Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 0.0e+00 1438.3 765 100.0
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 3.3e-272 941.8 819 64.7
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 2.3e-270 935.6 828 63.8
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 2.7e-266 922.2 799 65.3
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 7.8e-266 920.6 799 65.0
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 2.0e-261 906.0 824 62.6
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 4.9e-260 901.4 827 61.7
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 4.6e-258 894.8 791 62.7
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 6.0e-258 894.4 813 62.6
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 6.0e-258 894.4 813 62.4
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 9.6e-256 887.1 799 63.0
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 1.8e-254 882.9 819 61.3
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 2.4e-254 882.5 812 61.6
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 1.5e-253 879.8 820 60.4
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 9.9e-253 877.1 862 59.0
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 1.3e-252 876.7 802 62.3
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 8.4e-252 874.0 811 60.3
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 1.4e-251 873.2 812 61.9
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 2.4e-251 872.5 848 58.5
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 7.1e-251 870.9 809 60.4
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 3.5e-250 868.6 791 61.3
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 6.0e-250 867.8 793 61.0
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 2.3e-249 865.9 820 59.8
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 5.1e-249 864.8 818 59.9
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.1e-248 863.6 690 67.0
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 2.5e-248 862.4 811 60.0
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 3.3e-248 862.1 796 61.3
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 1.8e-246 856.3 842 57.1
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 4.0e-246 855.1 793 60.5
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.2e-245 853.6 787 60.2
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 2.0e-245 852.8 811 61.0
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 2.6e-245 852.4 666 68.0
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 3.4e-245 852.0 825 60.2
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 7.6e-245 850.9 824 59.0
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.3e-244 850.1 793 60.3
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 2.9e-244 849.0 810 59.9
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.8e-244 848.6 793 60.3
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 3.8e-244 848.6 676 67.3
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 4.9e-244 848.2 800 60.2
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 4.9e-244 848.2 793 60.0
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 1.4e-243 846.7 814 59.2
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.4e-243 846.7 828 59.4
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 2.4e-243 845.9 815 58.4
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 1.3e-241 840.1 842 58.2
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 1.3e-241 840.1 801 60.4
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 1.8e-241 839.7 743 62.6
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 1.8e-241 839.7 812 58.7
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 5.1e-241 838.2 820 59.5
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 5.1e-241 838.2 803 59.3
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 8.7e-241 837.4 802 59.0
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 2.5e-240 835.9 781 60.9
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 2.5e-240 835.9 802 59.2
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 4.3e-240 835.1 803 59.2
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 5.6e-240 834.7 794 59.7
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 2.8e-239 832.4 790 59.7
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.1e-238 830.5 816 58.5
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 3.1e-238 828.9 816 59.4
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 6.9e-238 827.8 809 58.8
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.0e-236 823.9 795 58.9
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 1.0e-236 823.9 810 58.5
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 2.5e-235 819.3 799 59.1
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 1.6e-234 816.6 630 68.7
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 2.7e-234 815.8 809 58.2
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 1.0e-233 813.9 815 57.5
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 5.1e-233 811.6 667 65.4
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 5.7e-232 808.1 896 53.2
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 2.8e-231 805.8 806 58.6
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 6.2e-231 804.7 817 54.7
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 2.4e-230 802.7 664 61.6
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 6.9e-230 801.2 794 57.6
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.5e-229 800.0 800 58.0
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 1.5e-229 800.0 931 52.5
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 1.5e-229 800.0 799 57.8
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 2.0e-229 799.7 848 55.4
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 2.0e-229 799.7 695 62.2
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.7e-228 796.6 816 57.1
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 1.9e-227 793.1 806 57.2
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 9.3e-227 790.8 811 57.5
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 1.0e-225 787.3 799 56.8
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 3.0e-225 785.8 809 56.6
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 3.9e-225 785.4 813 56.3
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 3.9e-225 785.4 794 57.6
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 3.9e-225 785.4 822 55.8
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 2.5e-224 782.7 837 56.3
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 1.3e-223 780.4 818 54.9
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.0e-221 773.1 810 56.3
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 1.1e-219 767.3 843 53.6
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 9.7e-216 754.2 641 63.8
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 9.7e-216 754.2 821 53.6
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 4.8e-215 751.9 606 65.2
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 3.4e-213 745.7 802 56.5
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 3.8e-212 742.3 807 52.8
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 4.8e-207 725.3 653 59.9
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 2.4e-206 723.0 769 52.7
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 3.7e-191 672.5 818 49.0
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.1e-187 661.0 819 47.1
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.4e-185 654.1 817 49.8
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 5.9e-181 638.6 866 44.0
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 4.0e-177 625.9 488 62.3
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 2.2e-175 620.2 486 62.3
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.1e-174 617.8 817 46.3
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 5.4e-166 589.0 816 45.1
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 1.2e-152 544.7 739 47.4
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 5.3e-129 466.1 641 38.7
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 9.6e-123 445.3 312 68.9
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 1.3e-116 424.9 450 59.3
HPP92_000970 Vanilla planifolia HOM05D004072 ORTHO05D005933 4.3e-107 393.3 308 71.4
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 8.5e-103 379.0 251 72.5
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 2.2e-98 364.4 239 73.6
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 5.2e-92 343.2 504 50.8
Cpa.g.sc17.85 Carica papaya HOM05D004072 ORTHO05D005933 5.5e-86 323.2 216 71.8
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 8.8e-68 262.7 747 30.1
CSS0027246 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.7e-63 248.4 164 73.2
Glyma.09G084500 Glycine max HOM05D004072 ORTHO05D005933 5.2e-60 236.9 279 56.6
CSS0006934 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.0e-56 224.9 214 49.5
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 3.5e-48 197.6 129 75.2
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 1.2e-43 182.6 152 57.2
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 4.6e-40 170.6 290 37.6
VMungo1309G0832 Vigna mungo HOM05D004072 ORTHO05D005933 9.5e-38 162.9 192 52.1
CDE05G2443 Ceratophyllum demersum HOM05D004072 ORTHO05D130441 7.6e-35 153.3 125 76.8
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 2.9e-34 151.4 336 32.1
Cpa.g.sc17.83 Carica papaya HOM05D004072 ORTHO05D005933 4.6e-24 117.5 101 49.5
Hma1.2p1_1600F.1_g293130 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 5.1e-23 114.0 63 90.5
Medtr3g010273 Medicago truncatula HOM05D004072 ORTHO05D005933 8.1e-21 106.7 93 61.3
CSS0009414 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.4e-20 105.1 61 78.7
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 6.4e-18 97.1 288 26.7
CBR_g58028 Chara braunii HOM05D004072 ORTHO05D005933 1.1e-17 96.3 252 26.2
EL10Ac9g22637 Beta vulgaris HOM05D004072 ORTHO05D005933 1.2e-16 92.8 278 27.7
Cpa.g.sc17.87 Carica papaya HOM05D004072 ORTHO05D005933 3.0e-15 88.2 265 26.4
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 3.9e-15 87.8 98 43.9
Nn1g03421 Nelumbo nucifera HOM05D004072 ORTHO05D019491 2.1e-13 82.0 53 66.0
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 3.7e-13 81.3 267 26.2
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 1.4e-12 79.3 231 36.8
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 5.3e-12 77.4 190 33.2
CSS0023750 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 1.3e-10 72.8 196 39.3
CARHR128810 Cardamine hirsuta HOM05D004072 ORTHO05D019491 2.9e-10 71.6 44 68.2
Cpa.g.sc17.84 Carica papaya HOM05D004072 ORTHO05D019491 1.9e-09 68.9 36 86.1
CSS0044654 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.7e-08 65.1 183 25.7
Duzib248G0875 Durio zibethinus HOM05D000121 ORTHO05D000102 1.0e-07 63.2 44 68.2
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.0e-07 63.2 95 38.9
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.3e-07 62.8 177 25.4
Lsat_1_v5_gn_7_25100 Lactuca sativa HOM05D003161 ORTHO05D005173 3.0e-07 61.6 41 61.0
Cpa.g.sc17.88 Carica papaya HOM05D004072 ORTHO05D005933 5.1e-07 60.8 231 23.4
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 8.7e-07 60.1 246 24.0
CDE02G3068 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 1.1e-06 59.7 182 25.8
Lsat_1_v5_gn_5_73260 Lactuca sativa HOM05D000371 ORTHO05D006177 2.5e-06 58.5 57 49.1
Oeu025478.1 Olea europaea HOM05D002278 ORTHO05D007219 2.5e-06 58.5 120 34.2
Ca_19908_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 5.6e-06 57.4 128 29.7
Actinidia04622 Actinidia chinensis HOM05D004072 ORTHO05D019491 7.4e-06 57.0 44 56.8


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