Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 1.8e-151 539.3 277 100.0
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 3.3e-113 412.1 226 94.2
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 9.9e-86 320.9 230 69.6
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 3.9e-82 308.9 202 72.8
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.5e-81 306.2 204 76.5
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 3.3e-81 305.8 221 68.3
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 9.6e-81 304.3 228 65.8
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 4.8e-80 302.0 201 71.1
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 4.8e-80 302.0 244 64.3
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.4e-79 300.4 227 67.4
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 1.8e-79 300.1 207 69.6
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 2.4e-79 299.7 253 62.1
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 3.1e-79 299.3 201 72.1
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 3.1e-79 299.3 189 73.5
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 5.3e-79 298.5 190 74.2
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 6.9e-79 298.1 195 72.3
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 6.9e-79 298.1 200 72.0
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 6.9e-79 298.1 202 70.3
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 9.0e-79 297.7 201 71.6
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 9.0e-79 297.7 201 71.6
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 2.0e-78 296.6 189 72.5
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 2.0e-78 296.6 189 72.5
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.6e-78 296.2 201 71.1
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 5.8e-78 295.0 246 63.4
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 5.8e-78 295.0 195 72.3
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 7.6e-78 294.7 200 72.5
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 7.6e-78 294.7 202 69.3
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 7.6e-78 294.7 245 62.0
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 7.6e-78 294.7 213 67.1
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 9.9e-78 294.3 245 63.3
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 9.9e-78 294.3 245 63.3
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 1.3e-77 293.9 248 62.1
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 2.2e-77 293.1 247 62.8
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 2.2e-77 293.1 245 61.6
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 2.2e-77 293.1 245 61.6
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 2.2e-77 293.1 194 68.6
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 4.9e-77 292.0 235 62.1
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 4.9e-77 292.0 238 61.3
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 4.9e-77 292.0 251 59.0
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 1.1e-76 290.8 231 60.6
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 1.4e-76 290.4 202 69.3
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 1.4e-76 290.4 190 71.1
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 1.9e-76 290.0 220 64.1
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 2.4e-76 289.7 237 61.2
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 2.4e-76 289.7 201 68.2
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 2.4e-76 289.7 196 72.4
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 5.5e-76 288.5 197 70.6
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 7.1e-76 288.1 236 62.3
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 7.1e-76 288.1 201 69.2
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 7.1e-76 288.1 210 67.6
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 9.3e-76 287.7 242 60.3
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 1.6e-75 287.0 197 70.1
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 1.6e-75 287.0 190 70.0
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 1.6e-75 287.0 201 70.6
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 4.6e-75 285.4 233 62.2
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 4.6e-75 285.4 249 56.6
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 4.6e-75 285.4 195 68.7
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 1.3e-74 283.9 209 67.0
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 1.3e-74 283.9 228 60.1
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 2.3e-74 283.1 222 60.8
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 2.3e-74 283.1 222 60.8
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 3.9e-74 282.3 197 73.1
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 3.9e-74 282.3 196 69.9
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 3.9e-74 282.3 200 69.5
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 6.7e-74 281.6 200 68.0
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 1.1e-73 280.8 199 66.8
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 3.3e-73 279.3 239 59.4
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 3.7e-72 275.8 196 68.4
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 6.2e-72 275.0 194 69.1
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 8.1e-72 274.6 208 64.9
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 1.4e-71 273.9 196 67.3
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 9.0e-71 271.2 236 58.9
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 1.5e-70 270.4 202 66.8
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 5.8e-70 268.5 185 68.6
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 7.6e-70 268.1 224 63.4
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 6.5e-69 265.0 229 61.1
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 6.5e-69 265.0 255 59.6
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 1.9e-68 263.5 205 63.4
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 2.5e-68 263.1 187 65.8
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 2.5e-68 263.1 187 65.8
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 9.3e-68 261.2 206 63.1
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 2.1e-67 260.0 178 68.5
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 4.6e-67 258.8 217 59.4
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 5.1e-66 255.4 188 66.5
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 5.7e-65 251.9 193 63.7
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 5.7e-65 251.9 218 60.6
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 1.6e-64 250.4 203 61.6
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 2.1e-64 250.0 208 62.0
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 2.1e-64 250.0 193 63.7
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 2.1e-64 250.0 212 62.3
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 3.7e-64 249.2 218 60.1
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 6.3e-64 248.4 196 61.7
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 8.2e-64 248.1 203 62.6
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 8.2e-64 248.1 203 62.6
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 5.3e-63 245.4 174 67.2
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 5.3e-63 245.4 200 63.5
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 6.9e-63 245.0 249 56.6
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 6.9e-63 245.0 198 59.6
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 6.9e-63 245.0 198 59.6
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 1.5e-62 243.8 196 61.2
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 7.6e-62 241.5 173 70.5
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 5.5e-60 235.3 210 59.5
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 1.2e-59 234.2 175 61.7
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 3.6e-59 232.6 196 60.2
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 3.9e-58 229.2 161 67.1
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.3e-53 214.2 148 69.6
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 5.0e-53 212.2 193 57.0
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 8.5e-53 211.5 175 61.1
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 8.5e-53 211.5 186 56.5
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 2.2e-48 196.8 205 52.7
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 7.2e-44 181.8 157 56.7
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 4.5e-30 136.0 103 67.0
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 7.5e-25 118.6 141 47.5
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 1.1e-23 114.8 125 52.0
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 3.6e-19 99.8 93 51.6
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-17 92.4 127 41.7
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 7.5e-17 92.0 71 59.2
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-15 86.3 79 46.8
CDE05G2085 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 7.3e-12 75.5 42 97.6
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.6e-11 74.3 52 73.1
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 8.9e-10 68.6 59 64.4
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.8e-07 60.8 103 39.8


User provided reference genes

Program Settings