Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4568 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 2.2e-76 288.9 146 100.0
CDE04G3706 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 8.7e-73 276.9 146 95.9
Aqoxy7G01609 Aquilegia oxysepala HOM05D003870 ORTHO05D004567 9.9e-61 236.9 146 81.5
Dinv38024 Davidia involucrata HOM05D003870 ORTHO05D004567 6.4e-60 234.2 146 79.5
Nn2g11696 Nelumbo nucifera HOM05D003870 ORTHO05D004567 8.4e-60 233.8 146 79.5
Nn3g18073 Nelumbo nucifera HOM05D003870 ORTHO05D004567 5.4e-59 231.1 147 78.9
Glyma.07G019700 Glycine max HOM05D003870 ORTHO05D004567 9.3e-59 230.3 146 78.1
Medtr2g101820 Medicago truncatula HOM05D003870 ORTHO05D004567 9.3e-59 230.3 148 77.0
TAR626G1423 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 78.8
TAR383G0495 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.6e-58 229.6 146 78.8
Glyma.08G204800 Glycine max HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 77.4
Potri.003G052500 Populus trichocarpa HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 78.1
Manes.11G038100 Manihot esculenta HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 77.4
VMungo0331G0764 Vigna mungo HOM05D003870 ORTHO05D004567 3.5e-58 228.4 146 77.4
MBI01_g07179_MAGBIO Magnolia biondii HOM05D003870 ORTHO05D004567 4.6e-58 228.0 146 77.4
Manes.04G129900 Manihot esculenta HOM05D003870 ORTHO05D004567 4.6e-58 228.0 146 77.4
Psat5g298080 Pisum sativum HOM05D003870 ORTHO05D004567 4.6e-58 228.0 147 76.2
Phvul.010G148800 Phaseolus vulgaris HOM05D003870 ORTHO05D004567 1.0e-57 226.9 146 77.4
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea HOM05D003870 ORTHO05D004567 1.3e-57 226.5 146 77.4
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea HOM05D003870 ORTHO05D004567 1.3e-57 226.5 146 77.4
Cfa002093 Carpinus fangiana HOM05D003870 ORTHO05D004567 1.3e-57 226.5 146 77.4
Haze_16364 Corylus avellana HOM05D003870 ORTHO05D004567 1.3e-57 226.5 146 77.4
Ciclev10026722m.g Citrus clementina HOM05D003870 ORTHO05D004567 3.0e-57 225.3 146 76.7
ECA234G4669 Erigeron canadensis HOM05D003870 ORTHO05D004567 6.7e-57 224.2 146 74.0
PSO832G3918 Papaver somniferum HOM05D003870 ORTHO05D004567 8.7e-57 223.8 147 77.6
Sabra03G0026800 Salix brachista HOM05D003870 ORTHO05D004567 8.7e-57 223.8 146 76.7
TAR636G2531 Trochodendron aralioides HOM05D003870 ORTHO05D004567 8.7e-57 223.8 146 76.7
PSO782G2129 Papaver somniferum HOM05D003870 ORTHO05D004567 1.1e-56 223.4 147 77.6
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 1.5e-56 223.0 147 77.6
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 1.5e-56 223.0 147 77.6
Lsat_1_v5_gn_5_130901 Lactuca sativa HOM05D003870 ORTHO05D004567 1.5e-56 223.0 146 74.7
CiPaw.01G235900 Carya illinoinensis HOM05D003870 ORTHO05D004567 1.9e-56 222.6 146 75.3
Eucgr.F03038 Eucalyptus grandis HOM05D003870 ORTHO05D004567 1.9e-56 222.6 146 74.0
QL05p021780 Quercus lobata HOM05D003870 ORTHO05D004567 1.9e-56 222.6 145 74.5
Migut.D01017 Erythranthe guttata HOM05D003870 ORTHO05D004567 2.5e-56 222.2 146 76.0
Nitab4.5_0001315g0130 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.5e-56 222.2 146 76.0
Solyc03g120640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 3.3e-56 221.9 146 76.0
Nitab4.5_0000351g0060 Nicotiana tabacum HOM05D003870 ORTHO05D004567 4.3e-56 221.5 146 76.0
PGSC0003DMG400002626 Solanum tuberosum HOM05D003870 ORTHO05D004567 4.3e-56 221.5 146 76.0
PGR102G1204 Punica granatum HOM05D003870 ORTHO05D004567 7.4e-56 220.7 146 75.3
CANSAT56G1465 Cannabis sativa HOM05D003870 ORTHO05D004567 9.6e-56 220.3 146 75.3
CAN.G1152.5 Capsicum annuum HOM05D003870 ORTHO05D004567 9.6e-56 220.3 146 76.0
Nitab4.5_0002859g0140 Nicotiana tabacum HOM05D003870 ORTHO05D004567 9.6e-56 220.3 146 75.3
HanXRQChr12g0360771 Helianthus annuus HOM05D003870 ORTHO05D004567 1.6e-55 219.5 146 73.3
Lj3g0012525 Lotus japonicus HOM05D003870 ORTHO05D004567 1.6e-55 219.5 150 74.7
Nitab4.5_0003418g0030 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.6e-55 219.5 146 75.3
Glyma.15G016300 Glycine max HOM05D003870 ORTHO05D004567 2.1e-55 219.2 146 76.7
Nitab4.5_0018837g0020 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.1e-55 219.2 146 76.0
Migut.I00942 Erythranthe guttata HOM05D003870 ORTHO05D004567 2.8e-55 218.8 146 74.0
Solyc06g066640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 3.7e-55 218.4 147 76.2
BcaB04g18888 Brassica carinata HOM05D003870 ORTHO05D004567 4.8e-55 218.0 146 70.5
Sopen06g024910 Solanum pennellii HOM05D003870 ORTHO05D004567 4.8e-55 218.0 147 76.2
PGSC0003DMG400016504 Solanum tuberosum HOM05D003870 ORTHO05D004567 4.8e-55 218.0 146 74.7
CiPaw.02G148900 Carya illinoinensis HOM05D003870 ORTHO05D004567 6.2e-55 217.6 146 74.7
Lsat_1_v5_gn_1_35241 Lactuca sativa HOM05D003870 ORTHO05D004567 6.2e-55 217.6 142 73.9
Peaxi162Scf00015g00032 Petunia axillaris HOM05D003870 ORTHO05D004567 8.1e-55 217.2 146 74.7
Prupe.3G067400 Prunus persica HOM05D003870 ORTHO05D004567 1.1e-54 216.9 146 74.0
ClCG07G013150 Citrullus lanatus HOM05D003870 ORTHO05D004567 1.4e-54 216.5 146 71.9
MD09G1209500 Malus domestica HOM05D003870 ORTHO05D004567 1.4e-54 216.5 146 71.9
VMungo1080G1700 Vigna mungo HOM05D003870 ORTHO05D004567 1.4e-54 216.5 139 77.0
Lalb_Chr25g0279971 Lupinus albus HOM05D003870 ORTHO05D004567 1.8e-54 216.1 147 72.8
RcHm_v2.0_Chr2g0138931 Rosa chinensis HOM05D003870 ORTHO05D004567 1.8e-54 216.1 146 72.6
GSVIVG01017071001 Vitis vinifera HOM05D003870 ORTHO05D004567 1.8e-54 216.1 146 74.7
BcaB06g25707 Brassica carinata HOM05D003870 ORTHO05D004567 2.4e-54 215.7 147 72.1
CAN.G438.27 Capsicum annuum HOM05D003870 ORTHO05D004567 2.4e-54 215.7 146 74.7
FAN05G2130 Fragaria x ananassa HOM05D003870 ORTHO05D004567 2.4e-54 215.7 146 72.6
A05p33360 Brassica napus HOM05D003870 ORTHO05D004567 3.1e-54 215.3 146 69.9
BraA05t22161Z Brassica rapa HOM05D003870 ORTHO05D004567 3.1e-54 215.3 146 69.9
CSS0035581 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 3.1e-54 215.3 146 73.3
AUR62011659 Chenopodium quinoa HOM05D003870 ORTHO05D004567 3.1e-54 215.3 146 72.6
CsaV3_3G025000 Cucumis sativus L. HOM05D003870 ORTHO05D004567 3.1e-54 215.3 146 72.6
FAN14G2389 Fragaria x ananassa HOM05D003870 ORTHO05D004567 3.1e-54 215.3 146 72.6
BcaC05g28907 Brassica carinata HOM05D003870 ORTHO05D004567 4.0e-54 214.9 146 69.9
C05p50360 Brassica napus HOM05D003870 ORTHO05D004567 4.0e-54 214.9 146 69.9
BolC5t33784H Brassica oleracea HOM05D003870 ORTHO05D004567 4.0e-54 214.9 146 69.9
FAN09G1730 Fragaria x ananassa HOM05D003870 ORTHO05D004567 4.0e-54 214.9 146 72.6
Solyc12g044280.2 Solanum lycopersicum HOM05D003870 ORTHO05D004567 4.0e-54 214.9 146 76.7
Sopen12g022520 Solanum pennellii HOM05D003870 ORTHO05D004567 4.0e-54 214.9 146 76.7
FAN02G0928 Fragaria x ananassa HOM05D003870 ORTHO05D004567 5.3e-54 214.5 146 72.6
Sed0024359 Sechium edule HOM05D003870 ORTHO05D004567 5.3e-54 214.5 146 71.9
Zm00001eb295610 Zea mays HOM05D003870 ORTHO05D004567 6.9e-54 214.2 143 76.9
Ah.01g021620 Amaranthus hybridus HOM05D003870 ORTHO05D004567 9.0e-54 213.8 146 72.6
CSS0004601 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 9.0e-54 213.8 146 71.9
CSS0022866 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 9.0e-54 213.8 146 71.9
DCAR_023061 Daucus carota HOM05D003870 ORTHO05D004567 1.2e-53 213.4 146 71.9
Thhalv10021715m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 1.2e-53 213.4 146 69.9
Sp3g14500 Schrenkiella parvula HOM05D003870 ORTHO05D004567 1.2e-53 213.4 146 69.9
MELO3C012971.2 Cucumis melo HOM05D003870 ORTHO05D004567 1.5e-53 213.0 146 71.2
Lalb_Chr14g0373231 Lupinus albus HOM05D003870 ORTHO05D004567 2.0e-53 212.6 147 74.8
Sed0005638 Sechium edule HOM05D003870 ORTHO05D004567 2.0e-53 212.6 146 71.2
FvH4_6g31740 Fragaria vesca HOM05D003870 ORTHO05D004567 2.6e-53 212.2 146 71.9
AT3G16140 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 3.4e-53 211.8 146 68.5
CARHR091300 Cardamine hirsuta HOM05D003870 ORTHO05D004567 5.8e-53 211.1 146 68.5
Duzib235G0817 Durio zibethinus HOM05D003870 ORTHO05D004567 7.6e-53 210.7 146 71.9
PGSC0003DMG400007571 Solanum tuberosum HOM05D003870 ORTHO05D004567 7.6e-53 210.7 147 76.2
BraA01t03856Z Brassica rapa HOM05D003870 ORTHO05D004567 9.9e-53 210.3 146 68.5
SGA_v2.0_scaffold5G02558 Striga asiatica HOM05D003870 ORTHO05D004567 9.9e-53 210.3 146 71.9
ATR0315G019 Amborella trichopoda HOM05D003870 ORTHO05D004567 1.3e-52 209.9 142 72.5
Cpa.g.sc1182.1 Carica papaya HOM05D003870 ORTHO05D004567 1.3e-52 209.9 146 70.5
Oeu029644.1 Olea europaea HOM05D003870 ORTHO05D004567 1.3e-52 209.9 146 71.9
AT1G52230 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 1.7e-52 209.5 146 67.8
Thhalv10011814m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 1.7e-52 209.5 146 69.2
MSTRG.11054 Avicennia marina HOM05D003870 ORTHO05D004567 2.2e-52 209.1 146 69.9
Gohir.D05G131200 Gossypium hirsutum HOM05D003870 ORTHO05D004567 2.2e-52 209.1 146 71.9
Gorai.009G134900 Gossypium raimondii HOM05D003870 ORTHO05D004567 2.2e-52 209.1 146 71.9
BraA08t32272Z Brassica rapa HOM05D003870 ORTHO05D004567 2.9e-52 208.8 146 68.5
Eucgr.J02958 Eucalyptus grandis HOM05D003870 ORTHO05D004567 2.9e-52 208.8 147 72.8
Actinidia21679 Actinidia chinensis HOM05D003870 ORTHO05D004567 3.8e-52 208.4 146 71.2
THA.LOC104817982 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 3.8e-52 208.4 146 69.9
Thecc.06G092200 Theobroma cacao HOM05D003870 ORTHO05D004567 3.8e-52 208.4 146 71.9
TWI12G1021 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 3.8e-52 208.4 146 69.2
AL3G28820 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 4.9e-52 208.0 146 67.8
A08p02270 Brassica napus HOM05D003870 ORTHO05D004567 4.9e-52 208.0 146 68.5
C06p07460 Brassica napus HOM05D003870 ORTHO05D004567 4.9e-52 208.0 146 67.8
BolC6t35835H Brassica oleracea HOM05D003870 ORTHO05D004567 4.9e-52 208.0 146 67.8
Oeu024071.1 Olea europaea HOM05D003870 ORTHO05D004567 4.9e-52 208.0 136 73.5
Aa31LG10G2680 Aethionema arabicum HOM05D003870 ORTHO05D004567 6.4e-52 207.6 146 67.8
A01p37960 Brassica napus HOM05D003870 ORTHO05D004567 6.4e-52 207.6 146 67.8
Gohir.A05G131700 Gossypium hirsutum HOM05D003870 ORTHO05D004567 6.4e-52 207.6 146 71.9
Sp1g38770 Schrenkiella parvula HOM05D003870 ORTHO05D004567 6.4e-52 207.6 146 67.1
EL10Ac9g22029 Beta vulgaris HOM05D003870 ORTHO05D004567 8.4e-52 207.2 146 69.9
vmacro18888 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 8.4e-52 207.2 147 70.1
BcaC01g01311 Brassica carinata HOM05D003870 ORTHO05D004567 1.1e-51 206.8 146 67.8
BcaC01g01313 Brassica carinata HOM05D003870 ORTHO05D004567 1.1e-51 206.8 146 67.8
A06p01960 Brassica napus HOM05D003870 ORTHO05D004567 1.1e-51 206.8 146 67.8
BraA06t23412Z Brassica rapa HOM05D003870 ORTHO05D004567 1.1e-51 206.8 146 67.8
Rhsim08G0223300 Rhododendron simsii HOM05D003870 ORTHO05D004567 1.1e-51 206.8 147 70.1
Carub.0003s1588 Capsella rubella HOM05D003870 ORTHO05D004567 1.4e-51 206.5 146 67.1
SGA_v2.0_scaffold69G23361 Striga asiatica HOM05D003870 ORTHO05D004567 1.4e-51 206.5 147 71.4
C03p90500 Brassica napus HOM05D003870 ORTHO05D004567 1.9e-51 206.1 146 67.8
BolC3t21374H Brassica oleracea HOM05D003870 ORTHO05D004567 1.9e-51 206.1 146 67.8
Os05g0560000 Oryza sativa ssp. japonica HOM05D003870 ORTHO05D004567 1.9e-51 206.1 139 74.8
Carub.0001s4120 Capsella rubella HOM05D003870 ORTHO05D004567 3.2e-51 205.3 146 67.1
THA.LOC104810527 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 3.2e-51 205.3 147 68.7
unitig_0.g2124 Utricularia gibba HOM05D003870 ORTHO05D004567 4.2e-51 204.9 146 71.2
Cc04_g03050 Coffea canephora HOM05D003870 ORTHO05D004567 5.5e-51 204.5 146 71.9
TWI75G1362 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 7.1e-51 204.1 147 68.7
COL.COLO4_30434 Corchorus olitorius HOM05D003870 ORTHO05D004567 9.3e-51 203.8 146 69.9
Duzib160G0587 Durio zibethinus HOM05D003870 ORTHO05D004567 1.6e-50 203.0 146 69.9
Glyma.13G357300 Glycine max HOM05D003870 ORTHO05D004567 2.7e-50 202.2 138 74.6
Peaxi162Scf00034g00513 Petunia axillaris HOM05D003870 ORTHO05D004567 3.5e-50 201.8 143 71.3
CARHR042360 Cardamine hirsuta HOM05D003870 ORTHO05D004567 4.6e-50 201.4 146 65.8
vmacro16969 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 6.0e-50 201.1 146 68.5
Sc15g0001350 Simmondsia chinensis HOM05D003870 ORTHO05D004567 1.0e-49 200.3 131 74.8
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 1.8e-49 199.5 147 65.3
Hund00643 Selenicereus undatus HOM05D003870 ORTHO05D004567 2.3e-49 199.1 147 69.4
Rhsim12G0200100 Rhododendron simsii HOM05D003870 ORTHO05D004567 8.7e-49 197.2 146 68.5
Actinidia32731 Actinidia chinensis HOM05D003870 ORTHO05D004567 7.4e-48 194.1 130 73.8
Nitab4.5_0001968g0090 Nicotiana tabacum HOM05D003870 ORTHO05D004567 9.6e-48 193.7 146 69.9
Sopen00g011820 Solanum pennellii HOM05D003870 ORTHO05D004567 1.8e-46 189.5 103 87.4
AUR62016482 Chenopodium quinoa HOM05D003870 ORTHO05D004567 1.3e-44 183.3 146 65.8
AL1G60400 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 4.9e-44 181.4 103 79.6
SEGI_14279 Sequoiadendron giganteum HOM05D003870 ORTHO05D004567 1.1e-43 180.3 148 64.2
TPR.G37200 Trifolium pratense HOM05D003870 ORTHO05D004567 7.1e-43 177.6 147 63.9
BcaC08g43379 Brassica carinata HOM05D003870 ORTHO05D004567 2.7e-42 175.6 102 78.4
HPP92_021482 Vanilla planifolia HOM05D003870 ORTHO05D004567 4.5e-37 158.3 121 66.1
Pp3c15_19390 Physcomitrium patens HOM05D003870 ORTHO05D004567 1.7e-36 156.4 131 55.7
Pp3c9_19520 Physcomitrium patens HOM05D003870 ORTHO05D004567 8.5e-36 154.1 131 55.7
CBR_g31512 Chara braunii HOM05D003870 ORTHO05D004567 9.7e-32 140.6 125 57.6
Mapoly0009s0008 Marchantia polymorpha HOM05D003870 ORTHO05D004567 4.8e-31 138.3 150 54.0
Duzib192G0641 Durio zibethinus HOM05D003870 ORTHO05D004567 1.3e-28 130.2 99 65.7
Peaxi162Scf00207g00951 Petunia axillaris HOM05D003870 ORTHO05D004567 5.5e-27 124.8 146 55.5
BolC1t04783H Brassica oleracea HOM05D003870 ORTHO05D004567 1.6e-26 123.2 146 50.0
C01p48190 Brassica napus HOM05D003870 ORTHO05D004567 4.7e-26 121.7 146 49.3
Dinv30483 Davidia involucrata HOM05D003870 ORTHO05D004567 6.1e-26 121.3 86 68.6
MD17G1191200 Malus domestica HOM05D003870 ORTHO05D004567 2.0e-24 116.3 86 64.0
HanXRQChr10g0313451 Helianthus annuus HOM05D003870 ORTHO05D004567 4.8e-23 111.7 82 62.2
ECA247G2331 Erigeron canadensis HOM05D003870 ORTHO05D004567 1.5e-21 106.7 72 65.3
MD17G1191400 Malus domestica HOM05D003870 ORTHO05D004567 2.6e-21 105.9 60 86.7
MCO07G351 Micromonas commoda HOM05D003870 ORTHO05D004567 8.0e-18 94.4 126 42.1
MD10G1187500 Malus domestica HOM05D003870 ORTHO05D004567 2.4e-14 82.8 71 54.9
MD14G1193300 Malus domestica HOM05D003870 ORTHO05D004567 3.8e-12 75.5 71 56.3
Cre07.g330250 Chlamydomonas reinhardtii HOM05D003870 ORTHO05D004567 8.5e-12 74.3 109 39.4
unitig_747.g21485 Utricularia gibba HOM05D003870 ORTHO05D004567 3.2e-11 72.4 143 37.8
Zm00001eb343540 Zea mays HOM05D003870 ORTHO05D004567 7.2e-11 71.2 131 41.2
MD02G1178900 Malus domestica HOM05D003870 ORTHO05D004567 2.8e-07 59.3 33 75.8


User provided reference genes

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