Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4685 Ceratophyllum demersum HOM05D000747 ORTHO05D128819 7.9e-42 173.3 86 100.0
CDE02G2001 Ceratophyllum demersum HOM05D000747 ORTHO05D007656 1.5e-19 99.4 132 50.8
TAR633G1427 Trochodendron aralioides HOM05D000747 ORTHO05D007656 7.7e-13 77.0 122 41.8
PSO339G4004 Papaver somniferum HOM05D000747 ORTHO05D007656 6.6e-12 73.9 122 41.0
MBI01_g23228_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D007656 8.6e-12 73.6 122 40.2
Nn6g35131 Nelumbo nucifera HOM05D000747 ORTHO05D007656 3.3e-11 71.6 122 39.3
Psat3g037640 Pisum sativum HOM05D000747 ORTHO05D007656 3.3e-11 71.6 127 39.4
QL07p041161 Quercus lobata HOM05D000747 ORTHO05D007656 3.3e-11 71.6 127 40.2
Dinv37368 Davidia involucrata HOM05D000747 ORTHO05D007656 4.2e-11 71.2 127 40.9
ClCG10G019570 Citrullus lanatus HOM05D000747 ORTHO05D007656 5.5e-11 70.9 127 40.2
PSO801G0354 Papaver somniferum HOM05D000747 ORTHO05D007656 5.5e-11 70.9 122 41.0
Medtr7g103210 Medicago truncatula HOM05D000747 ORTHO05D007656 9.5e-11 70.1 127 39.4
Prupe.7G121800 Prunus persica HOM05D000747 ORTHO05D007656 9.5e-11 70.1 127 39.4
Thecc.05G077000 Theobroma cacao HOM05D000747 ORTHO05D007656 9.5e-11 70.1 127 39.4
Cfa016498 Carpinus fangiana HOM05D000747 ORTHO05D007656 1.2e-10 69.7 127 39.4
Ca_08946_v3 Cicer arietinum L. HOM05D000747 ORTHO05D007656 1.2e-10 69.7 127 39.4
MD14G1095600 Malus domestica HOM05D000747 ORTHO05D007656 1.2e-10 69.7 127 39.4
Ciclev10010940m.g Citrus clementina HOM05D000747 ORTHO05D007656 1.6e-10 69.3 127 38.6
Phvul.001G184300 Phaseolus vulgaris HOM05D000747 ORTHO05D007656 1.6e-10 69.3 127 38.6
Potri.016G096500 Populus trichocarpa HOM05D000747 ORTHO05D007656 1.6e-10 69.3 127 38.6
RcHm_v2.0_Chr3g0471541 Rosa chinensis HOM05D000747 ORTHO05D007656 1.6e-10 69.3 127 39.4
ECA233G1002 Erigeron canadensis HOM05D000747 ORTHO05D007656 2.1e-10 68.9 127 39.4
Glyma.03G188900 Glycine max HOM05D000747 ORTHO05D007656 2.8e-10 68.6 127 37.8
Glyma.19G189100 Glycine max HOM05D000747 ORTHO05D007656 2.8e-10 68.6 127 37.8
MELO3C009417.2 Cucumis melo HOM05D000747 ORTHO05D007656 3.6e-10 68.2 127 39.4
Lalb_Chr01g0018491 Lupinus albus HOM05D000747 ORTHO05D007656 3.6e-10 68.2 123 38.2
Sed0020895 Sechium edule HOM05D000747 ORTHO05D007656 3.6e-10 68.2 127 38.6
TPR.G31502 Trifolium pratense HOM05D000747 ORTHO05D007656 3.6e-10 68.2 127 37.8
CsaV3_3G036630 Cucumis sativus L. HOM05D000747 ORTHO05D007656 4.7e-10 67.8 127 39.4
DCAR_020792 Daucus carota HOM05D000140 ORTHO05D007656 4.7e-10 67.8 127 38.6
CiPaw.09G006200 Carya illinoinensis HOM05D000747 ORTHO05D007656 6.1e-10 67.4 127 38.6
MD12G1101300 Malus domestica HOM05D000747 ORTHO05D007656 6.1e-10 67.4 127 38.6
FvH4_6g17370 Fragaria vesca HOM05D000747 ORTHO05D007656 8.0e-10 67.0 127 40.2
FAN02G3129 Fragaria x ananassa HOM05D000747 ORTHO05D007656 8.0e-10 67.0 127 40.2
FAN05G2234 Fragaria x ananassa HOM05D000747 ORTHO05D007656 8.0e-10 67.0 127 40.2
FAN05G4185 Fragaria x ananassa HOM05D000747 ORTHO05D007656 8.0e-10 67.0 127 40.2
FAN09G3532 Fragaria x ananassa HOM05D000747 ORTHO05D007656 8.0e-10 67.0 127 40.2
HanXRQChr13g0400251 Helianthus annuus HOM05D000747 ORTHO05D007656 1.0e-09 66.6 127 38.6
Lsat_1_v5_gn_6_29141 Lactuca sativa HOM05D000747 ORTHO05D007656 1.0e-09 66.6 121 39.7
Lj1g0024972 Lotus japonicus HOM05D000747 ORTHO05D007656 1.0e-09 66.6 127 39.4
Sc02g0001290 Simmondsia chinensis HOM05D000747 ORTHO05D007656 1.0e-09 66.6 113 38.9
Aqoxy2G01524 Aquilegia oxysepala HOM05D000747 ORTHO05D007656 1.4e-09 66.2 123 38.2
TWI74G1020 Tripterygium wilfordii HOM05D000747 ORTHO05D007656 1.8e-09 65.9 127 39.4
Atru.chr8.1679 Acer truncatum HOM05D000747 ORTHO05D007656 2.3e-09 65.5 119 37.8
Cpa.g.sc5.113 Carica papaya HOM05D000747 ORTHO05D007656 2.3e-09 65.5 119 37.0
CSS0008408 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D007656 3.0e-09 65.1 127 38.6
CSS0041176 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D007656 3.0e-09 65.1 127 38.6
Sabra16G0100500 Salix brachista HOM05D000747 ORTHO05D007656 4.0e-09 64.7 127 37.0
ATR0665G301 Amborella trichopoda HOM05D000747 ORTHO05D007656 5.2e-09 64.3 119 37.8
Gohir.A01G211500 Gossypium hirsutum HOM05D000747 ORTHO05D007656 5.2e-09 64.3 127 37.0
Gorai.002G245000 Gossypium raimondii HOM05D000747 ORTHO05D007656 5.2e-09 64.3 127 37.0
Hma1.2p1_0564F.1_g179090 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 6.8e-09 63.9 123 37.4
Hma1.2p1_0564F.1_g179100 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 6.8e-09 63.9 123 37.4
Os03g0683866 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D007656 6.8e-09 63.9 123 36.6
HPP92_010010 Vanilla planifolia HOM05D000747 ORTHO05D007656 6.8e-09 63.9 122 34.4
arahy.Tifrunner.gnm1.ann1.KKMU7F Arachis hypogaea HOM05D000747 ORTHO05D007656 8.9e-09 63.5 127 37.8
arahy.Tifrunner.gnm1.ann1.MP0EZL Arachis hypogaea HOM05D000747 ORTHO05D007656 8.9e-09 63.5 127 37.8
Eucgr.A01586 Eucalyptus grandis HOM05D000747 ORTHO05D007656 1.5e-08 62.8 97 42.3
Gohir.D01G200300 Gossypium hirsutum HOM05D000747 ORTHO05D007656 1.5e-08 62.8 127 36.2
Ah.08g211170 Amaranthus hybridus HOM05D000747 ORTHO05D007656 2.0e-08 62.4 101 38.6
PGR004G0414 Punica granatum HOM05D000747 ORTHO05D007656 2.0e-08 62.4 97 41.2
HPP92_009997 Vanilla planifolia HOM05D000747 ORTHO05D007656 2.0e-08 62.4 122 33.6
EL10Ac7g16731 Beta vulgaris HOM05D000747 ORTHO05D007656 2.6e-08 62.0 114 36.8
Hund20723 Selenicereus undatus HOM05D000747 ORTHO05D007656 2.6e-08 62.0 108 36.1
CAN.G1830.6 Capsicum annuum HOM05D000747 ORTHO05D007656 3.4e-08 61.6 135 37.8
Cc06_g04900 Coffea canephora HOM05D000747 ORTHO05D007656 4.4e-08 61.2 127 37.0
COL.COLO4_22271 Corchorus olitorius HOM05D000747 ORTHO05D007656 4.4e-08 61.2 125 35.2
Nitab4.5_0006545g0010 Nicotiana tabacum HOM05D000747 ORTHO05D007656 4.4e-08 61.2 127 35.4
Zm00001eb217270 Zea mays HOM05D000747 ORTHO05D007656 4.4e-08 61.2 122 35.2
Migut.L01736 Erythranthe guttata HOM05D000747 ORTHO05D007656 5.7e-08 60.8 119 38.7
Nitab4.5_0003554g0010 Nicotiana tabacum HOM05D000747 ORTHO05D007656 5.7e-08 60.8 127 35.4
Oeu045250.1 Olea europaea HOM05D000747 ORTHO05D007656 5.7e-08 60.8 119 36.1
SalBow5G3738 Salvia bowleyana HOM05D000747 ORTHO05D007656 5.7e-08 60.8 123 39.0
SGA_v2.0_scaffold277G46716 Striga asiatica HOM05D000747 ORTHO05D007656 5.7e-08 60.8 123 39.8
CANSAT80G1343 Cannabis sativa HOM05D000747 ORTHO05D007656 7.5e-08 60.5 127 37.0
Peaxi162Scf00500g00219 Petunia axillaris HOM05D000747 ORTHO05D007656 7.5e-08 60.5 135 37.0
AUR62037922 Chenopodium quinoa HOM05D000747 ORTHO05D007656 9.8e-08 60.1 101 37.6
AUR62040177 Chenopodium quinoa HOM05D000747 ORTHO05D007656 9.8e-08 60.1 101 37.6
Solyc09g008700.2 Solanum lycopersicum HOM05D000747 ORTHO05D007656 1.3e-07 59.7 127 34.6
Sopen09g003500 Solanum pennellii HOM05D000747 ORTHO05D007656 1.3e-07 59.7 127 34.6
Manes.08G017600 Manihot esculenta HOM05D000747 ORTHO05D007656 1.7e-07 59.3 119 37.0
Actinidia28937 Actinidia chinensis HOM05D002509 ORTHO05D007656 2.2e-07 58.9 122 36.9
Rhsim03G0085000 Rhododendron simsii HOM05D000747 ORTHO05D007656 2.2e-07 58.9 119 35.3
Aa31LG10G8250 Aethionema arabicum HOM05D000747 ORTHO05D007656 2.8e-07 58.5 108 38.9
A04p06290 Brassica napus HOM05D000747 ORTHO05D007656 2.8e-07 58.5 111 39.6
BraA04t16334Z Brassica rapa HOM05D000747 ORTHO05D007656 2.8e-07 58.5 111 39.6
CARHR162940 Cardamine hirsuta HOM05D000747 ORTHO05D007656 2.8e-07 58.5 111 38.7
FAN14G4063 Fragaria x ananassa HOM05D000747 ORTHO05D007656 2.8e-07 58.5 60 55.0
vmacro07348 Vaccinium macrocarpon HOM05D000747 ORTHO05D007656 2.8e-07 58.5 115 36.5
THA.LOC104827502 Tarenaya hassleriana HOM05D000747 ORTHO05D007656 3.7e-07 58.2 114 38.6
Carub.0005s1962 Capsella rubella HOM05D000747 ORTHO05D007656 4.9e-07 57.8 108 38.9
Sp5g09230 Schrenkiella parvula HOM05D000747 ORTHO05D007656 4.9e-07 57.8 108 38.9
BcaB02g08538 Brassica carinata HOM05D000747 ORTHO05D007656 8.3e-07 57.0 101 39.6
BcaC02g09186 Brassica carinata HOM05D000747 ORTHO05D007656 8.3e-07 57.0 101 39.6
C04p39810 Brassica napus HOM05D000747 ORTHO05D007656 8.3e-07 57.0 101 39.6
GSVIVG01033734001 Vitis vinifera HOM05D000747 ORTHO05D007656 8.3e-07 57.0 95 38.9
BolC4t25555H Brassica oleracea HOM05D000747 ORTHO05D007656 1.1e-06 56.6 101 38.6
AT3G53090 Arabidopsis thaliana HOM05D000747 ORTHO05D007656 2.4e-06 55.5 101 39.6
Thhalv10010078m.g Eutrema salsugineum HOM05D000747 ORTHO05D007656 2.4e-06 55.5 101 38.6
Pp3c6_23490 Physcomitrium patens HOM05D000747 ORTHO05D007656 5.4e-06 54.3 115 35.7


User provided reference genes

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