Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0069 Ceratophyllum demersum HOM05D001772 ORTHO05D005958 4.2e-100 368.2 213 100.0
Nn1g01834 Nelumbo nucifera HOM05D001772 ORTHO05D005958 2.4e-55 219.5 203 61.6
Nn3g19052 Nelumbo nucifera HOM05D001772 ORTHO05D005958 1.1e-52 210.7 203 58.1
PGR042G0802 Punica granatum HOM05D001772 ORTHO05D005958 1.9e-52 209.9 203 64.0
Lj3g0001091 Lotus japonicus HOM05D001772 ORTHO05D005958 6.1e-51 204.9 234 56.8
Aqoxy5G04175 Aquilegia oxysepala HOM05D001772 ORTHO05D005958 1.0e-50 204.1 203 55.7
Eucgr.E00068 Eucalyptus grandis HOM05D001772 ORTHO05D005958 2.3e-50 203.0 204 56.9
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 5.2e-50 201.8 205 57.6
Potri.014G096500 Populus trichocarpa HOM05D001772 ORTHO05D005958 1.1e-49 200.7 203 56.7
CSS0019350 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D005958 3.3e-49 199.1 203 57.6
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.3e-49 199.1 212 62.7
TAR375G0592 Trochodendron aralioides HOM05D001772 ORTHO05D005958 3.3e-49 199.1 204 56.4
Lalb_Chr17g0342481 Lupinus albus HOM05D001772 ORTHO05D005958 7.5e-49 198.0 232 57.3
FvH4_7g16190 Fragaria vesca HOM05D001772 ORTHO05D005958 9.7e-49 197.6 203 60.1
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 9.7e-49 197.6 203 59.6
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 9.7e-49 197.6 203 60.1
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.7e-48 196.8 203 60.6
Glyma.07G057200 Glycine max HOM05D001772 ORTHO05D005958 6.3e-48 194.9 211 55.0
MD07G1147500 Malus domestica HOM05D001772 ORTHO05D005958 8.2e-48 194.5 203 57.1
FAN10G1004 Fragaria x ananassa HOM05D001772 ORTHO05D005958 1.1e-47 194.1 211 62.1
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.1e-47 194.1 211 62.1
RcHm_v2.0_Chr1g0359191 Rosa chinensis HOM05D001772 ORTHO05D005958 1.8e-47 193.4 203 61.1
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 4.1e-47 192.2 203 55.2
MBI06_g46728_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D005958 4.1e-47 192.2 193 55.4
Manes.01G247500 Manihot esculenta HOM05D001772 ORTHO05D005958 4.1e-47 192.2 206 55.3
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 5.3e-47 191.8 212 60.8
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 7.0e-47 191.4 212 60.8
Solyc01g095670.4 Solanum lycopersicum HOM05D001772 ORTHO05D005958 7.0e-47 191.4 209 61.7
Sopen01g039410 Solanum pennellii HOM05D001772 ORTHO05D005958 7.0e-47 191.4 209 61.7
TAR636G2875 Trochodendron aralioides HOM05D001772 ORTHO05D005958 7.0e-47 191.4 206 55.3
Potri.002G169100 Populus trichocarpa HOM05D001772 ORTHO05D005958 1.2e-46 190.7 203 56.2
Prupe.2G185500 Prunus persica HOM05D001772 ORTHO05D005958 4.5e-46 188.7 203 54.2
Lalb_Chr10g0100391 Lupinus albus HOM05D001772 ORTHO05D005958 5.9e-46 188.3 239 46.0
Nitab4.5_0011592g0020 Nicotiana tabacum HOM05D001772 ORTHO05D005958 5.9e-46 188.3 213 52.1
CiPaw.01G074300 Carya illinoinensis HOM05D001772 ORTHO05D005958 1.3e-45 187.2 205 55.1
Phvul.010G112100 Phaseolus vulgaris HOM05D001772 ORTHO05D005958 1.7e-45 186.8 208 57.7
Ciclev10020161m.g Citrus clementina HOM05D001772 ORTHO05D005958 2.9e-45 186.0 203 56.7
Duzib138G1424 Durio zibethinus HOM05D001772 ORTHO05D005958 2.9e-45 186.0 203 53.7
BcaC04g24121 Brassica carinata HOM05D001772 ORTHO05D005958 3.8e-45 185.7 218 51.4
Medtr8g027835 Medicago truncatula HOM05D001772 ORTHO05D005958 3.8e-45 185.7 236 53.4
VMungo0331G1517 Vigna mungo HOM05D001772 ORTHO05D005958 3.8e-45 185.7 204 54.9
Gorai.008G124200 Gossypium raimondii HOM05D001772 ORTHO05D005958 5.0e-45 185.3 203 52.2
Haze_15634 Corylus avellana HOM05D001772 ORTHO05D005958 8.5e-45 184.5 203 55.7
Glyma.16G026200 Glycine max HOM05D001772 ORTHO05D005958 1.9e-44 183.3 209 58.9
arahy.Tifrunner.gnm1.ann1.F3DNBB Arachis hypogaea HOM05D001772 ORTHO05D005958 2.5e-44 183.0 207 53.1
Thecc.01G345000 Theobroma cacao HOM05D001772 ORTHO05D005958 2.5e-44 183.0 201 53.7
Actinidia20227 Actinidia chinensis HOM05D001772 ORTHO05D005958 3.2e-44 182.6 202 53.0
Peaxi162Scf00786g00450 Petunia axillaris HOM05D001772 ORTHO05D005958 3.2e-44 182.6 204 52.9
arahy.Tifrunner.gnm1.ann1.8C9R1J Arachis hypogaea HOM05D001772 ORTHO05D005958 4.2e-44 182.2 220 49.5
Nitab4.5_0000360g0010 Nicotiana tabacum HOM05D001772 ORTHO05D005958 4.2e-44 182.2 201 52.2
Gohir.A12G111400 Gossypium hirsutum HOM05D001772 ORTHO05D005958 5.5e-44 181.8 203 52.7
AL6G52330 Arabidopsis lyrata HOM05D001772 ORTHO05D005958 7.2e-44 181.4 218 58.3
arahy.Tifrunner.gnm1.ann1.DXZ71K Arachis hypogaea HOM05D001772 ORTHO05D005958 1.2e-43 180.6 193 53.4
Gohir.D12G114700 Gossypium hirsutum HOM05D001772 ORTHO05D005958 2.1e-43 179.9 203 51.2
Nitab4.5_0000838g0040 Nicotiana tabacum HOM05D001772 ORTHO05D005958 2.7e-43 179.5 212 54.7
Oeu043209.1 Olea europaea HOM05D001772 ORTHO05D005958 2.7e-43 179.5 203 57.1
CAN.G986.28 Capsicum annuum HOM05D001772 ORTHO05D005958 3.6e-43 179.1 204 55.9
Rhsim01G0171300 Rhododendron simsii HOM05D001772 ORTHO05D005958 3.6e-43 179.1 187 56.1
Gohir.D08G147000 Gossypium hirsutum HOM05D001772 ORTHO05D005958 4.7e-43 178.7 202 51.0
Gorai.004G152500 Gossypium raimondii HOM05D001772 ORTHO05D005958 4.7e-43 178.7 202 51.0
TWI23G1206 Tripterygium wilfordii HOM05D001772 ORTHO05D005958 4.7e-43 178.7 204 51.0
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 6.1e-43 178.3 203 49.3
Aqoxy7G00134 Aquilegia oxysepala HOM05D001772 ORTHO05D005958 1.4e-42 177.2 203 52.7
Cc02_g39150 Coffea canephora HOM05D001772 ORTHO05D005958 1.8e-42 176.8 208 51.9
Hma1.2p1_0077F.1_g039660 Hydrangea macrophylla HOM05D001772 ORTHO05D005958 2.3e-42 176.4 212 50.9
arahy.Tifrunner.gnm1.ann1.G8BSRK Arachis hypogaea HOM05D001772 ORTHO05D005958 4.0e-42 175.6 215 51.2
ClCG05G000930 Citrullus lanatus HOM05D001772 ORTHO05D005958 5.2e-42 175.3 206 54.4
Psat4g160440 Pisum sativum HOM05D001772 ORTHO05D005958 5.2e-42 175.3 241 51.0
QL04p056704 Quercus lobata HOM05D001772 ORTHO05D005958 6.8e-42 174.9 188 54.8
PGSC0003DMG400000214 Solanum tuberosum HOM05D001772 ORTHO05D005958 6.8e-42 174.9 186 53.8
SGA_v2.0_scaffold43G16374 Striga asiatica HOM05D001772 ORTHO05D005958 1.2e-41 174.1 203 52.7
Gohir.A08G125900 Gossypium hirsutum HOM05D001772 ORTHO05D005958 1.5e-41 173.7 202 51.5
C09p00870 Brassica napus HOM05D001772 ORTHO05D005958 3.4e-41 172.6 220 55.9
COL.COLO4_06308 Corchorus olitorius HOM05D001772 ORTHO05D005958 3.4e-41 172.6 202 57.4
Hund16701 Selenicereus undatus HOM05D001772 ORTHO05D005958 3.4e-41 172.6 205 50.2
PSO170G2207 Papaver somniferum HOM05D001772 ORTHO05D005958 5.7e-41 171.8 214 56.5
vmacro20858 Vaccinium macrocarpon HOM05D001772 ORTHO05D005958 5.7e-41 171.8 187 56.1
PSO063G7149 Papaver somniferum HOM05D001772 ORTHO05D005958 7.5e-41 171.4 214 56.1
Actinidia28128 Actinidia chinensis HOM05D001772 ORTHO05D005958 9.8e-41 171.0 195 53.3
BolC9t53021H Brassica oleracea HOM05D001772 ORTHO05D005958 9.8e-41 171.0 222 55.0
CARHR249260 Cardamine hirsuta HOM05D001772 ORTHO05D005958 9.8e-41 171.0 219 52.5
Ca_26358_v3 Cicer arietinum L. HOM05D001772 ORTHO05D005958 9.8e-41 171.0 203 52.2
TPR.G7664 Trifolium pratense HOM05D001772 ORTHO05D005958 1.7e-40 170.2 225 55.6
A09p00240 Brassica napus HOM05D001772 ORTHO05D005958 2.8e-40 169.5 219 52.5
BcaC01g06840 Brassica carinata HOM05D001772 ORTHO05D005958 3.7e-40 169.1 201 52.7
BcaC04g24115 Brassica carinata HOM05D001772 ORTHO05D005958 3.7e-40 169.1 220 55.0
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 3.7e-40 169.1 201 52.7
CsaV3_3G008160 Cucumis sativus L. HOM05D001772 ORTHO05D005958 3.7e-40 169.1 205 55.1
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 4.8e-40 168.7 206 56.8
AUR62023482 Chenopodium quinoa HOM05D001772 ORTHO05D005958 1.1e-39 167.5 235 49.4
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.8e-39 166.8 201 55.2
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 1.8e-39 166.8 201 55.2
AT4G01050 Arabidopsis thaliana HOM05D001772 ORTHO05D005958 3.1e-39 166.0 227 50.2
Carub.0006s3611 Capsella rubella HOM05D001772 ORTHO05D005958 3.1e-39 166.0 233 53.6
Duzib133G1484 Durio zibethinus HOM05D001772 ORTHO05D005958 3.1e-39 166.0 186 52.7
Nitab4.5_0001123g0060 Nicotiana tabacum HOM05D001772 ORTHO05D005958 3.1e-39 166.0 225 45.8
SGA_v2.0_scaffold5G03005 Striga asiatica HOM05D001772 ORTHO05D005958 3.1e-39 166.0 203 52.2
BraA09t35751Z Brassica rapa HOM05D001772 ORTHO05D005958 4.1e-39 165.6 219 52.1
unitig_8.g4994 Utricularia gibba HOM05D000331 ORTHO05D005958 4.1e-39 165.6 206 50.5
BcaB01g02344 Brassica carinata HOM05D001772 ORTHO05D005958 9.1e-39 164.5 205 54.1
MELO3C006035.2 Cucumis melo HOM05D001772 ORTHO05D005958 9.1e-39 164.5 205 56.1
GSVIVG01027075001 Vitis vinifera HOM05D001772 ORTHO05D005958 1.6e-38 163.7 125 66.4
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 2.0e-38 163.3 273 41.8
Thhalv10028649m.g Eutrema salsugineum HOM05D001772 ORTHO05D005958 2.7e-38 162.9 215 54.4
MD01G1078500 Malus domestica HOM05D001772 ORTHO05D005958 3.5e-38 162.5 203 53.7
DCAR_008656 Daucus carota HOM05D001772 ORTHO05D005958 7.7e-38 161.4 214 51.9
TAR374G0181 Trochodendron aralioides HOM05D001772 ORTHO05D005958 1.3e-37 160.6 187 54.0
TAR374G0629 Trochodendron aralioides HOM05D001772 ORTHO05D005958 1.3e-37 160.6 187 54.0
HanXRQChr11g0353041 Helianthus annuus HOM05D001772 ORTHO05D005958 2.9e-37 159.5 208 47.6
THA.LOC104809830 Tarenaya hassleriana HOM05D001772 ORTHO05D005958 2.9e-37 159.5 202 57.9
Sed0022865 Sechium edule HOM05D001772 ORTHO05D005958 3.8e-37 159.1 205 53.7
Peaxi162Scf00218g00416 Petunia axillaris HOM05D001772 ORTHO05D005958 6.5e-37 158.3 195 48.2
Sp6g01090 Schrenkiella parvula HOM05D001772 ORTHO05D005958 8.5e-37 157.9 125 67.2
Sopen10g005380 Solanum pennellii HOM05D001772 ORTHO05D005958 1.5e-36 157.1 230 43.9
PGSC0003DMG400019883 Solanum tuberosum HOM05D001772 ORTHO05D005958 1.5e-36 157.1 230 43.5
Cpa.g.sc490.2 Carica papaya HOM05D001772 ORTHO05D005958 7.2e-36 154.8 220 45.9
AUR62004468 Chenopodium quinoa HOM05D001772 ORTHO05D005958 7.2e-36 154.8 247 47.0
Oeu007904.1 Olea europaea HOM05D001772 ORTHO05D005958 7.2e-36 154.8 196 48.5
Atru.chr5.643 Acer truncatum HOM05D001772 ORTHO05D005958 1.2e-35 154.1 203 48.8
Manes.05G024700 Manihot esculenta HOM05D001772 ORTHO05D005958 1.6e-35 153.7 204 47.5
Solyc10g009570.3 Solanum lycopersicum HOM05D001772 ORTHO05D005958 1.6e-35 153.7 232 44.0
Actinidia28499 Actinidia chinensis HOM05D001772 ORTHO05D005958 2.1e-35 153.3 128 67.2
ATR0589G056 Amborella trichopoda HOM05D001772 ORTHO05D005958 2.1e-35 153.3 127 65.4
EL10Ac1g00296 Beta vulgaris HOM05D001772 ORTHO05D005958 2.7e-35 152.9 225 48.4
HPP92_008635 Vanilla planifolia HOM05D001772 ORTHO05D005958 3.6e-35 152.5 212 49.1
Lsat_1_v5_gn_3_139620 Lactuca sativa HOM05D001772 ORTHO05D005958 8.0e-35 151.4 228 46.5
Migut.N01556 Erythranthe guttata HOM05D001772 ORTHO05D005958 1.8e-34 150.2 207 55.6
Sabra02G0143000 Salix brachista HOM05D001772 ORTHO05D005958 2.6e-33 146.4 203 48.3
SalBow3G4655 Salvia bowleyana HOM05D001772 ORTHO05D005958 2.6e-33 146.4 204 47.5
CAN.G818.1 Capsicum annuum HOM05D001772 ORTHO05D005958 1.3e-32 144.1 202 43.6
Zm00001eb238170 Zea mays HOM05D001772 ORTHO05D005958 1.3e-32 144.1 240 40.4
Lj9A595G54 Lonicera japonica HOM05D001772 ORTHO05D005958 1.4e-31 140.6 143 58.7
Aa31LG5G910 Aethionema arabicum HOM05D001772 ORTHO05D005958 2.7e-30 136.3 243 41.6
SMO111G0042 Selaginella moellendorffii HOM05D001772 ORTHO05D005958 3.5e-30 136.0 200 46.0
SEGI_04059 Sequoiadendron giganteum HOM05D001772 ORTHO05D005958 1.7e-29 133.7 198 50.0
MSTRG.17331 Avicennia marina HOM05D001772 ORTHO05D005958 2.3e-29 133.3 127 54.3
Mapoly0027s0106 Marchantia polymorpha HOM05D001772 ORTHO05D005958 2.3e-26 123.2 257 37.7
Os02g0257300 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D005958 4.4e-25 119.0 170 44.7
Ah.05g179770 Amaranthus hybridus HOM05D001772 ORTHO05D005958 9.2e-23 111.3 212 37.3
Pp3c20_13120 Physcomitrium patens HOM05D001772 ORTHO05D005958 1.6e-22 110.5 112 51.8
Pp3c10_10490 Physcomitrium patens HOM05D001772 ORTHO05D005958 2.0e-22 110.2 124 48.4
Pp3c14_24370 Physcomitrium patens HOM05D001772 ORTHO05D005958 4.6e-22 109.0 121 46.3
SalBow3G2334 Salvia bowleyana HOM05D001772 ORTHO05D005958 1.0e-21 107.8 107 53.3
AagrBONN_evm.TU.Sc2ySwM_228.819 Anthoceros agrestis HOM05D001772 ORTHO05D005958 1.1e-20 104.4 164 43.9
MBI06_g29328_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D005958 2.5e-20 103.2 100 58.0
Sc23g0002200 Simmondsia chinensis HOM05D001772 ORTHO05D005958 2.3e-18 96.7 78 62.8
Nn5g29118 Nelumbo nucifera HOM05D001772 ORTHO05D005958 2.6e-17 93.2 61 77.0
Hund27213 Selenicereus undatus HOM05D001772 ORTHO05D005958 1.7e-13 80.5 208 34.6
CBR_g40436 Chara braunii HOM05D001772 ORTHO05D005958 7.3e-12 75.1 107 42.1


User provided reference genes

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