Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.5e-222 775.8 377 100.0
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 3.2e-151 538.9 307 84.7
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 2.3e-45 187.2 191 51.8
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 7.5e-44 182.2 272 40.1
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.3e-43 181.4 240 42.5
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 2.8e-43 180.3 254 42.5
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 8.3e-43 178.7 190 49.5
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.1e-42 178.3 189 49.2
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 7.0e-42 175.6 195 49.2
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 7.0e-42 175.6 269 41.6
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 5.9e-41 172.6 195 48.2
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 6.6e-40 169.1 266 39.1
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 1.1e-39 168.3 194 47.4
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 1.9e-39 167.5 194 46.9
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 2.5e-39 167.2 186 47.3
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 2.5e-39 167.2 198 46.5
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 5.6e-39 166.0 195 47.2
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 6.1e-38 162.5 254 40.6
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.0e-37 161.8 195 46.7
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.4e-37 161.4 195 46.2
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 4.0e-37 159.8 200 45.0
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 5.2e-37 159.5 251 37.5
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 1.5e-36 157.9 199 44.2
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.5e-36 157.9 187 46.5
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 4.4e-36 156.4 202 44.1
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 5.7e-36 156.0 212 41.5
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 5.4e-34 149.4 187 44.9
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 2.0e-33 147.5 195 43.1
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 8.9e-29 132.1 187 40.6
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 2.0e-28 131.0 255 37.6
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 5.8e-28 129.4 187 38.5
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 2.2e-27 127.5 187 38.0
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 1.9e-26 124.4 187 37.4
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 1.2e-25 121.7 185 37.8
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 2.7e-25 120.6 143 49.0
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 1.0e-24 118.6 189 37.6
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 7.3e-23 112.5 158 39.2
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 8.1e-22 109.0 189 36.0
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 6.8e-21 105.9 188 35.1
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 8.9e-21 105.5 240 35.4
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 7.5e-20 102.4 187 35.3
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.3e-19 101.7 183 33.9
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.3e-19 101.7 183 33.9
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 1.9e-18 97.8 126 42.9
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 3.2e-18 97.1 235 33.2
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 3.2e-18 97.1 235 33.2
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 7.1e-18 95.9 191 34.6
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 7.8e-17 92.4 217 30.4
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 1.0e-16 92.0 232 29.3
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 1.9e-15 87.8 180 35.0
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.8e-13 81.3 63 60.3
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 5.2e-13 79.7 185 29.2
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 5.2e-13 79.7 207 29.0
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 3.4e-12 77.0 185 30.3
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 9.9e-12 75.5 67 56.7
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 1.7e-11 74.7 206 30.1
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 1.7e-11 74.7 102 37.3
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.7e-11 74.7 189 29.1
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 2.2e-11 74.3 76 56.6
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 2.2e-11 74.3 154 37.7
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 3.8e-11 73.6 73 58.9
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 3.8e-11 73.6 73 58.9
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 3.8e-11 73.6 91 50.5
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 6.4e-11 72.8 73 58.9
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 4.1e-10 70.1 188 26.6
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 5.4e-10 69.7 103 43.7
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 2.1e-09 67.8 192 26.6
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 4.6e-09 66.6 183 27.9
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 1.0e-08 65.5 206 30.6
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 1.1e-07 62.0 231 24.7
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.9e-07 61.2 179 27.4
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 2.5e-07 60.8 230 25.7
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 5.6e-07 59.7 193 29.0
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 7.3e-07 59.3 203 26.6
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 7.3e-07 59.3 191 23.6
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 7.3e-07 59.3 188 28.2
TAR636G0574 Trochodendron aralioides HOM05D003060 ORTHO05D001716 9.6e-07 58.9 133 26.3
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 1.2e-06 58.5 199 28.1
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 1.2e-06 58.5 196 26.0
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 1.6e-06 58.2 201 25.9
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 6.2e-06 56.2 158 28.5
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 6.2e-06 56.2 178 23.6
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 6.2e-06 56.2 190 25.8
Cc00_g10560 Coffea canephora HOM05D003060 ORTHO05D001716 8.1e-06 55.8 120 29.2
DCAR_031984 Daucus carota HOM05D008196 ORTHO05D010261 8.1e-06 55.8 46 47.8
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 8.1e-06 55.8 173 27.2


User provided reference genes

Program Settings