Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.8e-54 215.7 110 100.0
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.8e-51 205.7 110 95.5
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 1.9e-35 152.5 110 67.3
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 1.1e-32 143.3 107 66.4
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 1.9e-32 142.5 110 66.4
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 5.6e-32 141.0 109 61.5
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 5.6e-32 141.0 107 64.5
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 1.6e-31 139.4 110 64.5
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 8.1e-31 137.1 107 57.0
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 3.1e-30 135.2 107 60.7
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 3.1e-30 135.2 107 56.1
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 5.2e-30 134.4 111 61.3
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 2.9e-28 128.6 107 53.3
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 1.1e-27 126.7 110 51.8
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 1.9e-27 125.9 108 59.3
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 3.2e-27 125.2 108 58.3
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 3.2e-27 125.2 107 54.2
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 4.1e-27 124.8 110 58.2
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 5.4e-27 124.4 107 56.1
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 7.1e-27 124.0 108 52.8
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 9.2e-27 123.6 107 57.0
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 9.2e-27 123.6 108 55.6
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 9.2e-27 123.6 110 50.0
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 1.2e-26 123.2 107 52.3
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 7.8e-26 120.6 110 54.5
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 1.0e-25 120.2 108 56.5
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 1.3e-25 119.8 110 53.6
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 2.3e-25 119.0 108 56.5
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 3.0e-25 118.6 107 48.6
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 3.9e-25 118.2 111 53.2
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 5.1e-25 117.9 109 53.2
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 5.1e-25 117.9 107 51.4
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 6.6e-25 117.5 107 51.4
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 6.6e-25 117.5 110 48.2
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 1.1e-24 116.7 110 46.4
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 1.1e-24 116.7 113 54.9
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 1.9e-24 115.9 108 54.6
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 2.5e-24 115.5 109 46.8
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 3.3e-24 115.2 110 55.5
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 5.6e-24 114.4 109 49.5
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 5.6e-24 114.4 107 51.4
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 7.3e-24 114.0 108 50.9
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 7.3e-24 114.0 110 44.5
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 9.5e-24 113.6 109 45.0
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 1.2e-23 113.2 110 47.3
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 2.1e-23 112.5 111 45.9
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 2.8e-23 112.1 111 45.9
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 2.8e-23 112.1 111 45.9
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 2.8e-23 112.1 109 45.9
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 2.8e-23 112.1 107 54.2
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 4.7e-23 111.3 109 48.6
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 4.7e-23 111.3 104 49.0
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 6.2e-23 110.9 117 49.6
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 8.1e-23 110.5 111 45.9
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.1e-22 110.2 109 48.6
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 1.8e-22 109.4 106 45.3
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 1.8e-22 109.4 108 52.8
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 2.4e-22 109.0 107 49.5
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 4.0e-22 108.2 109 48.6
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 4.0e-22 108.2 107 47.7
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 6.8e-22 107.5 108 50.0
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 6.8e-22 107.5 109 43.1
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 8.9e-22 107.1 109 51.4
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 1.2e-21 106.7 109 48.6
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 1.2e-21 106.7 109 49.5
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 1.2e-21 106.7 107 47.7
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 1.5e-21 106.3 109 46.8
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.5e-21 106.3 109 46.8
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 1.5e-21 106.3 105 47.6
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 2.0e-21 105.9 111 48.6
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 2.6e-21 105.5 101 46.5
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 2.6e-21 105.5 108 46.3
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 4.4e-21 104.8 111 48.6
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 4.4e-21 104.8 107 51.4
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 5.8e-21 104.4 108 48.1
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 7.6e-21 104.0 108 47.2
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 9.9e-21 103.6 88 54.5
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 9.9e-21 103.6 108 45.4
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 6.4e-20 100.9 111 46.8
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 1.1e-19 100.1 109 48.6
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 1.9e-19 99.4 107 44.9
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 2.4e-19 99.0 114 41.2
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 3.2e-19 98.6 108 44.4
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 3.2e-19 98.6 108 44.4
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 2.1e-18 95.9 104 43.3
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 6.0e-18 94.4 104 42.3
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 5.1e-17 91.3 97 44.3
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 1.1e-16 90.1 66 66.7
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 6.2e-15 84.3 81 53.1
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 1.8e-14 82.8 77 46.8
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 2.0e-13 79.3 107 43.9
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 2.6e-13 79.0 71 54.9
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 2.6e-13 79.0 76 51.3
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 4.4e-13 78.2 93 48.4
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 1.7e-12 76.3 114 36.8
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 2.4e-11 72.4 81 46.9
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 1.4e-06 56.6 56 51.8
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 1.4e-06 56.6 56 51.8
AUR62038525 Chenopodium quinoa HOM05D007557 ORTHO05D000493 6.9e-06 54.3 55 47.3


User provided reference genes

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