Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 5.1e-221 770.8 388 100.0
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 3.9e-80 302.8 456 43.4
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 5.1e-80 302.4 421 43.0
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 8.7e-80 301.6 421 44.2
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 1.2e-76 291.2 460 41.7
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 2.0e-76 290.4 411 42.8
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 5.8e-76 288.9 413 42.4
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 7.6e-76 288.5 419 43.4
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.7e-75 287.3 452 42.0
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 2.2e-75 287.0 439 40.8
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.9e-75 286.6 446 40.1
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 4.9e-75 285.8 450 40.7
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 8.4e-75 285.0 448 39.7
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 8.4e-75 285.0 450 41.8
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.9e-74 283.9 474 39.9
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.9e-74 283.9 442 41.2
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.9e-74 283.9 427 42.4
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 3.2e-74 283.1 413 41.9
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 7.1e-74 282.0 448 42.2
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 7.1e-74 282.0 417 42.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 9.3e-74 281.6 417 42.7
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.2e-73 281.2 413 43.1
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.2e-73 281.2 447 39.6
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.2e-73 281.2 443 42.0
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 7.9e-73 278.5 425 42.1
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 7.9e-73 278.5 440 41.1
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.8e-72 277.3 419 43.9
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 2.3e-72 276.9 417 41.7
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.0e-72 276.6 454 39.2
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 5.1e-72 275.8 430 40.9
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 5.1e-72 275.8 449 40.1
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 8.7e-72 275.0 450 41.3
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 8.7e-72 275.0 459 40.3
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.1e-71 274.6 424 42.2
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.5e-71 274.2 413 42.4
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.5e-71 274.2 447 41.2
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.9e-71 273.9 461 40.6
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.9e-71 273.9 436 42.0
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 4.3e-71 272.7 417 41.5
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.3e-71 272.7 450 41.3
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 4.3e-71 272.7 441 39.5
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 5.7e-71 272.3 440 39.3
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 9.7e-71 271.6 467 39.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.6e-70 270.8 451 40.1
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 2.2e-70 270.4 433 40.6
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 4.8e-70 269.2 438 41.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 6.3e-70 268.9 444 39.0
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 8.2e-70 268.5 427 40.7
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.1e-69 268.1 449 38.3
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.1e-69 268.1 441 41.5
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.8e-69 267.3 449 39.9
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 3.1e-69 266.5 423 40.4
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 5.3e-69 265.8 425 39.5
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 9.0e-69 265.0 420 39.0
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.2e-68 264.6 425 39.3
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 2.0e-68 263.8 441 40.1
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.0e-68 263.8 426 39.9
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.4e-68 263.1 464 39.0
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 7.7e-68 261.9 415 40.2
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 1.0e-67 261.5 388 41.8
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 2.2e-67 260.4 428 40.0
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 3.8e-67 259.6 471 38.6
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 5.0e-67 259.2 469 36.9
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 3.2e-66 256.5 514 36.4
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 7.9e-65 251.9 417 39.1
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 6.3e-62 242.3 415 40.2
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 3.1e-61 240.0 392 40.6
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.3e-59 234.6 484 34.7
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 2.9e-59 233.4 484 34.7
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.2e-57 228.0 352 41.5
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 6.7e-56 222.2 411 36.5
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.7e-54 217.6 404 36.4
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.2e-54 217.2 414 35.7
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 3.7e-54 216.5 319 41.7
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 7.7e-52 208.8 410 37.8
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.1e-50 204.9 439 34.9
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 7.2e-50 202.2 434 35.3
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 9.4e-50 201.8 401 38.4
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 4.4e-47 193.0 341 38.4
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.7e-46 189.9 408 31.4
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 3.5e-44 183.3 214 45.8
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.9e-43 180.3 419 33.7
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.2e-42 176.8 375 32.5
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.2e-42 176.4 277 41.9
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.8e-40 171.0 475 29.1
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 3.4e-31 140.2 190 38.4
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 5.7e-31 139.4 205 44.4
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 2.2e-30 137.5 188 46.8
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.1e-29 135.2 340 31.2
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 5.9e-28 129.4 195 42.6
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 2.3e-27 127.5 175 42.3
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.8e-27 126.7 166 39.8
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.8e-27 126.7 166 39.8
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 5.5e-26 122.9 215 37.7
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 5.2e-24 116.3 204 39.7
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 9.8e-23 112.1 138 44.2
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 9.2e-21 105.5 233 33.0
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.3e-19 100.9 173 41.0
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 1.5e-18 98.2 182 40.1
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 5.6e-18 96.3 96 51.0
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.7e-14 84.7 67 59.7
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 3.0e-11 73.9 151 37.1
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.8e-08 64.7 112 42.9
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 4.4e-07 60.1 132 31.1


User provided reference genes

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