Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.9e-141 505.8 245 100.0
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.6e-132 476.1 245 92.7
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 1.3e-84 317.0 248 65.7
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 8.2e-84 314.3 255 63.5
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.6e-82 309.3 256 63.7
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.3e-81 307.0 246 63.4
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 2.2e-81 306.2 253 63.6
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 5.0e-81 305.1 244 61.9
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 3.6e-79 298.9 247 61.1
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 7.9e-79 297.7 247 63.2
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 7.9e-79 297.7 250 62.4
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 2.3e-78 296.2 245 60.8
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 5.2e-78 295.0 249 60.2
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 8.8e-78 294.3 266 58.3
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 5.7e-77 291.6 238 60.5
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 5.7e-77 291.6 238 60.5
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 9.7e-77 290.8 251 59.4
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.2e-76 289.7 293 54.6
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 2.2e-76 289.7 246 59.3
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 2.8e-76 289.3 225 63.1
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 2.8e-76 289.3 248 59.7
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 2.8e-76 289.3 248 62.5
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.7e-76 288.9 250 60.0
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 4.8e-76 288.5 245 60.0
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 4.8e-76 288.5 247 60.3
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 6.3e-76 288.1 247 62.3
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 8.2e-76 287.7 228 63.6
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 8.2e-76 287.7 249 59.4
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.4e-75 287.0 258 58.1
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.4e-75 287.0 258 58.1
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.8e-75 286.6 231 62.3
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.8e-75 286.6 251 58.2
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 3.1e-75 285.8 194 70.1
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 4.1e-75 285.4 253 58.9
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.3e-75 285.0 244 60.2
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 7.0e-75 284.6 243 60.5
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 7.0e-75 284.6 243 60.5
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 7.0e-75 284.6 260 58.8
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 7.0e-75 284.6 248 58.9
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.6e-74 283.5 186 71.5
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 2.0e-74 283.1 220 64.1
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 2.6e-74 282.7 245 58.4
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 2.6e-74 282.7 249 58.6
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 4.5e-74 282.0 243 58.8
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.0e-73 280.8 246 60.2
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 1.7e-73 280.0 195 68.2
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 2.9e-73 279.3 249 57.8
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 2.9e-73 279.3 246 58.1
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 3.8e-73 278.9 280 54.3
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 5.0e-73 278.5 244 59.8
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 8.5e-73 277.7 242 58.7
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 8.5e-73 277.7 245 58.4
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.1e-72 277.3 245 58.0
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 1.5e-72 276.9 250 57.6
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.9e-72 276.6 246 58.1
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 2.5e-72 276.2 184 70.1
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 3.2e-72 275.8 186 69.4
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 3.2e-72 275.8 245 58.4
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.2e-72 275.8 245 57.1
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 7.2e-72 274.6 168 75.0
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 7.2e-72 274.6 248 58.1
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 2.1e-71 273.1 245 56.7
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 2.7e-71 272.7 163 77.9
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 3.6e-71 272.3 195 67.7
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 3.6e-71 272.3 245 58.8
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 4.7e-71 271.9 246 58.5
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 4.7e-71 271.9 195 66.7
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 6.1e-71 271.6 192 66.7
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 6.1e-71 271.6 246 56.5
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 8.0e-71 271.2 246 56.1
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 8.0e-71 271.2 246 56.1
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 1.4e-70 270.4 245 55.1
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.4e-70 270.4 245 55.9
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.2e-69 267.3 258 54.3
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 2.6e-69 266.2 250 58.0
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 2.6e-69 266.2 250 58.0
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 2.6e-69 266.2 194 61.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 5.7e-69 265.0 227 59.9
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.3e-68 263.8 250 56.8
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 2.2e-68 263.1 160 74.4
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 2.2e-68 263.1 240 57.5
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 8.2e-68 261.2 202 62.9
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.1e-67 260.8 188 64.4
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.1e-67 260.8 188 64.4
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.4e-67 259.6 276 51.1
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.2e-66 257.3 248 52.8
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.6e-66 256.9 188 63.3
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 3.8e-65 252.3 246 54.9
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 9.4e-64 247.7 231 56.3
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 2.1e-63 246.5 195 62.1
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 2.1e-63 246.5 195 62.1
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 3.6e-63 245.7 282 47.9
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 6.1e-63 245.0 195 61.5
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 6.1e-63 245.0 195 61.5
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 8.8e-62 241.1 184 63.0
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 2.0e-61 240.0 130 85.4
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 4.8e-60 235.3 163 66.3
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 8.3e-60 234.6 171 64.3
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.8e-59 233.4 238 52.5
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 9.5e-56 221.1 227 51.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 1.6e-55 220.3 189 55.0
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 6.3e-52 208.4 224 50.4
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 8.3e-52 208.0 110 86.4
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 2.4e-51 206.5 130 73.1
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 7.0e-51 204.9 130 70.8
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.9e-48 196.8 194 54.6
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 4.0e-46 189.1 132 66.7
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.1e-43 181.0 139 61.9
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 1.9e-40 170.2 187 50.3
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 2.9e-36 156.4 147 54.4
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 8.3e-36 154.8 90 75.6
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 6.2e-31 138.7 156 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 8.1e-31 138.3 111 58.6
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 8.3e-28 128.3 91 62.6
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 8.6e-25 118.2 170 40.6
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 6.8e-22 108.6 96 58.3
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 8.9e-22 108.2 56 89.3
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.5e-16 90.9 47 83.0
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 2.1e-15 87.0 102 43.1
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 9.0e-14 81.6 56 67.9
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 2.1e-10 70.5 38 73.7
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.9e-08 63.9 57 47.4
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 3.3e-08 63.2 31 90.3


User provided reference genes

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