Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 2.8e-213 745.0 371 100.0
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 6.1e-99 365.2 331 58.6
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 1.3e-96 357.5 290 62.1
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 1.7e-96 357.1 276 62.3
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 5.4e-95 352.1 313 58.1
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 1.2e-94 350.9 290 59.3
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 2.0e-94 350.1 378 50.5
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 3.5e-94 349.4 279 61.3
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 1.0e-93 347.8 279 62.7
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 1.3e-93 347.4 277 61.4
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 1.3e-93 347.4 305 58.7
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 1.7e-93 347.1 303 58.7
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 3.0e-93 346.3 295 58.3
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 3.0e-93 346.3 279 62.0
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 3.9e-93 345.9 317 56.8
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 5.0e-93 345.5 276 62.0
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 6.6e-93 345.1 280 61.4
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 8.6e-93 344.7 280 62.5
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 1.1e-92 344.4 305 56.7
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 1.9e-92 343.6 279 62.0
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 3.3e-92 342.8 290 60.7
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 4.3e-92 342.4 291 59.5
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 5.6e-92 342.0 357 53.5
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 7.3e-92 341.7 280 60.7
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 7.3e-92 341.7 378 51.3
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 7.3e-92 341.7 282 59.9
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 1.2e-91 340.9 277 59.6
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 1.6e-91 340.5 279 60.6
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 1.6e-91 340.5 280 59.6
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 2.1e-91 340.1 277 61.4
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 2.1e-91 340.1 284 60.6
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 3.6e-91 339.3 279 59.5
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 4.7e-91 339.0 291 60.1
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 4.7e-91 339.0 255 64.3
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 4.7e-91 339.0 372 48.9
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 6.2e-91 338.6 291 60.5
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 6.2e-91 338.6 305 57.4
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 8.0e-91 338.2 275 58.9
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 1.0e-90 337.8 261 62.5
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 1.0e-90 337.8 277 59.2
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 1.0e-90 337.8 251 64.1
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 1.0e-90 337.8 275 58.9
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 1.4e-90 337.4 279 61.3
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 1.4e-90 337.4 282 60.3
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 1.4e-90 337.4 353 52.4
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 1.8e-90 337.0 311 56.3
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 2.3e-90 336.7 280 60.4
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.3e-90 336.7 277 59.2
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 3.1e-90 336.3 322 56.2
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 3.1e-90 336.3 305 57.0
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 5.2e-90 335.5 275 58.9
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 6.8e-90 335.1 290 58.3
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 1.2e-89 334.3 276 60.5
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 1.5e-89 334.0 361 52.6
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 1.5e-89 334.0 277 58.5
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 1.5e-89 334.0 282 58.2
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 1.5e-89 334.0 276 58.7
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 2.0e-89 333.6 251 62.5
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.6e-89 333.2 277 58.8
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 2.6e-89 333.2 277 62.1
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 3.4e-89 332.8 280 58.9
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 7.5e-89 331.6 290 59.0
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 7.5e-89 331.6 277 58.1
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 9.8e-89 331.3 280 60.4
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 1.7e-88 330.5 278 59.0
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 2.2e-88 330.1 292 58.2
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 4.9e-88 328.9 311 55.6
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 1.1e-87 327.8 266 62.0
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 1.4e-87 327.4 283 58.3
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 1.9e-87 327.0 324 52.5
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 7.0e-87 325.1 258 60.9
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 9.2e-87 324.7 277 59.9
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 1.6e-86 323.9 415 46.7
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 2.0e-86 323.6 276 58.3
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 2.7e-86 323.2 277 57.4
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 4.6e-86 322.4 268 59.3
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 6.0e-86 322.0 281 58.0
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 7.8e-86 321.6 305 55.4
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 1.7e-85 320.5 303 54.8
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 2.3e-85 320.1 278 56.8
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 3.0e-85 319.7 277 57.8
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 5.0e-85 318.9 276 56.9
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 1.1e-84 317.8 306 52.0
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 1.1e-84 317.8 255 62.4
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 1.5e-84 317.4 329 52.9
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 1.9e-84 317.0 283 58.7
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 1.9e-84 317.0 281 58.0
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 3.3e-84 316.2 279 59.1
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 5.6e-84 315.5 277 56.7
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 2.1e-83 313.5 277 58.1
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 2.8e-83 313.2 312 54.5
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 3.6e-83 312.8 282 57.8
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 3.6e-83 312.8 282 57.8
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 4.7e-83 312.4 371 49.9
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 8.1e-83 311.6 278 57.9
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 1.4e-82 310.8 325 53.2
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 2.0e-81 307.0 332 52.4
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 2.0e-81 307.0 275 57.1
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 3.4e-81 306.2 235 63.0
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 7.5e-81 305.1 345 49.3
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 7.5e-81 305.1 371 47.4
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 1.7e-80 303.9 232 63.4
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 1.9e-79 300.4 339 49.3
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 2.4e-79 300.1 369 46.1
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 4.1e-79 299.3 279 55.9
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 1.6e-78 297.4 262 58.0
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 2.7e-78 296.6 271 55.4
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 1.3e-77 294.3 239 61.1
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 1.3e-77 294.3 280 53.6
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 2.3e-77 293.5 208 69.2
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 2.2e-72 276.9 242 56.6
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 6.0e-70 268.9 232 57.8
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 1.4e-66 257.7 237 55.7
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 2.0e-65 253.8 230 54.3
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 1.4e-63 247.7 209 58.9
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 1.5e-60 237.7 195 61.0
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 2.8e-59 233.4 188 60.1
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 1.4e-55 221.1 270 44.4
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 1.2e-49 201.4 298 41.3
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 1.8e-42 177.6 145 57.2
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 1.8e-37 161.0 202 45.5
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 6.3e-35 152.5 132 58.3
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 4.5e-33 146.4 147 52.4
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 9.1e-26 122.1 343 29.2
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 9.4e-15 85.5 48 83.3
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 2.1e-14 84.3 122 44.3
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 7.4e-12 75.9 83 50.6
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 7.0e-10 69.3 43 72.1


User provided reference genes

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