Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.1e-66 256.5 127 100.0
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.8e-43 178.7 117 68.4
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 6.2e-43 177.6 115 69.6
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.1e-42 176.8 115 67.8
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.5e-41 172.9 115 67.0
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.6e-41 172.2 120 65.8
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.4e-41 171.8 113 67.3
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 3.4e-41 171.8 113 67.3
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 9.9e-41 170.2 113 66.4
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.2e-40 169.1 113 66.4
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 6.4e-40 167.5 116 67.2
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 8.4e-40 167.2 112 65.2
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.4e-39 166.4 110 66.4
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.9e-39 166.0 113 67.3
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.4e-39 165.6 110 65.5
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.4e-39 165.6 112 64.3
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 3.2e-39 165.2 114 67.5
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 4.2e-39 164.9 110 68.2
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 9.3e-39 163.7 117 63.2
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 9.3e-39 163.7 111 66.7
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 9.3e-39 163.7 106 71.7
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.2e-38 163.3 106 70.8
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 1.6e-38 162.9 117 63.2
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 2.1e-38 162.5 123 59.3
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.1e-38 162.5 110 66.4
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.7e-38 162.2 111 67.6
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.7e-38 162.2 111 67.6
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 2.7e-38 162.2 109 66.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.7e-38 162.2 111 65.8
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 6.0e-38 161.0 109 67.0
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 7.9e-38 160.6 122 63.1
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 7.9e-38 160.6 110 66.4
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 7.9e-38 160.6 107 66.4
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.0e-37 160.2 117 65.0
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.0e-37 160.2 111 65.8
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 1.8e-37 159.5 117 63.2
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.8e-37 159.5 119 64.7
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 2.3e-37 159.1 105 67.6
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.3e-37 159.1 100 72.0
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 3.0e-37 158.7 100 72.0
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 5.1e-37 157.9 127 57.5
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 5.1e-37 157.9 115 61.7
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 6.7e-37 157.5 106 67.0
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 6.7e-37 157.5 115 60.9
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 6.7e-37 157.5 114 64.9
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 6.7e-37 157.5 114 64.9
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 8.7e-37 157.1 117 59.8
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.5e-36 156.4 110 67.3
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.9e-36 156.0 113 64.6
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 1.9e-36 156.0 113 61.9
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.9e-36 156.0 114 63.2
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.9e-36 156.0 114 63.2
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.9e-36 156.0 109 62.4
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.5e-36 155.6 113 62.8
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 3.3e-36 155.2 98 70.4
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 3.3e-36 155.2 98 70.4
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 3.3e-36 155.2 98 70.4
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 3.3e-36 155.2 98 70.4
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 3.3e-36 155.2 104 66.3
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.3e-36 155.2 114 62.3
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 4.3e-36 154.8 107 65.4
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 4.3e-36 154.8 102 64.7
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 4.3e-36 154.8 100 69.0
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 5.6e-36 154.5 106 64.2
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 5.6e-36 154.5 114 63.2
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 5.6e-36 154.5 100 69.0
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 7.4e-36 154.1 103 64.1
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 7.4e-36 154.1 109 64.2
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 7.4e-36 154.1 105 65.7
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 9.6e-36 153.7 127 59.1
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 9.6e-36 153.7 109 62.4
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.3e-35 153.3 111 62.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.3e-35 153.3 107 61.7
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.6e-35 152.9 111 63.1
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.1e-35 152.5 118 61.9
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 2.1e-35 152.5 106 62.3
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 2.1e-35 152.5 103 66.0
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 2.8e-35 152.1 110 64.5
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.7e-35 151.8 103 63.1
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.7e-35 151.8 103 63.1
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 6.2e-35 151.0 98 68.4
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 8.1e-35 150.6 101 68.3
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.4e-34 149.8 100 64.0
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 1.4e-34 149.8 111 61.3
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.8e-34 149.4 107 63.6
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 3.1e-34 148.7 104 61.5
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 6.9e-34 147.5 112 62.5
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 6.9e-34 147.5 142 52.1
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.6e-33 145.6 110 60.0
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 2.6e-33 145.6 124 52.4
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 3.4e-33 145.2 125 56.0
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 7.6e-33 144.1 110 60.0
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 8.4e-32 140.6 106 59.4
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.4e-31 139.0 95 62.1
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.6e-30 136.3 107 58.9
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.1e-30 136.0 100 61.0
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.7e-30 135.6 146 45.9
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 3.0e-29 132.1 189 39.7
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 6.7e-29 131.0 147 46.3
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 8.7e-29 130.6 140 48.6
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 2.5e-28 129.0 148 43.9
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.3e-27 126.7 86 67.4
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.0e-25 119.4 119 50.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 5.8e-25 117.9 86 62.8
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 5.8e-25 117.9 89 60.7
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 2.2e-24 115.9 82 63.4
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.4e-23 113.2 100 53.0
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.2e-22 110.2 104 52.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 2.7e-22 109.0 92 60.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.5e-20 102.4 82 61.0
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 3.3e-20 102.1 72 63.9
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.8e-19 99.0 63 68.3
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.5e-17 93.2 64 62.5
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 2.6e-17 92.4 52 75.0
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.0e-16 90.5 105 42.9
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.0e-16 90.5 92 50.0
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.9e-16 89.0 91 45.1
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 3.8e-16 88.6 65 56.9
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.1e-15 87.0 63 57.1
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 9.4e-15 84.0 103 42.7
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 4.6e-14 81.6 91 40.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.5e-12 76.6 103 41.7
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.8e-10 69.7 57 56.1
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 6.9e-10 67.8 51 62.7
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.5e-09 66.6 63 44.4


User provided reference genes

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