Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.4e-130 469.5 232 100.0
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 4.1e-117 424.9 232 90.1
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 2.0e-79 299.7 210 69.0
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 1.7e-78 296.6 230 64.3
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 8.3e-78 294.3 198 70.7
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 9.2e-77 290.8 231 61.9
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 6.0e-76 288.1 202 66.8
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 4.3e-74 282.0 216 63.4
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 9.5e-74 280.8 204 66.2
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 2.8e-73 279.3 204 66.2
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 3.6e-73 278.9 219 65.8
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 3.6e-73 278.9 204 65.7
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 3.6e-73 278.9 213 64.8
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 1.1e-72 277.3 209 61.2
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 1.1e-72 277.3 200 67.5
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 1.8e-72 276.6 232 60.8
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 2.3e-72 276.2 225 63.1
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 2.3e-72 276.2 194 67.5
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 3.1e-72 275.8 210 65.2
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 3.1e-72 275.8 192 67.2
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 5.2e-72 275.0 214 64.5
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 8.9e-72 274.2 203 64.0
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 1.2e-71 273.9 215 63.3
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 1.2e-71 273.9 172 73.8
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 1.2e-71 273.9 215 65.6
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.5e-71 273.5 194 66.5
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 1.5e-71 273.5 194 66.5
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 1.5e-71 273.5 197 67.0
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 1.5e-71 273.5 201 66.2
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 2.6e-71 272.7 207 62.8
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 3.4e-71 272.3 191 68.6
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 5.8e-71 271.6 215 61.9
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 5.8e-71 271.6 200 64.5
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 7.5e-71 271.2 211 63.5
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 9.9e-71 270.8 232 59.9
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 1.3e-70 270.4 220 58.2
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 1.7e-70 270.0 213 60.6
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 1.7e-70 270.0 171 74.3
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 2.2e-70 269.6 226 59.3
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 2.2e-70 269.6 201 65.2
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 3.7e-70 268.9 216 60.2
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 3.7e-70 268.9 194 66.5
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 3.7e-70 268.9 211 63.5
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 4.9e-70 268.5 191 67.5
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 8.3e-70 267.7 182 71.4
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 1.1e-69 267.3 200 63.0
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 1.1e-69 267.3 225 59.6
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 1.1e-69 267.3 207 62.8
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 1.9e-69 266.5 171 73.1
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 4.1e-69 265.4 204 60.8
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 5.4e-69 265.0 218 60.6
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 5.4e-69 265.0 171 71.9
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 7.1e-69 264.6 202 60.9
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 1.6e-68 263.5 201 63.2
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 2.1e-68 263.1 211 62.1
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 3.5e-68 262.3 203 64.5
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 4.6e-68 261.9 200 64.5
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 1.3e-67 260.4 208 58.7
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 1.7e-67 260.0 204 60.8
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 2.3e-67 259.6 183 69.9
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 3.9e-67 258.8 263 54.8
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 2.5e-66 256.1 216 58.8
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 1.2e-65 253.8 222 57.7
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 2.1e-65 253.1 217 59.0
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 1.8e-64 250.0 207 58.9
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 2.4e-64 249.6 154 72.7
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 2.4e-64 249.6 193 62.2
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 3.1e-64 249.2 207 58.9
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 1.5e-63 246.9 206 62.1
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 2.6e-63 246.1 278 50.4
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 2.6e-63 246.1 172 65.1
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 3.4e-63 245.7 214 57.5
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 4.4e-63 245.4 171 67.3
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 7.6e-63 244.6 210 56.2
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 7.6e-63 244.6 215 56.3
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 7.6e-63 244.6 210 56.2
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 7.6e-63 244.6 210 56.2
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 9.9e-63 244.2 218 56.4
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 1.3e-62 243.8 214 56.5
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 6.4e-62 241.5 186 64.5
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 6.4e-62 241.5 168 67.3
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 2.1e-60 236.5 152 72.4
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 2.1e-60 236.5 181 64.1
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 1.7e-59 233.4 195 56.9
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 2.3e-59 233.0 153 69.9
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 3.9e-59 232.3 170 60.6
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 5.8e-55 218.4 152 67.8
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 4.9e-54 215.3 183 62.8
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 1.4e-53 213.8 171 60.2
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 5.3e-48 195.3 184 53.3
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 2.6e-47 193.0 171 59.1
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 1.6e-44 183.7 240 47.1
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 6.0e-44 181.8 132 68.9
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 7.4e-42 174.9 138 60.9
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 9.6e-42 174.5 169 57.4
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 2.6e-39 166.4 148 56.1
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 2.6e-39 166.4 202 46.5
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 4.5e-39 165.6 206 44.2
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 2.0e-31 140.2 178 44.4
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 7.6e-31 138.3 83 72.3
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 3.0e-27 126.3 139 41.0
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 5.5e-21 105.5 158 41.1
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 7.9e-20 101.7 174 36.2
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 6.1e-12 75.5 39 84.6


User provided reference genes

Program Settings