Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 8.8e-165 583.6 297 100.0
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.3e-156 555.1 297 93.9
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 6.4e-131 471.1 297 76.8
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.4e-130 469.9 294 79.3
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.2e-130 468.8 298 77.5
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.2e-130 468.8 298 77.5
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 3.5e-129 465.3 302 78.1
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 4.6e-129 464.9 297 78.5
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.7e-128 463.0 297 78.1
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 6.6e-128 461.1 297 75.8
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 8.6e-128 460.7 295 77.6
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 8.6e-128 460.7 297 76.4
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.1e-127 460.3 298 77.9
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 3.3e-127 458.8 297 76.4
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 3.3e-127 458.8 297 76.8
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 3.3e-127 458.8 297 77.4
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 5.6e-127 458.0 297 77.4
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 9.5e-127 457.2 297 76.1
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 1.6e-126 456.4 296 76.4
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 1.6e-126 456.4 297 75.8
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 2.1e-126 456.1 298 76.5
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 2.1e-126 456.1 297 76.8
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 3.6e-126 455.3 297 76.8
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 8.0e-126 454.1 305 74.4
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 1.1e-125 453.8 305 74.4
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 2.3e-125 452.6 297 76.4
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 2.3e-125 452.6 297 77.4
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 3.1e-125 452.2 297 76.1
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 6.8e-125 451.1 297 76.1
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 8.9e-125 450.7 297 75.1
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 8.9e-125 450.7 297 76.8
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.2e-124 450.3 297 76.8
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.2e-124 450.3 297 75.8
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.5e-124 449.9 297 75.4
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.0e-124 449.5 297 75.4
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 2.0e-124 449.5 341 67.7
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 2.0e-124 449.5 297 75.1
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 2.6e-124 449.1 297 73.1
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 3.4e-124 448.7 297 75.4
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 4.4e-124 448.4 293 76.5
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 4.4e-124 448.4 297 76.4
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 5.8e-124 448.0 297 75.8
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 7.5e-124 447.6 295 74.9
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 7.5e-124 447.6 295 74.9
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 1.3e-123 446.8 297 75.8
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 1.7e-123 446.4 297 72.1
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 2.2e-123 446.0 298 73.8
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 3.7e-123 445.3 295 73.9
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 6.4e-123 444.5 297 74.1
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 1.9e-122 443.0 297 73.4
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 4.1e-122 441.8 297 74.4
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 7.0e-122 441.0 299 75.6
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 71.7
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 1.2e-121 440.3 294 73.8
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.6e-121 439.9 298 74.2
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.6e-121 439.9 299 72.9
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.6e-121 439.9 294 73.5
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.6e-121 439.9 294 73.5
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 2.1e-121 439.5 297 74.1
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 2.1e-121 439.5 297 73.1
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 2.1e-121 439.5 296 72.6
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 2.7e-121 439.1 297 73.4
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 7.8e-121 437.6 297 71.7
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 7.8e-121 437.6 297 73.7
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.0e-120 437.2 315 69.2
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.3e-120 436.8 315 68.6
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 1.3e-120 436.8 298 74.5
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.7e-120 436.4 297 72.7
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 2.3e-120 436.0 295 74.9
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 3.0e-120 435.6 297 71.7
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 5.1e-120 434.9 294 72.8
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.1e-119 433.7 297 73.1
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 1.9e-119 433.0 294 71.8
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 3.3e-119 432.2 282 75.9
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 71.4
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.8e-118 429.1 297 72.1
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 3.6e-118 428.7 294 72.4
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.7e-118 428.3 315 67.6
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 6.2e-118 427.9 292 71.6
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 8.1e-118 427.6 297 70.0
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 2.3e-117 426.0 298 71.5
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 3.1e-117 425.6 294 72.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 6.8e-117 424.5 297 71.0
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.2e-116 423.7 298 70.8
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 9.9e-116 420.6 282 73.4
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 9.9e-116 420.6 298 70.5
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 1.7e-115 419.9 262 77.9
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 2.2e-115 419.5 297 71.4
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 1.4e-114 416.8 295 69.5
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 1.9e-114 416.4 285 71.6
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.9e-114 416.4 295 69.5
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.9e-114 416.4 295 70.5
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 2.4e-114 416.0 295 69.5
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 2.4e-114 416.0 295 71.5
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 2.1e-113 412.9 281 73.0
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 3.5e-113 412.1 274 74.1
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 3.5e-113 412.1 277 75.5
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 4.6e-113 411.8 295 69.2
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 6.0e-113 411.4 297 67.3
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 6.0e-113 411.4 295 68.8
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 1.7e-112 409.8 297 67.3
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 3.6e-110 402.1 295 67.5
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 3.6e-110 402.1 295 67.5
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 4.0e-109 398.7 295 66.8
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 2.6e-108 396.0 295 67.8
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 5.8e-108 394.8 295 66.4
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 4.9e-107 391.7 275 78.2
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.1e-106 390.6 250 76.4
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 1.9e-106 389.8 297 67.0
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.3e-103 379.0 320 62.5
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 5.3e-101 371.7 297 66.3
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 5.1e-96 355.1 219 78.5
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.1e-93 347.4 294 57.5
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 1.1e-93 347.4 216 76.9
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 2.0e-92 343.2 223 76.7
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 5.8e-92 341.7 294 57.8
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 5.4e-90 335.1 297 58.9
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 9.3e-90 334.3 223 75.8
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 1.8e-88 330.1 223 74.0
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 7.4e-87 324.7 294 55.1
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 2.8e-86 322.8 279 59.1
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 4.8e-86 322.0 294 55.1
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.4e-85 320.5 290 57.2
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 7.6e-84 314.7 223 69.1
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 1.3e-83 313.9 262 57.3
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 1.2e-81 307.4 295 53.6
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.8e-69 266.9 256 53.1
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.9e-67 259.6 231 57.6
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 5.0e-67 258.8 177 75.1
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-64 250.8 223 57.0
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 3.4e-60 236.1 150 78.7
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.3e-56 223.4 202 58.9
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.5e-55 220.7 165 64.2
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 8.2e-54 214.9 149 66.4
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.1e-53 214.5 143 68.5
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.1e-53 213.0 135 77.0
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 7.7e-44 181.8 266 38.3
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.2e-41 174.5 302 37.4
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 1.5e-39 167.5 182 52.2
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 7.0e-37 158.7 138 60.1
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 4.2e-34 149.4 106 71.7
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 1.4e-32 144.4 101 66.3
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 6.8e-32 142.1 107 69.2
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-27 127.9 132 56.8
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 5.2e-24 115.9 262 28.6
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 2.8e-22 110.2 65 84.6
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.6e-20 104.4 81 64.2
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 5.9e-20 102.4 113 52.2
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 2.9e-19 100.1 126 46.0
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 1.9e-13 80.9 103 45.6
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 4.6e-12 76.3 103 43.7
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 1.1e-10 71.6 93 47.3
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 8.0e-09 65.5 52 65.4
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.8e-08 64.3 71 47.9
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 2.0e-07 60.8 37 73.0
VMungo0251G3417 Vigna mungo HOM05D004415 ORTHO05D005198 3.4e-07 60.1 55 54.5


User provided reference genes

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