Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4564 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 5.2e-276 953.7 479 100.0
CDE08G0765 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 7.4e-214 747.3 557 72.7
MBI03_g35292_MAGBIO Magnolia biondii HOM05D005364 ORTHO05D006554 5.4e-172 608.2 555 56.9
TAR628G1468 Trochodendron aralioides HOM05D005364 ORTHO05D006554 1.6e-171 606.7 563 56.8
Nn5g28547 Nelumbo nucifera HOM05D005364 ORTHO05D006554 1.6e-168 596.7 570 56.1
Cfa018384 Carpinus fangiana HOM05D005364 ORTHO05D006554 1.4e-167 593.6 567 55.7
Haze_17688 Corylus avellana HOM05D005364 ORTHO05D006554 1.9e-164 583.2 589 53.8
Thecc.08G141100 Theobroma cacao HOM05D005364 ORTHO05D006554 9.2e-164 580.9 563 55.6
Atru.chr13.1665 Acer truncatum HOM05D005364 ORTHO05D006554 2.7e-163 579.3 560 55.5
Hma1.2p1_0107F.1_g051330 Hydrangea macrophylla HOM05D005364 ORTHO05D006554 2.7e-163 579.3 561 55.8
GSVIVG01010009001 Vitis vinifera HOM05D005364 ORTHO05D006554 7.8e-163 577.8 567 54.5
Aqoxy6G00357 Aquilegia oxysepala HOM05D005364 ORTHO05D006554 1.0e-162 577.4 569 54.7
Gorai.005G083600 Gossypium raimondii HOM05D005364 ORTHO05D006554 1.0e-162 577.4 553 55.5
Manes.18G085705 Manihot esculenta HOM05D005364 ORTHO05D006554 1.3e-162 577.0 562 55.2
CiPaw.15G022800 Carya illinoinensis HOM05D005364 ORTHO05D006554 3.9e-162 575.5 563 54.7
Sabra05G0142500 Salix brachista HOM05D005364 ORTHO05D006554 5.0e-162 575.1 538 55.9
Dinv25792 Davidia involucrata HOM05D005364 ORTHO05D006554 8.6e-162 574.3 549 55.9
Gohir.D02G074200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 8.6e-162 574.3 553 55.2
Potri.005G186600 Populus trichocarpa HOM05D005364 ORTHO05D006554 8.6e-162 574.3 570 54.4
Duzib041G0781 Durio zibethinus HOM05D005364 ORTHO05D006554 3.3e-161 572.4 553 54.8
TWI34G0076 Tripterygium wilfordii HOM05D005364 ORTHO05D006554 8.1e-160 567.8 559 54.6
Prupe.8G016300 Prunus persica HOM05D005364 ORTHO05D006554 1.4e-159 567.0 554 54.5
ATR0138G016 Amborella trichopoda HOM05D005364 ORTHO05D006554 9.8e-158 560.8 543 54.0
Glyma.14G119200 Glycine max HOM05D005364 ORTHO05D006554 2.9e-157 559.3 560 52.0
Sed0004836 Sechium edule HOM05D005364 ORTHO05D006554 1.4e-156 557.0 548 54.6
CSS0030633 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 2.4e-156 556.2 563 52.2
Lalb_Chr25g0281671 Lupinus albus HOM05D005364 ORTHO05D006554 4.6e-155 552.0 557 51.9
Lj1g0018455 Lotus japonicus HOM05D005364 ORTHO05D006554 6.0e-155 551.6 567 51.9
Eucgr.F02755 Eucalyptus grandis HOM05D005364 ORTHO05D006554 1.7e-154 550.1 555 51.9
MSTRG.1383 Avicennia marina HOM05D005364 ORTHO05D006554 3.9e-154 548.9 562 52.7
Actinidia03441 Actinidia chinensis HOM05D005364 ORTHO05D006554 6.6e-154 548.1 565 51.0
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 6.6e-154 548.1 562 52.8
CANSAT25G0570 Cannabis sativa HOM05D005364 ORTHO05D006554 1.1e-153 547.4 555 52.4
QL09p029051 Quercus lobata HOM05D005364 ORTHO05D006554 1.5e-153 547.0 637 49.0
Sc15g0007440 Simmondsia chinensis HOM05D001552 ORTHO05D003294 2.5e-153 546.2 556 52.7
Phvul.001G064400 Phaseolus vulgaris HOM05D005364 ORTHO05D006554 3.3e-153 545.8 548 52.0
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 5.6e-153 545.0 559 52.4
MD05G1011300 Malus domestica HOM05D005364 ORTHO05D006554 5.6e-153 545.0 554 52.7
SGA_v2.0_scaffold24G10388 Striga asiatica HOM05D005364 ORTHO05D006554 2.8e-152 542.7 556 52.3
Psat6g039520 Pisum sativum HOM05D005364 ORTHO05D006554 3.6e-152 542.3 560 50.9
MELO3C010582.2 Cucumis melo HOM05D005364 ORTHO05D006554 1.4e-151 540.4 565 52.0
Migut.C01101 Erythranthe guttata HOM05D005364 ORTHO05D006554 6.8e-151 538.1 564 52.1
CsaV3_6G035590 Cucumis sativus L. HOM05D005364 ORTHO05D006554 1.2e-150 537.3 565 51.5
CAN.G657.4 Capsicum annuum HOM05D005364 ORTHO05D006554 3.4e-150 535.8 563 50.3
HanXRQChr15g0484621 Helianthus annuus HOM05D005364 ORTHO05D006554 4.4e-150 535.4 549 51.0
MD10G1011100 Malus domestica HOM05D005364 ORTHO05D006554 9.9e-150 534.3 554 52.0
Ciclev10000720m.g Citrus clementina HOM05D005364 ORTHO05D006554 2.2e-149 533.1 548 52.2
Peaxi162Scf00066g01936 Petunia axillaris HOM05D005364 ORTHO05D006554 2.2e-149 533.1 568 50.2
Cc10_g13140 Coffea canephora HOM05D005364 ORTHO05D006554 2.9e-149 532.7 566 50.5
PGR142G4297 Punica granatum HOM05D005364 ORTHO05D006554 1.1e-148 530.8 567 51.5
PSO541G2378 Papaver somniferum HOM05D005364 ORTHO05D006554 1.4e-148 530.4 552 51.8
Lalb_Chr06g0173651 Lupinus albus HOM05D005364 ORTHO05D006554 1.9e-148 530.0 563 51.2
Lsat_1_v5_gn_9_124401 Lactuca sativa HOM05D005364 ORTHO05D006554 4.1e-148 528.9 552 51.3
Ah.05g169340 Amaranthus hybridus HOM05D005364 ORTHO05D006554 9.2e-148 527.7 564 52.5
SalBow7G3071 Salvia bowleyana HOM05D005364 ORTHO05D006554 1.6e-147 526.9 571 51.1
Solyc04g064560.4 Solanum lycopersicum HOM05D005364 ORTHO05D006554 3.5e-147 525.8 555 51.0
Sopen04g026510 Solanum pennellii HOM05D005364 ORTHO05D006554 6.0e-147 525.0 561 50.4
RcHm_v2.0_Chr6g0277571 Rosa chinensis HOM05D005364 ORTHO05D006554 1.3e-146 523.9 556 50.5
PSO675G4293 Papaver somniferum HOM05D005364 ORTHO05D006554 3.0e-146 522.7 552 51.3
AT5G25800 Arabidopsis thaliana HOM05D005364 ORTHO05D006554 8.6e-146 521.2 557 52.1
COL.COLO4_33812 Corchorus olitorius HOM05D005364 ORTHO05D006554 1.5e-145 520.4 521 52.4
Thhalv10003904m.g Eutrema salsugineum HOM05D005364 ORTHO05D006554 4.3e-145 518.8 558 51.1
Gohir.A02G068200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 1.6e-144 516.9 503 55.3
Medtr1g029410 Medicago truncatula HOM05D005364 ORTHO05D006554 1.6e-144 516.9 562 50.2
AL6G37660 Arabidopsis lyrata HOM05D005364 ORTHO05D006554 2.1e-144 516.5 559 51.3
THA.LOC104798861 Tarenaya hassleriana HOM05D005364 ORTHO05D006554 2.8e-144 516.2 559 50.4
Carub.0006s2357 Capsella rubella HOM05D005364 ORTHO05D006554 6.2e-144 515.0 558 51.3
A02p39590 Brassica napus HOM05D005364 ORTHO05D006554 8.1e-144 514.6 552 50.7
AUR62013475 Chenopodium quinoa HOM05D005364 ORTHO05D006554 1.1e-143 514.2 536 50.9
Nitab4.5_0000174g0280 Nicotiana tabacum HOM05D005364 ORTHO05D006554 1.4e-143 513.8 564 49.8
BcaB07g29980 Brassica carinata HOM05D005364 ORTHO05D006554 8.9e-143 511.1 560 50.4
Sp2g21830 Schrenkiella parvula HOM05D005364 ORTHO05D006554 1.5e-142 510.4 559 51.2
C02p59350 Brassica napus HOM05D005364 ORTHO05D006554 2.2e-141 506.5 555 50.3
Aa31LG11G4810 Aethionema arabicum HOM05D005364 ORTHO05D006554 2.9e-141 506.1 556 50.4
BraA02t08927Z Brassica rapa HOM05D005364 ORTHO05D006554 1.1e-140 504.2 553 50.1
BcaC03g17892 Brassica carinata HOM05D005364 ORTHO05D006554 1.9e-140 503.4 555 49.9
BraA06t26562Z Brassica rapa HOM05D005364 ORTHO05D006554 1.9e-140 503.4 560 50.5
BcaNung04840 Brassica carinata HOM05D005364 ORTHO05D006554 1.2e-139 500.7 565 49.7
ECA232G1379 Erigeron canadensis HOM05D005364 ORTHO05D006554 1.2e-139 500.7 555 46.7
Rhsim11G0077000 Rhododendron simsii HOM05D005364 ORTHO05D006554 3.5e-139 499.2 648 44.8
CARHR187620 Cardamine hirsuta HOM05D005364 ORTHO05D006554 6.0e-139 498.4 558 50.0
Nitab4.5_0007147g0010 Nicotiana tabacum HOM05D005364 ORTHO05D006554 1.0e-138 497.7 529 51.8
ClCG08G002730 Citrullus lanatus HOM05D005364 ORTHO05D006554 2.3e-138 496.5 520 51.5
FAN24G1520 Fragaria x ananassa HOM05D005364 ORTHO05D006554 2.3e-138 496.5 559 48.7
FAN15G1836 Fragaria x ananassa HOM05D005364 ORTHO05D006554 3.9e-138 495.7 556 48.4
BolC2t11997H Brassica oleracea HOM05D005364 ORTHO05D006554 5.1e-138 495.4 557 49.6
FAN27G1309 Fragaria x ananassa HOM05D005364 ORTHO05D006554 8.7e-138 494.6 557 48.3
A06p36390 Brassica napus HOM05D005364 ORTHO05D006554 1.5e-137 493.8 564 50.2
Glyma.13G037300 Glycine max HOM05D005364 ORTHO05D006554 3.3e-137 492.7 507 51.9
C07p42120 Brassica napus HOM05D005364 ORTHO05D006554 4.8e-136 488.8 564 49.6
FvH4_2g15020 Fragaria vesca HOM05D005364 ORTHO05D006554 2.4e-135 486.5 554 48.4
BcaNung03925 Brassica carinata HOM05D005364 ORTHO05D006554 4.0e-135 485.7 564 49.5
Lj4C689G10 Lonicera japonica HOM05D005364 ORTHO05D006554 5.3e-135 485.3 565 48.7
Zm00001eb409200 Zea mays HOM05D005364 ORTHO05D006554 6.9e-135 485.0 556 47.8
BolC7t44743H Brassica oleracea HOM05D005364 ORTHO05D006554 9.0e-135 484.6 563 49.2
arahy.Tifrunner.gnm1.ann1.3V9M2M Arachis hypogaea HOM05D005364 ORTHO05D006554 3.4e-134 482.6 541 49.0
Ca_12657_v3 Cicer arietinum L. HOM05D005364 ORTHO05D003291 3.8e-133 479.2 519 49.1
Oeu001555.1 Olea europaea HOM05D005364 ORTHO05D006554 6.6e-130 468.4 506 51.0
DCAR_010238 Daucus carota HOM05D005364 ORTHO05D006554 8.1e-120 434.9 563 44.4
Zm00001eb138630 Zea mays HOM05D005364 ORTHO05D006554 7.6e-118 428.3 511 47.6
Sc15g0007420 Simmondsia chinensis HOM05D005364 ORTHO05D006554 6.9e-111 405.2 449 49.9
vmacro00886 Vaccinium macrocarpon HOM05D005364 ORTHO05D006554 2.5e-97 360.1 958 29.3
EL10Ac1g01440 Beta vulgaris HOM05D005364 ORTHO05D006554 7.4e-97 358.6 470 44.5
HPP92_021466 Vanilla planifolia HOM05D005364 ORTHO05D006554 7.7e-94 348.6 519 41.2
Os12g0188900 Oryza sativa ssp. japonica HOM05D005364 ORTHO05D006554 5.0e-93 345.9 390 49.5
VMungo0647G2252 Vigna mungo HOM05D005364 ORTHO05D006554 1.3e-85 321.2 365 48.8
Pp3c1_5030 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.7e-80 304.3 600 33.5
AUR62026796 Chenopodium quinoa HOM05D005364 ORTHO05D006554 5.3e-79 299.3 359 46.5
Mapoly0062s0092 Marchantia polymorpha HOM05D005364 ORTHO05D006554 4.5e-78 296.2 614 34.2
TPR.G33326 Trifolium pratense HOM05D005364 ORTHO05D006554 5.0e-77 292.7 249 59.0
FAN20G2210 Fragaria x ananassa HOM05D005364 ORTHO05D006554 3.6e-75 286.6 270 54.1
TPR.G33301 Trifolium pratense HOM05D005364 ORTHO05D006554 9.8e-73 278.5 232 59.9
HPP92_019395 Vanilla planifolia HOM05D005364 ORTHO05D006554 4.1e-71 273.1 253 55.3
Pp3c7_16700 Physcomitrium patens HOM05D005364 ORTHO05D006554 3.5e-70 270.0 514 36.4
Cpa.g.sc26.95 Carica papaya HOM05D005364 ORTHO05D006554 5.5e-68 262.7 212 62.3
HPP92_019394 Vanilla planifolia HOM05D005364 ORTHO05D006554 5.5e-68 262.7 219 60.3
arahy.Tifrunner.gnm1.ann1.M37XHZ Arachis hypogaea HOM05D005364 ORTHO05D006554 1.4e-66 258.1 264 52.7
DCAR_001120 Daucus carota HOM05D005364 ORTHO05D006554 2.3e-66 257.3 235 54.9
HPP92_019392 Vanilla planifolia HOM05D005364 ORTHO05D006554 6.8e-66 255.8 231 55.8
AagrBONN_evm.TU.Sc2ySwM_344.2478 Anthoceros agrestis HOM05D005364 ORTHO05D006554 2.0e-65 254.2 445 37.3
Hund26737 Selenicereus undatus HOM05D008449 ORTHO05D010615 5.7e-65 252.7 271 52.4
CBR_g39514 Chara braunii HOM05D005364 ORTHO05D006554 1.2e-62 245.0 569 30.4
AUR62026797 Chenopodium quinoa HOM05D005364 ORTHO05D006554 3.5e-62 243.4 208 58.7
Potri.002G073300 Populus trichocarpa HOM05D005364 ORTHO05D006554 1.6e-59 234.6 209 56.5
Dinv41139 Davidia involucrata HOM05D005364 ORTHO05D006554 1.5e-57 228.0 187 58.8
Hund17384 Selenicereus undatus HOM05D005364 ORTHO05D006554 3.2e-55 220.3 206 58.3
DCAR_001119 Daucus carota HOM05D005364 ORTHO05D006554 5.4e-55 219.5 205 55.6
Dinv41138 Davidia involucrata HOM05D005364 ORTHO05D006554 1.1e-47 195.3 242 49.2
VMungo0647G0736 Vigna mungo HOM05D005364 ORTHO05D006554 1.2e-43 181.8 179 52.5
SEGI_18953 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 5.8e-33 146.4 164 43.9
SEGI_12292 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 2.4e-31 141.0 125 56.0
HanXRQChr16g0503811 Helianthus annuus HOM05D005364 ORTHO05D006554 6.0e-30 136.3 92 63.0
PRCOL_00002441 Prasinoderma coloniale HOM05D005364 ORTHO05D006554 1.7e-29 134.8 579 23.3
Pp3c7_4920 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.3e-24 118.6 233 34.8
SEGI_36407 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 1.3e-16 92.0 85 56.5
Mapoly0062s0093 Marchantia polymorpha HOM05D005364 ORTHO05D006554 9.6e-12 75.9 95 43.2
GSVIVG01030984001 Vitis vinifera HOM05D005364 ORTHO05D006554 3.6e-11 73.9 73 52.1
GSVIVG01030987001 Vitis vinifera HOM05D005364 ORTHO05D006554 3.6e-11 73.9 73 52.1
Cre14.g610663 Chlamydomonas reinhardtii HOM05D005364 ORTHO05D006554 3.2e-07 60.8 209 28.2
BcaC09g50006 Brassica carinata HOM05D003452 ORTHO05D004046 2.7e-06 57.8 189 28.0
C01p30090 Brassica napus HOM05D003452 ORTHO05D004046 2.7e-06 57.8 189 28.0
Sp7g29060 Schrenkiella parvula HOM05D003452 ORTHO05D004046 2.7e-06 57.8 131 34.4
BolC1t02953H Brassica oleracea HOM05D003452 ORTHO05D004046 7.9e-06 56.2 182 29.1


User provided reference genes

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