Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 6.0e-114 414.5 254 100.0
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 2.3e-49 199.9 230 61.7
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 8.9e-49 198.0 230 61.3
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 5.0e-44 182.2 245 53.1
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 4.3e-43 179.1 231 57.6
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 1.2e-42 177.6 220 56.8
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 6.8e-41 171.8 208 59.1
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 2.0e-40 170.2 232 57.3
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 2.0e-40 170.2 227 45.4
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 2.0e-40 170.2 236 53.8
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 3.4e-40 169.5 214 56.1
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 3.4e-40 169.5 239 47.3
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 5.8e-40 168.7 224 56.2
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 5.8e-40 168.7 233 55.8
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 3.7e-39 166.0 204 46.6
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 4.9e-39 165.6 254 42.1
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 4.9e-39 165.6 233 54.9
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 4.9e-39 165.6 233 54.9
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 8.3e-39 164.9 224 55.8
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 8.3e-39 164.9 227 54.2
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 1.4e-38 164.1 196 60.2
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 1.4e-38 164.1 199 47.2
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 3.2e-38 162.9 200 59.5
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 3.2e-38 162.9 206 58.3
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 3.2e-38 162.9 257 52.5
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 4.1e-38 162.5 207 57.5
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 4.1e-38 162.5 257 49.8
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 5.4e-38 162.2 257 50.6
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 2.7e-37 159.8 257 49.8
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 4.6e-37 159.1 257 49.4
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 6.0e-37 158.7 257 49.4
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 6.0e-37 158.7 257 49.4
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 7.8e-37 158.3 208 57.7
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 7.8e-37 158.3 235 44.3
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 7.8e-37 158.3 213 48.8
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 1.0e-36 157.9 207 48.3
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 1.0e-36 157.9 218 55.5
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 1.7e-36 157.1 257 49.8
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 1.7e-36 157.1 220 52.7
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 3.0e-36 156.4 209 56.0
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 3.0e-36 156.4 229 44.5
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 3.9e-36 156.0 254 49.2
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 5.1e-36 155.6 207 56.0
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 6.6e-36 155.2 258 38.4
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 8.6e-36 154.8 220 49.5
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 1.1e-35 154.5 196 56.1
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.1e-35 154.5 259 37.8
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 2.5e-35 153.3 226 44.7
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 4.3e-35 152.5 206 45.6
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 4.3e-35 152.5 244 41.8
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 5.6e-35 152.1 220 42.3
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 5.6e-35 152.1 233 53.2
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 9.5e-35 151.4 232 44.4
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 1.2e-34 151.0 226 47.8
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 1.6e-34 150.6 222 53.6
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 2.8e-34 149.8 223 44.4
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 3.6e-34 149.4 225 48.9
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 3.6e-34 149.4 225 48.9
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 3.6e-34 149.4 198 57.1
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 4.7e-34 149.1 258 49.2
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 6.2e-34 148.7 232 42.7
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 6.2e-34 148.7 232 42.7
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 1.1e-33 147.9 245 42.0
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.8e-33 147.1 225 48.9
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 2.3e-33 146.7 224 53.1
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 4.0e-33 146.0 230 49.6
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 5.2e-33 145.6 205 47.3
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 5.2e-33 145.6 244 49.2
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 5.2e-33 145.6 224 52.7
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 1.2e-32 144.4 206 55.8
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.2e-32 144.4 225 52.9
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.5e-32 144.1 225 42.7
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 1.5e-32 144.1 231 52.4
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 2.0e-32 143.7 219 50.7
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 5.8e-32 142.1 253 40.7
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 5.8e-32 142.1 235 43.0
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 1.7e-31 140.6 225 54.2
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 2.2e-31 140.2 212 50.9
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 3.8e-31 139.4 223 41.3
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 1.1e-30 137.9 236 50.8
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 1.1e-30 137.9 222 48.6
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 3.2e-30 136.3 231 40.7
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 3.2e-30 136.3 214 52.8
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 9.2e-30 134.8 205 53.2
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 4.6e-29 132.5 157 47.8
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 4.6e-29 132.5 256 44.9
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 4.6e-29 132.5 205 53.2
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 6.0e-29 132.1 269 35.7
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 1.0e-28 131.3 242 48.8
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 1.3e-28 131.0 241 47.7
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 1.7e-28 130.6 204 52.9
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 3.9e-28 129.4 235 38.7
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 8.6e-28 128.3 223 49.3
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 2.5e-27 126.7 232 47.0
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 4.3e-27 125.9 231 39.0
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 4.3e-27 125.9 200 40.5
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 5.6e-27 125.6 234 36.3
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 7.3e-27 125.2 237 49.8
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 3.6e-26 122.9 263 43.7
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 1.1e-25 121.3 230 47.0
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.1e-25 121.3 255 45.1
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 2.4e-25 120.2 207 41.1
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.5e-24 117.5 253 43.9
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 2.0e-24 117.1 128 53.9
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 3.4e-24 116.3 143 51.7
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 4.9e-23 112.5 232 47.4
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 8.4e-23 111.7 219 47.0
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 3.2e-22 109.8 212 48.1
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 4.2e-22 109.4 208 49.0
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 1.6e-21 107.5 234 44.9
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 2.7e-21 106.7 226 35.4
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 2.7e-21 106.7 146 47.3
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 4.6e-21 105.9 143 46.9
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 7.8e-21 105.1 226 35.4
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 1.0e-20 104.8 192 47.4
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 1.0e-20 104.8 205 47.8
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 1.3e-20 104.4 142 47.2
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 6.6e-20 102.1 192 46.4
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 1.4e-17 94.4 226 43.8
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 5.3e-17 92.4 225 30.2
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 5.8e-16 89.0 210 31.4
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.3e-15 87.8 203 29.6
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 2.2e-15 87.0 132 43.9
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 1.9e-14 84.0 228 27.6
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 9.3e-14 81.6 211 28.9
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 4.6e-13 79.3 97 47.4
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.0e-12 78.2 184 28.8
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 1.5e-08 64.3 77 51.9
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 5.8e-08 62.4 213 25.8
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 7.6e-08 62.0 233 23.2
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 3.8e-07 59.7 56 53.6
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 1.1e-06 58.2 212 24.1
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 2.4e-06 57.0 47 59.6
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 5.5e-06 55.8 57 49.1
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 9.3e-06 55.1 57 49.1


User provided reference genes

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