Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4794 Ceratophyllum demersum HOM05D000905 ORTHO05D000749 3.7e-97 358.2 185 100.0
CDE12G0665 Ceratophyllum demersum HOM05D000905 ORTHO05D000749 2.6e-66 255.8 167 80.2
QL08p011855 Quercus lobata HOM05D000905 ORTHO05D000749 9.1e-27 124.4 166 48.2
TAR629G1358 Trochodendron aralioides HOM05D000905 ORTHO05D000749 3.6e-23 112.5 173 46.2
Nn1g07106 Nelumbo nucifera HOM05D000905 ORTHO05D000749 5.7e-21 105.1 172 44.2
Nn1g03581 Nelumbo nucifera HOM05D000905 ORTHO05D000749 7.5e-21 104.8 167 43.1
TAR627G0016 Trochodendron aralioides HOM05D000905 ORTHO05D000749 7.5e-21 104.8 167 45.5
Duzib268G1675 Durio zibethinus HOM05D000905 ORTHO05D000749 2.2e-20 103.2 134 51.5
Duzib170G0897 Durio zibethinus HOM05D000905 ORTHO05D000749 3.7e-20 102.4 148 48.6
CiPaw.11G187300 Carya illinoinensis HOM05D000905 ORTHO05D000749 8.2e-20 101.3 172 41.3
CiPaw.12G128100 Carya illinoinensis HOM05D000905 ORTHO05D000749 1.4e-19 100.5 176 42.0
Haze_09648 Corylus avellana HOM05D000905 ORTHO05D000749 7.0e-19 98.2 177 42.4
Dinv40736 Davidia involucrata HOM05D000905 ORTHO05D000749 1.2e-18 97.4 170 41.8
Cfa020384 Carpinus fangiana HOM05D000905 ORTHO05D000749 1.6e-18 97.1 177 41.8
Sabra16G0286000 Salix brachista HOM05D000905 ORTHO05D000749 3.5e-18 95.9 145 44.8
COL.COLO4_09633 Corchorus olitorius HOM05D000905 ORTHO05D000749 4.5e-18 95.5 146 45.9
Gohir.D01G065100 Gossypium hirsutum HOM05D000905 ORTHO05D000749 4.5e-18 95.5 146 44.5
ATR0752G147 Amborella trichopoda HOM05D000905 ORTHO05D000749 5.9e-18 95.1 178 42.1
Gorai.002G086800 Gossypium raimondii HOM05D000905 ORTHO05D000749 5.9e-18 95.1 146 44.5
Thecc.07G043700 Theobroma cacao HOM05D000905 ORTHO05D000749 2.2e-17 93.2 134 47.8
Potri.011G136700 Populus trichocarpa HOM05D000905 ORTHO05D000749 2.9e-17 92.8 145 45.5
Actinidia35329 Actinidia chinensis HOM05D000905 ORTHO05D000749 6.5e-17 91.7 175 40.0
Gohir.A04G018700 Gossypium hirsutum HOM05D000905 ORTHO05D000749 6.5e-17 91.7 145 44.1
Gorai.009G434900 Gossypium raimondii HOM05D000905 ORTHO05D000749 6.5e-17 91.7 147 43.5
Dinv22280 Davidia involucrata HOM05D000905 ORTHO05D000749 1.1e-16 90.9 170 41.8
PSO210G2593 Papaver somniferum HOM05D000905 ORTHO05D000749 1.1e-16 90.9 163 41.1
Glyma.08G313200 Glycine max HOM05D000905 ORTHO05D000749 1.9e-16 90.1 160 43.1
Potri.001G421200 Populus trichocarpa HOM05D000905 ORTHO05D000749 4.2e-16 89.0 145 44.8
Medtr3g050060 Medicago truncatula HOM05D000905 ORTHO05D000749 5.5e-16 88.6 167 39.5
Phvul.006G039200 Phaseolus vulgaris HOM05D000905 ORTHO05D000749 5.5e-16 88.6 149 47.0
Prupe.4G209400 Prunus persica HOM05D000905 ORTHO05D000749 1.2e-15 87.4 165 39.4
GSVIVG01037609001 Vitis vinifera HOM05D000905 ORTHO05D000749 1.2e-15 87.4 182 36.8
PSO832G2245 Papaver somniferum HOM05D000905 ORTHO05D000749 1.6e-15 87.0 163 41.1
VMungo0540G1730 Vigna mungo HOM05D000905 ORTHO05D000749 2.7e-15 86.3 160 43.8
Gohir.A13G139000 Gossypium hirsutum HOM05D000905 ORTHO05D000749 3.6e-15 85.9 140 45.0
Atru.chr2.3279 Acer truncatum HOM05D000905 ORTHO05D000749 6.1e-15 85.1 113 51.3
Aqoxy4G02530_Aqoxy4G02531 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 6.1e-15 85.1 163 38.7
CSS0003768 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 1.4e-14 84.0 171 36.3
Gohir.D03G108700 Gossypium hirsutum HOM05D000905 ORTHO05D000749 1.4e-14 84.0 126 47.6
Lj4g0027943 Lotus japonicus HOM05D000905 ORTHO05D000749 1.8e-14 83.6 128 47.7
Oeu062601.1 Olea europaea HOM05D000905 ORTHO05D000749 4.0e-14 82.4 134 45.5
Glyma.18G101400 Glycine max HOM05D000905 ORTHO05D000749 5.2e-14 82.0 160 42.5
Hma1.2p1_0938F.1_g239205 Hydrangea macrophylla HOM05D000905 ORTHO05D000749 5.2e-14 82.0 157 42.0
Ciclev10007404m.g Citrus clementina HOM05D000905 ORTHO05D000749 6.8e-14 81.6 124 46.8
Gorai.013G160800 Gossypium raimondii HOM05D000905 ORTHO05D000749 1.5e-13 80.5 140 43.6
MD03G1206600 Malus domestica HOM05D000905 ORTHO05D000749 1.5e-13 80.5 159 39.0
vmacro09734 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 1.5e-13 80.5 169 37.3
Gohir.D13G143800 Gossypium hirsutum HOM05D000905 ORTHO05D000749 2.0e-13 80.1 140 43.6
Sed0008924 Sechium edule HOM05D000905 ORTHO05D000749 2.0e-13 80.1 168 38.7
ClCG05G014420 Citrullus lanatus HOM05D000905 ORTHO05D000749 3.4e-13 79.3 164 38.4
Lj4g0024955 Lotus japonicus HOM05D000905 ORTHO05D000749 3.4e-13 79.3 129 45.7
CSS0029322 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 4.4e-13 79.0 169 37.9
Lj6g0022720 Lotus japonicus HOM05D000905 ORTHO05D000749 4.4e-13 79.0 148 40.5
MBI02_g28335_MAGBIO Magnolia biondii HOM05D000905 ORTHO05D000749 4.4e-13 79.0 97 47.4
MD11G1222000 Malus domestica HOM05D000905 ORTHO05D000749 4.4e-13 79.0 167 39.5
Rhsim04G0002200 Rhododendron simsii HOM05D000905 ORTHO05D000749 5.7e-13 78.6 174 37.9
RhsimUnG0252200 Rhododendron simsii HOM05D000905 ORTHO05D000749 5.7e-13 78.6 174 37.9
TWI38G0391 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 7.5e-13 78.2 173 37.0
Lalb_Chr20g0113961 Lupinus albus HOM05D000905 ORTHO05D000749 1.7e-12 77.0 175 37.1
arahy.Tifrunner.gnm1.ann1.83EP2I Arachis hypogaea HOM05D000905 ORTHO05D000749 2.2e-12 76.6 85 56.5
arahy.Tifrunner.gnm1.ann1.FI466Z Arachis hypogaea HOM05D000905 ORTHO05D000749 2.2e-12 76.6 85 56.5
arahy.Tifrunner.gnm1.ann1.IS6ADN Arachis hypogaea HOM05D000905 ORTHO05D000749 2.2e-12 76.6 85 56.5
Eucgr.F00965 Eucalyptus grandis HOM05D000905 ORTHO05D000749 2.2e-12 76.6 149 39.6
Manes.03G126600 Manihot esculenta HOM05D000905 ORTHO05D000749 4.8e-12 75.5 145 42.1
PGR083G2090 Punica granatum HOM05D000905 ORTHO05D000749 4.8e-12 75.5 148 42.6
PSO675G6898 Papaver somniferum HOM05D000905 ORTHO05D000749 6.3e-12 75.1 152 39.5
RcHm_v2.0_Chr5g0038291 Rosa chinensis HOM05D000905 ORTHO05D000749 6.3e-12 75.1 160 40.0
Gohir.D05G367300 Gossypium hirsutum HOM05D000905 ORTHO05D000749 1.4e-11 73.9 97 50.5
PSO541G6243 Papaver somniferum HOM05D000905 ORTHO05D000749 1.4e-11 73.9 168 38.7
SGA_v2.0_scaffold9G05062 Striga asiatica HOM05D000905 ORTHO05D000749 1.4e-11 73.9 94 53.2
MELO3C018075.2 Cucumis melo HOM05D000905 ORTHO05D000749 1.8e-11 73.6 166 36.7
Cpa.g.sc97.34 Carica papaya HOM05D000905 ORTHO05D000749 3.1e-11 72.8 120 44.2
CsaV3_3G023290 Cucumis sativus L. HOM05D000905 ORTHO05D000749 4.1e-11 72.4 166 36.1
SGA_v2.0_scaffold8G04302 Striga asiatica HOM05D000905 ORTHO05D000749 4.1e-11 72.4 127 41.7
Cc05_g13520 Coffea canephora HOM05D000905 ORTHO05D000749 5.4e-11 72.0 123 42.3
Sabra11G0122700 Salix brachista HOM05D000905 ORTHO05D000749 5.4e-11 72.0 145 41.4
Ca_14811_v3 Cicer arietinum L. HOM05D000905 ORTHO05D000749 7.0e-11 71.6 165 35.8
Lj1A869T79 Lonicera japonica HOM05D000905 ORTHO05D000749 7.0e-11 71.6 123 42.3
Manes.15G073600 Manihot esculenta HOM05D000905 ORTHO05D000749 1.2e-10 70.9 134 42.5
Psat5g183280 Pisum sativum HOM05D000905 ORTHO05D000749 1.6e-10 70.5 122 42.6
TPR.G16589 Trifolium pratense HOM05D000905 ORTHO05D000749 1.6e-10 70.5 166 34.9
Sc03g0008750 Simmondsia chinensis HOM05D000905 ORTHO05D000749 4.5e-10 68.9 120 42.5
Gohir.A01G078000 Gossypium hirsutum HOM05D000905 ORTHO05D000749 5.9e-10 68.6 141 40.4
Sed0024641 Sechium edule HOM05D000905 ORTHO05D000749 5.9e-10 68.6 124 39.5
CDE05G2062 Ceratophyllum demersum HOM05D000905 ORTHO05D000749 1.0e-09 67.8 132 38.6
FvH4_3g22240 Fragaria vesca HOM05D000905 ORTHO05D000749 2.9e-09 66.2 152 39.5
FAN11G2009 Fragaria x ananassa HOM05D000905 ORTHO05D000749 2.9e-09 66.2 152 39.5
FAN21G4003 Fragaria x ananassa HOM05D000905 ORTHO05D000749 2.9e-09 66.2 152 38.8
CDE05G2004 Ceratophyllum demersum HOM05D000905 ORTHO05D000749 5.0e-09 65.5 133 39.1
Nitab4.5_0005048g0060 Nicotiana tabacum HOM05D000905 ORTHO05D000749 8.6e-09 64.7 105 46.7
Migut.H01841 Erythranthe guttata HOM05D000905 ORTHO05D000749 1.5e-08 63.9 109 38.5
TWI39G0932 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 1.5e-08 63.9 170 34.1
Ah.04g165690 Amaranthus hybridus HOM05D000905 ORTHO05D000749 1.9e-08 63.5 148 34.5
Aqoxy1G03293 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 1.9e-08 63.5 163 35.0
CANSAT11G2225 Cannabis sativa HOM05D000905 ORTHO05D000749 1.9e-08 63.5 141 35.5
Zm00001eb322820 Zea mays HOM05D000905 ORTHO05D000749 1.9e-08 63.5 163 31.9
FAN25G2510 Fragaria x ananassa HOM05D000905 ORTHO05D000749 2.5e-08 63.2 152 38.2
SHI31840 Sapria himalayana HOM05D000905 ORTHO05D000749 4.2e-08 62.4 78 48.7
EL10Ac4g07897 Beta vulgaris HOM05D000905 ORTHO05D000749 5.5e-08 62.0 132 40.9
CAN.G1781.8 Capsicum annuum HOM05D000905 ORTHO05D000749 5.5e-08 62.0 55 61.8
FAN16G1780 Fragaria x ananassa HOM05D000905 ORTHO05D000749 5.5e-08 62.0 149 38.3
unitig_8.g4577 Utricularia gibba HOM05D000905 ORTHO05D000749 5.5e-08 62.0 124 39.5
Zm00001eb106100 Zea mays HOM05D000905 ORTHO05D000749 5.5e-08 62.0 110 42.7
Nitab4.5_0001393g0200 Nicotiana tabacum HOM05D000905 ORTHO05D000749 9.5e-08 61.2 86 47.7
Os07g0520400 Oryza sativa ssp. japonica HOM05D000905 ORTHO05D000749 9.5e-08 61.2 172 30.2
AUR62015708 Chenopodium quinoa HOM05D000905 ORTHO05D000749 1.2e-07 60.8 156 35.9
Peaxi162Scf00450g00847 Petunia axillaris HOM05D000905 ORTHO05D000749 1.6e-07 60.5 115 43.5
Solyc10g006350.3 Solanum lycopersicum HOM05D000905 ORTHO05D000749 1.6e-07 60.5 126 38.1
Sopen10g002300 Solanum pennellii HOM05D000905 ORTHO05D000749 1.6e-07 60.5 126 38.1
THA.LOC104817657 Tarenaya hassleriana HOM05D000905 ORTHO05D000749 1.6e-07 60.5 145 37.9
THA.LOC104817878 Tarenaya hassleriana HOM05D000905 ORTHO05D000749 1.6e-07 60.5 100 46.0
MSTRG.14429 Avicennia marina HOM05D000905 ORTHO05D000749 2.1e-07 60.1 118 42.4
Peaxi162Scf00387g00313 Petunia axillaris HOM05D000905 ORTHO05D000749 6.1e-07 58.5 95 40.0
BcaC05g27389 Brassica carinata HOM05D000905 ORTHO05D000749 8.0e-07 58.2 87 43.7
PGSC0003DMG400014424 Solanum tuberosum HOM05D000905 ORTHO05D000749 8.0e-07 58.2 121 38.0
AUR62020498 Chenopodium quinoa HOM05D000905 ORTHO05D000749 1.0e-06 57.8 156 34.0
Thhalv10024370m.g Eutrema salsugineum HOM05D000905 ORTHO05D000749 1.4e-06 57.4 117 43.6
AT1G50890 Arabidopsis thaliana HOM05D000905 ORTHO05D000749 1.8e-06 57.0 68 47.1
DCAR_022552 Daucus carota HOM05D000905 ORTHO05D000749 1.8e-06 57.0 106 42.5
Lsat_1_v5_gn_5_5161 Lactuca sativa HOM05D000905 ORTHO05D000749 1.8e-06 57.0 115 37.4
AT4G27060 Arabidopsis thaliana HOM05D000905 ORTHO05D000749 2.3e-06 56.6 131 40.5
BcaB02g11191 Brassica carinata HOM05D000905 ORTHO05D000749 2.3e-06 56.6 88 44.3
Lsat_1_v5_gn_7_109061 Lactuca sativa HOM05D000905 ORTHO05D000749 2.3e-06 56.6 120 39.2
HPP92_017606 Vanilla planifolia HOM05D000905 ORTHO05D000749 4.0e-06 55.8 169 33.7
BcaC09g50620 Brassica carinata HOM05D000905 ORTHO05D000749 6.8e-06 55.1 118 43.2
C01p23210 Brassica napus HOM05D000905 ORTHO05D000749 6.8e-06 55.1 118 43.2
BolC1t02254H Brassica oleracea HOM05D000905 ORTHO05D000749 6.8e-06 55.1 118 43.2
Carub.0001s3984 Capsella rubella HOM05D000905 ORTHO05D000749 6.8e-06 55.1 68 45.6
A01p18210 Brassica napus HOM05D000905 ORTHO05D000749 8.8e-06 54.7 86 50.0


User provided reference genes

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