Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0363 Ceratophyllum demersum HOM05D000847 ORTHO05D007447 2.2e-89 332.4 189 100.0
CDE05G2545 Ceratophyllum demersum HOM05D000847 ORTHO05D007447 5.4e-27 125.2 87 71.3
TAR636G1233 Trochodendron aralioides HOM05D001241 ORTHO05D007447 3.8e-20 102.4 67 65.7
Nn2g11715 Nelumbo nucifera HOM05D000847 ORTHO05D007447 4.9e-20 102.1 67 64.2
Potri.001G183500 Populus trichocarpa HOM05D000847 ORTHO05D007447 1.1e-19 100.9 71 62.0
vmacro18895 Vaccinium macrocarpon HOM05D000847 ORTHO05D007447 1.4e-19 100.5 71 60.6
Sabra01G0144300 Salix brachista HOM05D000847 ORTHO05D007447 2.5e-19 99.8 71 60.6
TAR624G1412 Trochodendron aralioides HOM05D000847 ORTHO05D007447 2.5e-19 99.8 67 65.7
Rhsim08G0222900 Rhododendron simsii HOM05D000847 ORTHO05D007447 3.2e-19 99.4 71 60.6
GSVIVG01017063001 Vitis vinifera HOM05D000847 ORTHO05D007447 3.2e-19 99.4 71 60.6
Cfa002087 Carpinus fangiana HOM05D000847 ORTHO05D007447 5.5e-19 98.6 67 65.7
Haze_16372 Corylus avellana HOM05D000847 ORTHO05D007447 5.5e-19 98.6 67 65.7
Dinv30490 Davidia involucrata HOM05D000847 ORTHO05D007447 5.5e-19 98.6 67 64.2
Lj5C58T13 Lonicera japonica HOM05D000847 ORTHO05D007447 5.5e-19 98.6 67 61.2
Manes.04G128900 Manihot esculenta HOM05D000847 ORTHO05D007447 5.5e-19 98.6 69 59.4
CiPaw.01G236800 Carya illinoinensis HOM05D000847 ORTHO05D007447 7.1e-19 98.2 67 65.7
Gohir.A05G131300 Gossypium hirsutum HOM05D000847 ORTHO05D007447 9.3e-19 97.8 67 62.7
Gohir.D05G130800 Gossypium hirsutum HOM05D000847 ORTHO05D007447 9.3e-19 97.8 67 62.7
Gorai.009G134500 Gossypium raimondii HOM05D000847 ORTHO05D007447 9.3e-19 97.8 67 62.7
QL05p022088 Quercus lobata HOM05D000847 ORTHO05D007447 1.2e-18 97.4 71 62.0
ClCG07G013130 Citrullus lanatus HOM05D000847 ORTHO05D007447 2.1e-18 96.7 67 59.7
Peaxi162Scf00015g00038 Petunia axillaris HOM05D000847 ORTHO05D007447 2.1e-18 96.7 86 55.8
Cpa.g.sc852.1 Carica papaya HOM05D000847 ORTHO05D007447 2.7e-18 96.3 67 58.2
Sed0011994 Sechium edule HOM05D000847 ORTHO05D007447 2.7e-18 96.3 67 61.2
Nn8g39141 Nelumbo nucifera HOM05D000847 ORTHO05D007447 3.5e-18 95.9 71 59.2
ECA232G3820 Erigeron canadensis HOM05D000847 ORTHO05D007447 4.6e-18 95.5 72 62.5
MSTRG.22669 Avicennia marina HOM05D000847 ORTHO05D007447 6.0e-18 95.1 71 57.7
MELO3C012969.2 Cucumis melo HOM05D000847 ORTHO05D007447 6.0e-18 95.1 67 58.2
CsaV3_3G025020 Cucumis sativus L. HOM05D000847 ORTHO05D007447 6.0e-18 95.1 67 58.2
Eucgr.F03031 Eucalyptus grandis HOM05D000847 ORTHO05D007447 6.0e-18 95.1 67 61.2
COL.COLO4_30421 Corchorus olitorius HOM05D000847 ORTHO05D007447 7.9e-18 94.7 67 59.7
Duzib235G1387 Durio zibethinus HOM05D000847 ORTHO05D007447 7.9e-18 94.7 67 61.2
Nitab4.5_0001315g0230 Nicotiana tabacum HOM05D000847 ORTHO05D007447 7.9e-18 94.7 69 59.4
Glyma.13G357700 Glycine max HOM05D000847 ORTHO05D007447 1.0e-17 94.4 123 41.5
CiPaw.02G149100 Carya illinoinensis HOM05D000847 ORTHO05D007447 1.3e-17 94.0 67 59.7
Nitab4.5_0008314g0060 Nicotiana tabacum HOM05D000847 ORTHO05D007447 1.3e-17 94.0 69 59.4
BraA08t32270Z Brassica rapa HOM05D000847 ORTHO05D007447 1.8e-17 93.6 67 59.7
Prupe.3G067900 Prunus persica HOM05D000847 ORTHO05D007447 1.8e-17 93.6 93 49.5
PGSC0003DMG400002622 Solanum tuberosum HOM05D000847 ORTHO05D007447 1.8e-17 93.6 90 48.9
RcHm_v2.0_Chr2g0138751 Rosa chinensis HOM05D000847 ORTHO05D007447 2.3e-17 93.2 67 58.2
AT3G16110 Arabidopsis thaliana HOM05D000847 ORTHO05D007447 3.0e-17 92.8 67 58.2
CANSAT56G4327 Cannabis sativa HOM05D000847 ORTHO05D007447 3.0e-17 92.8 67 59.7
Carub.0003s1584 Capsella rubella HOM05D000847 ORTHO05D007447 3.0e-17 92.8 67 58.2
Glyma.15G015700 Glycine max HOM05D000847 ORTHO05D007447 3.0e-17 92.8 67 59.7
Lalb_Chr14g0373311 Lupinus albus HOM05D000847 ORTHO05D007447 3.9e-17 92.4 67 59.7
HPP92_021741 Vanilla planifolia HOM05D000847 ORTHO05D007447 3.9e-17 92.4 67 59.7
Atru.chr1.3326 Acer truncatum HOM05D000847 ORTHO05D007447 5.1e-17 92.0 69 60.9
A08p02250 Brassica napus HOM05D000847 ORTHO05D007447 5.1e-17 92.0 67 58.2
DCAR_007566 Daucus carota HOM05D000847 ORTHO05D007447 5.1e-17 92.0 84 50.0
MBI01_g39981_MAGBIO Magnolia biondii HOM05D000847 ORTHO05D007447 5.1e-17 92.0 83 53.0
Thecc.06G091400 Theobroma cacao HOM05D000847 ORTHO05D007447 5.1e-17 92.0 67 58.2
Aa31LG8G3260 Aethionema arabicum HOM05D000847 ORTHO05D007447 6.7e-17 91.7 67 56.7
arahy.Tifrunner.gnm1.ann1.DFND2S Arachis hypogaea HOM05D000847 ORTHO05D007447 6.7e-17 91.7 68 57.4
arahy.Tifrunner.gnm1.ann1.HTSJ7Y Arachis hypogaea HOM05D000847 ORTHO05D007447 6.7e-17 91.7 68 57.4
BolC3t21376H Brassica oleracea HOM05D000847 ORTHO05D007447 6.7e-17 91.7 67 58.2
MD17G1191800 Malus domestica HOM05D000847 ORTHO05D007447 6.7e-17 91.7 67 58.2
Sp1g38800 Schrenkiella parvula HOM05D000847 ORTHO05D007447 6.7e-17 91.7 67 56.7
Solyc03g120720.3 Solanum lycopersicum HOM05D000847 ORTHO05D007447 6.7e-17 91.7 130 39.2
FAN02G1503 Fragaria x ananassa HOM05D000847 ORTHO05D007447 8.7e-17 91.3 67 56.7
PGR102G2237 Punica granatum HOM05D000847 ORTHO05D007447 8.7e-17 91.3 67 56.7
Sopen03g039540 Solanum pennellii HOM05D000847 ORTHO05D007447 1.1e-16 90.9 130 39.2
FvH4_6g31670 Fragaria vesca HOM05D000847 ORTHO05D007447 1.5e-16 90.5 86 47.7
FAN05G5441 Fragaria x ananassa HOM05D000847 ORTHO05D007447 1.5e-16 90.5 67 56.7
FAN14G1800 Fragaria x ananassa HOM05D000847 ORTHO05D007447 1.5e-16 90.5 86 47.7
Lsat_1_v5_gn_4_101980 Lactuca sativa HOM05D000847 ORTHO05D007447 1.5e-16 90.5 110 43.6
MD09G1209900 Malus domestica HOM05D000847 ORTHO05D007447 1.5e-16 90.5 67 56.7
Actinidia01813 Actinidia chinensis HOM05D000847 ORTHO05D007447 1.9e-16 90.1 71 54.9
Aqoxy7G01631 Aquilegia oxysepala HOM05D000847 ORTHO05D007447 1.9e-16 90.1 67 58.2
BcaB04g17162 Brassica carinata HOM05D000847 ORTHO05D007447 1.9e-16 90.1 67 59.7
BcaC01g01315 Brassica carinata HOM05D000847 ORTHO05D007447 1.9e-16 90.1 67 56.7
BcaC01g01316 Brassica carinata HOM05D000847 ORTHO05D007447 1.9e-16 90.1 67 56.7
C03p90530 Brassica napus HOM05D000847 ORTHO05D007447 1.9e-16 90.1 67 56.7
Aa31LG10G2650 Aethionema arabicum HOM05D000847 ORTHO05D007447 2.5e-16 89.7 64 57.8
Lj3g0009444 Lotus japonicus HOM05D000847 ORTHO05D007447 2.5e-16 89.7 71 53.5
SGA_v2.0_scaffold37G14841 Striga asiatica HOM05D000847 ORTHO05D007447 2.5e-16 89.7 67 59.7
AL3G28770 Arabidopsis lyrata HOM05D000847 ORTHO05D007447 3.3e-16 89.4 124 39.5
CAN.G438.16 Capsicum annuum HOM05D000847 ORTHO05D007447 3.3e-16 89.4 83 50.6
THA.LOC104817984 Tarenaya hassleriana HOM05D000847 ORTHO05D007447 3.3e-16 89.4 67 55.2
Oeu033504.1 Olea europaea HOM05D000847 ORTHO05D007447 4.3e-16 89.0 67 58.2
Sp3g14460 Schrenkiella parvula HOM05D000847 ORTHO05D007447 4.3e-16 89.0 67 55.2
TWI18G0861 Tripterygium wilfordii HOM05D000847 ORTHO05D007447 4.3e-16 89.0 101 40.6
EL10Ac9g22021 Beta vulgaris HOM05D000847 ORTHO05D007447 5.6e-16 88.6 102 42.2
Psat5g298280 Pisum sativum HOM05D000847 ORTHO05D007447 5.6e-16 88.6 67 56.7
TPR.G37182 Trifolium pratense HOM05D000847 ORTHO05D007447 5.6e-16 88.6 67 58.2
VMungo1080G0895 Vigna mungo HOM05D000847 ORTHO05D007447 5.6e-16 88.6 67 53.7
Ah.01g021550 Amaranthus hybridus HOM05D000847 ORTHO05D007447 7.4e-16 88.2 67 55.2
Ciclev10025300m.g Citrus clementina HOM05D000847 ORTHO05D007447 9.6e-16 87.8 67 58.2
Thhalv10011373m.g Eutrema salsugineum HOM05D000847 ORTHO05D007447 9.6e-16 87.8 67 53.7
Phvul.005G168200 Phaseolus vulgaris HOM05D000847 ORTHO05D007447 9.6e-16 87.8 67 53.7
AT1G52260 Arabidopsis thaliana HOM05D000847 ORTHO05D007447 1.3e-15 87.4 67 56.7
Carub.0001s4123 Capsella rubella HOM05D000847 ORTHO05D007447 1.3e-15 87.4 67 53.7
AL1G60430 Arabidopsis lyrata HOM05D000847 ORTHO05D007447 1.6e-15 87.0 67 53.7
FAN09G1049 Fragaria x ananassa HOM05D000847 ORTHO05D007447 1.6e-15 87.0 67 53.7
Atru.chr1.4147 Acer truncatum HOM05D000847 ORTHO05D007447 2.1e-15 86.7 67 61.2
Ca_01125_v3 Cicer arietinum L. HOM05D000847 ORTHO05D007447 2.1e-15 86.7 67 56.7
Medtr2g101880 Medicago truncatula HOM05D000847 ORTHO05D007447 2.8e-15 86.3 67 58.2
PSO210G5089 Papaver somniferum HOM05D000847 ORTHO05D007447 3.7e-15 85.9 69 58.0
unitig_32.g11597 Utricularia gibba HOM05D000847 ORTHO05D007447 3.7e-15 85.9 71 53.5
Sc15g0001300 Simmondsia chinensis HOM05D000847 ORTHO05D007447 4.8e-15 85.5 67 55.2
CARHR091270 Cardamine hirsuta HOM05D000847 ORTHO05D007447 6.2e-15 85.1 67 52.2
PSO210G1204 Papaver somniferum HOM05D000847 ORTHO05D007447 6.2e-15 85.1 69 58.0
C06p07480 Brassica napus HOM05D000847 ORTHO05D007447 1.1e-14 84.3 67 52.2
BolC6t35837H Brassica oleracea HOM05D000847 ORTHO05D007447 1.1e-14 84.3 67 52.2
Hund06624 Selenicereus undatus HOM05D000847 ORTHO05D007447 1.1e-14 84.3 83 45.8
A06p01940 Brassica napus HOM05D000847 ORTHO05D007447 1.4e-14 84.0 67 50.7
BraA06t23410Z Brassica rapa HOM05D000847 ORTHO05D007447 1.4e-14 84.0 67 50.7
Os06g0163400 Oryza sativa ssp. japonica HOM05D000847 ORTHO05D007447 1.4e-14 84.0 67 55.2
SHI10973 Sapria himalayana HOM05D000847 ORTHO05D007447 1.8e-14 83.6 71 54.9
HanXRQChr16g0500911 Helianthus annuus HOM05D000847 ORTHO05D007447 2.4e-14 83.2 85 49.4
Migut.I00949 Erythranthe guttata HOM05D000847 ORTHO05D007447 3.1e-14 82.8 68 52.9
AUR62011643 Chenopodium quinoa HOM05D000847 ORTHO05D007447 4.0e-14 82.4 85 47.1
SEGI_18718 Sequoiadendron giganteum HOM05D000847 ORTHO05D007447 4.0e-14 82.4 71 52.1
Thhalv10020584m.g Eutrema salsugineum HOM05D000847 ORTHO05D007447 6.9e-14 81.6 67 49.3
Zm00001eb375710 Zea mays HOM05D000847 ORTHO05D007447 2.6e-13 79.7 67 50.7
ATR0315G157 Amborella trichopoda HOM05D000847 ORTHO05D007447 1.4e-11 73.9 71 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2448 Anthoceros agrestis HOM05D000847 ORTHO05D007447 7.1e-11 71.6 67 50.7
Pp3c6_1480 Physcomitrium patens HOM05D000847 ORTHO05D007447 9.3e-11 71.2 64 46.9
CDE06G1218 Ceratophyllum demersum HOM05D000476 ORTHO05D002733 3.5e-10 69.3 66 51.5
SMO164G0065 Selaginella moellendorffii HOM05D000847 ORTHO05D007447 2.3e-09 66.6 68 47.1
CDE06G1165 Ceratophyllum demersum HOM05D000476 ORTHO05D002733 2.5e-08 63.2 61 50.8
Mapoly0010s0047 Marchantia polymorpha HOM05D000847 ORTHO05D007447 4.3e-08 62.4 56 50.0
Pp3c16_23880 Physcomitrium patens HOM05D000847 ORTHO05D007447 4.8e-07 58.9 60 38.3
Ah.10g033680 Amaranthus hybridus HOM05D000847 ORTHO05D003278 3.1e-06 56.2 56 42.9
SHI06101 Sapria himalayana HOM05D000847 ORTHO05D003278 4.1e-06 55.8 88 34.1
Lalb_Chr24g0394621 Lupinus albus HOM05D000847 ORTHO05D003278 9.0e-06 54.7 64 40.6


User provided reference genes

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