Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 7.0e-107 390.6 190 100.0
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 2.5e-56 222.6 174 66.7
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 1.6e-55 219.9 123 84.6
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.1e-55 219.5 150 70.0
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 6.2e-55 218.0 171 69.6
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 8.1e-55 217.6 132 79.5
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.8e-54 216.5 184 62.5
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 4.0e-54 215.3 170 66.5
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 4.0e-54 215.3 119 84.9
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 5.3e-54 214.9 138 76.1
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 6.9e-54 214.5 192 61.5
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.2e-53 213.8 179 63.1
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 1.5e-53 213.4 156 68.6
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 2.0e-53 213.0 145 73.8
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 2.0e-53 213.0 123 81.3
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 3.4e-53 212.2 178 62.9
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 4.4e-53 211.8 145 73.1
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 5.8e-53 211.5 143 72.0
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 5.8e-53 211.5 164 65.2
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 7.6e-53 211.1 145 73.1
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 7.6e-53 211.1 154 70.8
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 7.6e-53 211.1 148 68.2
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 1.3e-52 210.3 119 81.5
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.7e-52 209.9 145 72.4
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.7e-52 209.9 119 83.2
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 2.2e-52 209.5 124 79.8
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 3.8e-52 208.8 132 77.3
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 3.8e-52 208.8 118 83.1
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 4.9e-52 208.4 168 65.5
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 4.9e-52 208.4 145 71.7
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 4.9e-52 208.4 148 67.6
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 4.9e-52 208.4 118 82.2
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 4.9e-52 208.4 118 82.2
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 6.4e-52 208.0 144 70.1
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 6.4e-52 208.0 118 83.1
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 6.4e-52 208.0 148 70.3
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 6.4e-52 208.0 118 82.2
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.1e-51 207.2 153 67.3
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.1e-51 207.2 164 65.9
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.1e-51 207.2 172 65.1
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.9e-51 206.5 120 80.0
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.9e-51 206.5 164 67.1
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.9e-51 206.5 123 77.2
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.9e-51 206.5 190 59.5
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.4e-51 206.1 119 81.5
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 2.4e-51 206.1 118 80.5
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 2.4e-51 206.1 126 79.4
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 2.4e-51 206.1 177 61.0
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 4.2e-51 205.3 148 68.2
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 4.2e-51 205.3 118 81.4
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 7.1e-51 204.5 146 70.5
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 7.1e-51 204.5 145 69.7
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 7.1e-51 204.5 133 75.2
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 7.1e-51 204.5 122 77.9
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 7.1e-51 204.5 145 72.4
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 9.3e-51 204.1 152 66.4
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 9.3e-51 204.1 136 72.8
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 1.2e-50 203.8 120 80.8
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.2e-50 203.8 116 79.3
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.2e-50 203.8 160 67.5
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 2.1e-50 203.0 138 71.0
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 2.1e-50 203.0 136 72.8
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 2.7e-50 202.6 120 80.8
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 2.7e-50 202.6 120 80.8
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 3.5e-50 202.2 117 81.2
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 3.5e-50 202.2 118 80.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 6.0e-50 201.4 121 78.5
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 6.0e-50 201.4 117 78.6
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 7.9e-50 201.1 145 71.0
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 1.0e-49 200.7 155 65.8
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 1.0e-49 200.7 147 69.4
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 1.0e-49 200.7 118 79.7
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.0e-49 200.7 154 66.2
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 1.3e-49 200.3 148 69.6
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.3e-49 200.3 175 62.9
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.3e-49 200.3 148 68.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.3e-49 200.3 145 67.6
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 1.7e-49 199.9 191 57.6
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 1.7e-49 199.9 160 64.4
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 3.0e-49 199.1 122 76.2
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 3.0e-49 199.1 156 62.8
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 3.0e-49 199.1 156 62.8
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 3.0e-49 199.1 134 70.1
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 3.0e-49 199.1 153 66.7
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 3.9e-49 198.7 165 64.2
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 5.1e-49 198.4 120 78.3
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 8.7e-49 197.6 125 75.2
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 4.3e-48 195.3 153 66.0
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.3e-47 193.7 121 73.6
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.1e-47 193.0 137 70.1
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.3e-44 183.7 105 80.0
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.7e-44 183.3 132 68.9
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 2.9e-44 182.6 118 71.2
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 6.4e-44 181.4 126 65.9
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 6.4e-44 181.4 132 68.2
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 8.4e-44 181.0 120 68.3
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 1.1e-43 180.6 173 60.1
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 4.2e-43 178.7 162 58.0
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 3.5e-42 175.6 185 50.8
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 7.9e-42 174.5 129 67.4
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 1.5e-40 170.2 121 66.1
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 2.5e-40 169.5 152 61.2
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 1.3e-39 167.2 121 63.6
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 7.6e-37 157.9 138 53.6
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.1e-35 154.1 142 52.8
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 3.9e-33 145.6 88 81.8
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 3.9e-33 145.6 120 58.3
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 4.3e-32 142.1 116 56.9
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.3e-23 114.0 134 53.0
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.4e-22 109.8 89 62.9
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 4.5e-21 105.5 57 82.5
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 5.9e-21 105.1 93 60.2
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.3e-20 104.0 92 59.8
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 2.9e-20 102.8 120 48.3
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 2.7e-18 96.3 116 44.8
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 3.6e-10 69.3 68 52.9
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 9.1e-06 54.7 60 46.7


User provided reference genes

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