Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.4e-66 256.1 125 100.0
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 4.5e-62 241.1 125 93.6
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.7e-53 212.6 124 79.8
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 2.2e-53 212.2 121 80.2
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 4.7e-51 204.5 122 77.0
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 4.0e-50 201.4 118 78.8
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 5.2e-50 201.1 122 77.0
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 6.7e-50 200.7 122 77.0
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 3.7e-48 194.9 119 76.5
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 5.3e-47 191.0 118 73.7
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 1.0e-45 186.8 123 69.9
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 3.8e-45 184.9 125 68.8
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 4.2e-44 181.4 118 70.3
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 4.2e-44 181.4 118 70.3
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 4.2e-44 181.4 118 70.3
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 7.2e-44 180.6 122 70.5
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.2e-43 179.9 122 68.0
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 1.6e-43 179.5 118 69.5
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 2.7e-43 178.7 118 70.3
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 3.6e-43 178.3 118 69.5
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 8.0e-43 177.2 118 67.8
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 1.0e-42 176.8 118 66.9
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 1.8e-42 176.0 119 65.5
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 2.3e-42 175.6 118 70.3
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 2.3e-42 175.6 116 67.2
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 4.0e-42 174.9 121 66.1
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 5.2e-42 174.5 118 67.8
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 6.8e-42 174.1 118 71.2
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 8.8e-42 173.7 118 69.5
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 1.5e-41 172.9 118 68.6
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 2.0e-41 172.6 122 65.6
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.4e-41 171.8 122 64.8
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 3.4e-41 171.8 118 66.9
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 3.4e-41 171.8 124 60.5
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 4.4e-41 171.4 122 64.8
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.4e-41 171.4 122 63.9
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.4e-41 171.4 122 63.9
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 9.8e-41 170.2 117 68.4
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 9.8e-41 170.2 118 67.8
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.3e-40 169.9 122 63.9
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.3e-40 169.9 118 66.1
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.3e-40 169.9 116 66.4
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 2.2e-40 169.1 117 65.0
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 2.2e-40 169.1 119 66.4
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 2.2e-40 169.1 123 63.4
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 3.7e-40 168.3 120 63.3
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 4.8e-40 167.9 118 61.9
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 4.8e-40 167.9 118 62.7
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 8.3e-40 167.2 118 66.9
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 61.0
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 1.1e-39 166.8 117 64.1
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 1.1e-39 166.8 119 65.5
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 1.4e-39 166.4 118 63.6
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 1.4e-39 166.4 124 62.9
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.1e-39 165.2 119 64.7
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 3.1e-39 165.2 118 67.8
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.1e-39 164.9 119 66.4
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 5.4e-39 164.5 118 63.6
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 7.0e-39 164.1 127 63.8
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 7.0e-39 164.1 135 60.7
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 9.1e-39 163.7 118 64.4
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 9.1e-39 163.7 105 72.4
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 1.6e-38 162.9 118 61.9
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.6e-38 162.9 118 61.0
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.6e-38 162.9 118 61.0
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.6e-38 162.9 118 61.0
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.6e-38 162.9 118 61.0
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.6e-38 162.9 118 61.0
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 2.0e-38 162.5 122 59.8
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 3.5e-38 161.8 118 60.2
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 4.5e-38 161.4 118 60.2
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 5.9e-38 161.0 118 59.3
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 5.9e-38 161.0 118 59.3
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.3e-37 159.8 117 62.4
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 2.9e-37 158.7 116 60.3
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 6.5e-37 157.5 134 61.2
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 8.6e-37 157.1 126 64.3
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 8.6e-37 157.1 119 60.5
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 1.1e-36 156.8 117 59.8
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.5e-36 156.4 118 63.6
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.9e-36 156.0 124 60.5
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.5e-36 155.6 118 63.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 3.3e-36 155.2 101 68.3
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 3.3e-36 155.2 161 49.7
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.2e-36 154.8 105 68.6
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 9.5e-36 153.7 118 60.2
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 1.6e-35 152.9 116 60.3
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 8.9e-34 147.1 108 57.4
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 1.5e-33 146.4 102 61.8
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 1.3e-32 143.3 106 62.3
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.1e-31 140.2 100 66.0
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 7.0e-31 137.5 102 59.8
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 7.0e-31 137.5 126 50.0
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 9.2e-31 137.1 122 52.5
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 5.9e-30 134.4 122 51.6
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.0e-29 133.7 105 55.2
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 1.3e-29 133.3 99 59.6
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.8e-29 131.7 100 63.0
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 5.0e-29 131.3 127 48.0
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.5e-28 129.8 121 52.1
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.5e-28 129.0 121 51.2
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 3.3e-28 128.6 118 57.6
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 3.0e-26 122.1 105 52.4
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 4.4e-25 118.2 93 60.2
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 2.2e-24 115.9 83 63.9
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 3.7e-24 115.2 90 58.9
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 8.3e-24 114.0 84 65.5
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 7.0e-23 110.9 86 61.6
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.2e-22 110.2 79 58.2
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 5.6e-20 101.3 132 40.2
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.3e-18 95.9 63 63.5
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.5e-17 93.2 66 57.6
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 7.0e-15 84.3 123 43.1
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.8e-11 72.4 58 60.3
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 2.3e-10 69.3 119 35.3
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.4e-09 65.5 45 62.2
Nn1g09285 Nelumbo nucifera HOM05D006897 ORTHO05D008825 3.4e-09 65.5 33 87.9
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 3.4e-09 65.5 43 67.4
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 9.9e-09 63.9 39 71.8
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 6.4e-08 61.2 41 63.4


User provided reference genes

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