Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0147 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 1.3e-109 399.8 208 100.0
CDE05G0874 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 2.5e-25 119.8 228 35.1
COL.COLO4_27276 Corchorus olitorius HOM05D005154 ORTHO05D006270 2.5e-25 119.8 145 50.3
Cpa.g.sc55.88 Carica papaya HOM05D005154 ORTHO05D006270 1.6e-24 117.1 103 62.1
Duzib147G1408 Durio zibethinus HOM05D005154 ORTHO05D006270 2.1e-24 116.7 109 58.7
Migut.H02344 Erythranthe guttata HOM05D005154 ORTHO05D006270 2.8e-24 116.3 144 50.0
Actinidia20002 Actinidia chinensis HOM05D005154 ORTHO05D006270 4.7e-24 115.5 98 62.2
MSTRG.2575 Avicennia marina HOM05D005154 ORTHO05D006270 4.7e-24 115.5 102 62.7
Gorai.003G040700 Gossypium raimondii HOM05D005154 ORTHO05D006270 6.2e-24 115.2 119 54.6
Lalb_Chr07g0185271 Lupinus albus HOM05D005154 ORTHO05D006270 6.2e-24 115.2 107 57.0
SGA_v2.0_scaffold111G31501 Striga asiatica HOM05D005154 ORTHO05D006270 6.2e-24 115.2 100 62.0
MBI02_g02178_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 8.1e-24 114.8 221 36.7
Nn1g06223 Nelumbo nucifera HOM05D005154 ORTHO05D006270 1.1e-23 114.4 103 60.2
Thecc.01G097800 Theobroma cacao HOM05D005154 ORTHO05D006270 1.1e-23 114.4 144 49.3
TAR633G1456 Trochodendron aralioides HOM05D005154 ORTHO05D006270 1.1e-23 114.4 103 59.2
Gohir.A02G128100 Gossypium hirsutum HOM05D005154 ORTHO05D006270 1.4e-23 114.0 119 53.8
Gohir.D03G039500 Gossypium hirsutum HOM05D005154 ORTHO05D006270 1.4e-23 114.0 119 53.8
Sabra07G0078700 Salix brachista HOM05D005154 ORTHO05D006270 1.4e-23 114.0 103 59.2
Duzib187G0267 Durio zibethinus HOM05D005154 ORTHO05D006270 1.8e-23 113.6 103 59.2
VMungo0251G0355 Vigna mungo HOM05D005154 ORTHO05D006270 1.8e-23 113.6 102 61.8
Dinv13215 Davidia involucrata HOM05D005154 ORTHO05D006270 2.4e-23 113.2 103 60.2
Cfa002623 Carpinus fangiana HOM05D005154 ORTHO05D006270 3.1e-23 112.8 103 58.3
C03p60830 Brassica napus HOM05D005154 ORTHO05D006270 4.0e-23 112.5 106 55.7
Ca_17754_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 4.0e-23 112.5 103 61.2
RcHm_v2.0_Chr2g0112751 Rosa chinensis HOM05D005154 ORTHO05D006270 4.0e-23 112.5 106 57.5
Carub.0008s2612 Capsella rubella HOM05D005154 ORTHO05D006270 5.3e-23 112.1 126 52.4
FvH4_1g20490 Fragaria vesca HOM05D005154 ORTHO05D006270 5.3e-23 112.1 102 59.8
Eucgr.I00513 Eucalyptus grandis HOM05D005154 ORTHO05D006270 6.9e-23 111.7 118 53.4
TWI77G0548 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 6.9e-23 111.7 115 54.8
AUR62003820 Chenopodium quinoa HOM05D005154 ORTHO05D006270 9.0e-23 111.3 111 54.1
Haze_24872 Corylus avellana HOM05D005154 ORTHO05D006270 9.0e-23 111.3 103 57.3
Haze_24881 Corylus avellana HOM05D005154 ORTHO05D006270 9.0e-23 111.3 103 57.3
Glyma.05G176600 Glycine max HOM05D005154 ORTHO05D006270 9.0e-23 111.3 102 60.8
QL06p048470 Quercus lobata HOM05D005154 ORTHO05D006270 9.0e-23 111.3 103 60.2
Potri.007G095600 Populus trichocarpa HOM05D005154 ORTHO05D006270 1.2e-22 110.9 103 58.3
FAN23G2516 Fragaria x ananassa HOM05D005154 ORTHO05D006270 1.5e-22 110.5 102 59.8
FAN28G0994 Fragaria x ananassa HOM05D005154 ORTHO05D006270 1.5e-22 110.5 102 59.8
Cc07_g14830 Coffea canephora HOM05D005154 ORTHO05D006270 2.6e-22 109.8 103 60.2
Aa31LG1G16710 Aethionema arabicum HOM05D005154 ORTHO05D006270 3.4e-22 109.4 108 54.6
MSTRG.3768 Avicennia marina HOM05D005154 ORTHO05D006270 3.4e-22 109.4 103 56.3
Manes.12G131800 Manihot esculenta HOM05D005154 ORTHO05D006270 3.4e-22 109.4 102 58.8
Medtr8g089995 Medicago truncatula HOM05D005154 ORTHO05D006270 3.4e-22 109.4 149 45.0
THA.LOC104798878 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 3.4e-22 109.4 102 55.9
TWI53G2081 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 3.4e-22 109.4 103 58.3
GSVIVG01006633001 Vitis vinifera HOM05D005154 ORTHO05D006270 3.4e-22 109.4 136 47.1
Atru.chr3.1372 Acer truncatum HOM05D005154 ORTHO05D006270 4.4e-22 109.0 103 57.3
Ciclev10026087m.g Citrus clementina HOM05D005154 ORTHO05D006270 4.4e-22 109.0 103 57.3
ECA238G2162 Erigeron canadensis HOM05D005154 ORTHO05D001925 4.4e-22 109.0 110 57.3
BcaB07g34227 Brassica carinata HOM05D005154 ORTHO05D006270 5.8e-22 108.6 100 58.0
BcaC01g02761 Brassica carinata HOM05D005154 ORTHO05D006270 5.8e-22 108.6 106 53.8
CARHR279200 Cardamine hirsuta HOM05D005154 ORTHO05D006270 5.8e-22 108.6 114 54.4
BolC3t18339H Brassica oleracea HOM05D002046 ORTHO05D002180 7.6e-22 108.2 106 53.8
BraA02t09304Z Brassica rapa HOM05D005154 ORTHO05D006270 7.6e-22 108.2 100 57.0
Hma1.2p1_0019F.1_g013610 Hydrangea macrophylla HOM05D005154 ORTHO05D006270 7.6e-22 108.2 102 56.9
Lj4g0010322 Lotus japonicus HOM05D005154 ORTHO05D006270 7.6e-22 108.2 103 58.3
MD00G1037300 Malus domestica HOM05D005154 ORTHO05D006270 7.6e-22 108.2 103 59.2
ATR1133G017 Amborella trichopoda HOM05D005154 ORTHO05D006270 9.9e-22 107.8 103 58.3
AL8G42810 Arabidopsis lyrata HOM05D005154 ORTHO05D006270 9.9e-22 107.8 108 53.7
BolC2t12462H Brassica oleracea HOM05D005154 ORTHO05D006270 9.9e-22 107.8 100 58.0
AUR62001985 Chenopodium quinoa HOM05D005154 ORTHO05D006270 9.9e-22 107.8 103 56.3
Rhsim08G0012700 Rhododendron simsii HOM05D005154 ORTHO05D006270 1.3e-21 107.5 103 56.3
Sabra05G0060000 Salix brachista HOM05D005154 ORTHO05D006270 1.3e-21 107.5 143 46.9
Sed0002157 Sechium edule HOM05D005154 ORTHO05D006270 1.3e-21 107.5 103 56.3
CSS0008069 Camellia sinensis var. sinensis HOM05D005154 ORTHO05D006270 1.7e-21 107.1 143 47.6
Thhalv10004756m.g Eutrema salsugineum HOM05D005154 ORTHO05D006270 1.7e-21 107.1 106 55.7
PSO210G3532 Papaver somniferum HOM05D005154 ORTHO05D006270 1.7e-21 107.1 103 57.3
Migut.L00147 Erythranthe guttata HOM05D005154 ORTHO05D006270 2.2e-21 106.7 102 54.9
A02p43800 Brassica napus HOM05D005154 ORTHO05D006270 2.9e-21 106.3 100 56.0
MELO3C007745.2 Cucumis melo HOM05D005154 ORTHO05D006270 2.9e-21 106.3 101 57.4
Nn5g28615 Nelumbo nucifera HOM05D005154 ORTHO05D006270 2.9e-21 106.3 102 56.9
PGR004G1180 Punica granatum HOM05D005154 ORTHO05D006270 2.9e-21 106.3 103 55.3
SGA_v2.0_scaffold335G49113 Striga asiatica HOM05D005154 ORTHO05D006270 2.9e-21 106.3 110 55.5
TAR362G0353 Trochodendron aralioides HOM05D005154 ORTHO05D006270 2.9e-21 106.3 103 58.3
EL10Ac6g15137 Beta vulgaris HOM05D005154 ORTHO05D006270 3.8e-21 105.9 103 56.3
A06p32100 Brassica napus HOM05D005154 ORTHO05D006270 3.8e-21 105.9 106 51.9
BraA06t26139Z Brassica rapa HOM05D005154 ORTHO05D006270 3.8e-21 105.9 106 51.9
DCAR_014210 Daucus carota HOM05D005154 ORTHO05D006270 3.8e-21 105.9 146 46.6
Lj4A897G79 Lonicera japonica HOM05D005154 ORTHO05D006270 3.8e-21 105.9 108 57.4
Potri.005G073500 Populus trichocarpa HOM05D005154 ORTHO05D006270 3.8e-21 105.9 97 58.8
CiPaw.03G144000 Carya illinoinensis HOM05D005154 ORTHO05D006270 4.9e-21 105.5 103 58.3
Phvul.002G257700 Phaseolus vulgaris HOM05D005154 ORTHO05D006270 4.9e-21 105.5 102 56.9
vmacro18586 Vaccinium macrocarpon HOM05D005154 ORTHO05D006270 4.9e-21 105.5 103 55.3
MELO3C017601.2 Cucumis melo HOM05D005154 ORTHO05D006270 6.4e-21 105.1 102 56.9
FAN19G2087 Fragaria x ananassa HOM05D005154 ORTHO05D006270 6.4e-21 105.1 109 56.0
Sed0021389 Sechium edule HOM05D005154 ORTHO05D006270 6.4e-21 105.1 96 59.4
TPR.G6195 Trifolium pratense HOM05D005154 ORTHO05D006270 8.4e-21 104.8 106 55.7
Nitab4.5_0004570g0010 Nicotiana tabacum HOM05D005154 ORTHO05D006270 1.1e-20 104.4 103 56.3
PSO447G0271 Papaver somniferum HOM05D005154 ORTHO05D006270 1.1e-20 104.4 103 56.3
PGSC0003DMG400016159 Solanum tuberosum HOM05D005154 ORTHO05D006270 1.1e-20 104.4 149 43.0
ClCG07G017400 Citrullus lanatus HOM05D005154 ORTHO05D006270 1.4e-20 104.0 103 56.3
Lsat_1_v5_gn_2_66460 Lactuca sativa HOM05D005154 ORTHO05D006270 1.4e-20 104.0 98 57.1
SalBow3G3886 Salvia bowleyana HOM05D005154 ORTHO05D006270 1.4e-20 104.0 98 56.1
SalBow3G4482 Salvia bowleyana HOM05D005154 ORTHO05D006270 1.4e-20 104.0 98 56.1
Aqoxy6G00745 Aquilegia oxysepala HOM05D005154 ORTHO05D006270 2.4e-20 103.2 105 53.3
CAN.G905.36 Capsicum annuum HOM05D005154 ORTHO05D006270 2.4e-20 103.2 103 55.3
CsaV3_6G045320 Cucumis sativus L. HOM05D005154 ORTHO05D006270 2.4e-20 103.2 101 55.4
Sp2g28350 Schrenkiella parvula HOM05D005154 ORTHO05D006270 2.4e-20 103.2 114 52.6
HanXRQChr14g0445521 Helianthus annuus HOM05D005154 ORTHO05D006270 3.2e-20 102.8 102 54.9
Hund13599 Selenicereus undatus HOM05D005154 ORTHO05D006270 4.2e-20 102.4 103 54.4
Peaxi162Scf00381g00914 Petunia axillaris HOM05D005154 ORTHO05D006270 5.4e-20 102.1 102 55.9
MBI02_g27971_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 1.2e-19 100.9 143 45.5
Solyc11g009070.2 Solanum lycopersicum HOM05D005154 ORTHO05D006270 1.2e-19 100.9 103 53.4
Sopen11g004840 Solanum pennellii HOM05D005154 ORTHO05D006270 1.2e-19 100.9 103 53.4
SalBow5G0552 Salvia bowleyana HOM05D005154 ORTHO05D006270 2.7e-19 99.8 102 55.9
SEGI_40329 Sequoiadendron giganteum HOM05D005154 ORTHO05D006270 3.5e-19 99.4 105 46.7
HPP92_016780 Vanilla planifolia HOM05D005154 ORTHO05D006270 7.8e-19 98.2 117 50.4
Actinidia28853 Actinidia chinensis HOM05D005154 ORTHO05D006270 1.7e-18 97.1 98 55.1
Psat7g056800 Pisum sativum HOM05D005154 ORTHO05D006270 1.7e-18 97.1 106 49.1
Sc03g0000070 Simmondsia chinensis HOM05D005154 ORTHO05D006270 5.1e-18 95.5 102 52.0
arahy.Tifrunner.gnm1.ann1.LGH16T Arachis hypogaea HOM05D005154 ORTHO05D006270 1.5e-17 94.0 108 50.0
C02p63960 Brassica napus HOM05D005154 ORTHO05D006270 1.5e-17 94.0 117 48.7
THA.LOC104807680 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 1.9e-17 93.6 106 48.1
Os08g0484800 Oryza sativa ssp. japonica HOM05D005154 ORTHO05D006270 2.5e-17 93.2 116 45.7
PGR102G1872 Punica granatum HOM05D005154 ORTHO05D006270 5.6e-17 92.0 102 52.0
AT5G65250 Arabidopsis thaliana HOM05D005154 ORTHO05D006270 7.3e-17 91.7 106 50.0
unitig_899.g14551 Utricularia gibba HOM05D005154 ORTHO05D006270 7.3e-17 91.7 105 48.6
arahy.Tifrunner.gnm1.ann1.0B7H6P Arachis hypogaea HOM05D005154 ORTHO05D006270 2.1e-16 90.1 103 49.5
unitig_748.g8652 Utricularia gibba HOM05D005154 ORTHO05D006270 2.8e-16 89.7 94 52.1
Glyma.08G134000 Glycine max HOM05D005154 ORTHO05D006270 3.6e-16 89.4 79 60.8
Prupe.6G191100 Prunus persica HOM05D005154 ORTHO05D006270 8.1e-16 88.2 79 59.5
BcaNung07054 Brassica carinata HOM05D005154 ORTHO05D006270 1.1e-15 87.8 79 57.0
CsaV3_4G004630 Cucumis sativus L. HOM05D005154 ORTHO05D006270 1.1e-15 87.8 90 54.4
Ca_16517_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 3.4e-14 82.8 102 47.1
Oeu032406.1 Olea europaea HOM05D005154 ORTHO05D006270 4.5e-14 82.4 79 54.4
Sed0027637 Sechium edule HOM05D005154 ORTHO05D006270 1.7e-13 80.5 102 45.1
Medtr3g086990 Medicago truncatula HOM05D005154 ORTHO05D006270 4.9e-13 79.0 102 47.1
Psat5g090640 Pisum sativum HOM05D005154 ORTHO05D006270 1.4e-12 77.4 108 42.6
CsaV3_UNG158170 Cucumis sativus L. HOM05D001364 ORTHO05D006270 4.2e-12 75.9 131 41.2
Oeu001799.2 Olea europaea HOM05D005154 ORTHO05D006270 1.2e-11 74.3 161 34.2
MD01G1033600 Malus domestica HOM05D005154 ORTHO05D006270 3.5e-11 72.8 82 51.2
Mapoly0112s0020 Marchantia polymorpha HOM05D005154 ORTHO05D006270 1.0e-10 71.2 150 33.3
CBR_g50776 Chara braunii HOM05D002289 ORTHO05D004369 3.0e-10 69.7 89 39.3
CiPaw.11G071200 Carya illinoinensis HOM05D005154 ORTHO05D006270 8.7e-10 68.2 61 60.7
Pp3c10_24690 Physcomitrium patens HOM05D005154 ORTHO05D006270 8.7e-10 68.2 89 38.2
SMO171G0129 Selaginella moellendorffii HOM05D005154 ORTHO05D006270 1.9e-09 67.0 116 34.5
CsaV3_UNG129000 Cucumis sativus L. HOM05D005154 ORTHO05D006270 3.3e-09 66.2 73 52.1
AagrBONN_evm.TU.Sc2ySwM_344.1569 Anthoceros agrestis HOM05D005154 ORTHO05D006270 4.8e-08 62.4 102 31.4
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 6.2e-08 62.0 87 48.3
ClCG01G018660 Citrullus lanatus HOM05D005154 ORTHO05D006270 6.2e-08 62.0 62 56.5
Lj2C542T6 Lonicera japonica HOM05D005154 ORTHO05D006270 2.4e-07 60.1 61 55.7
CDE05G3641 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 2.6e-06 56.6 165 26.7
CiPaw.02G062100 Carya illinoinensis HOM05D005154 ORTHO05D006270 7.6e-06 55.1 47 63.8


User provided reference genes

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