Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.1e-87 326.6 171 100.0
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 8.3e-83 310.5 172 95.9
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 7.0e-66 254.2 175 76.6
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 2.7e-65 252.3 174 77.6
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 3.3e-63 245.4 174 76.4
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 4.3e-63 245.0 173 73.4
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 1.2e-62 243.4 172 73.3
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 6.2e-62 241.1 177 71.8
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 1.4e-61 240.0 176 73.3
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 2.3e-61 239.2 174 73.6
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 2.3e-61 239.2 174 73.0
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 5.2e-61 238.0 176 72.7
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 8.9e-61 237.3 172 71.5
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 8.9e-61 237.3 174 73.0
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 1.2e-60 236.9 174 73.0
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 1.5e-60 236.5 174 72.4
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 2.0e-60 236.1 174 70.1
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 4.4e-60 235.0 175 72.6
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 4.4e-60 235.0 174 72.4
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 5.8e-60 234.6 175 72.6
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 2.9e-59 232.3 182 69.8
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 3.7e-59 231.9 176 71.6
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 6.4e-59 231.1 174 72.4
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 8.3e-59 230.7 175 72.6
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 1.9e-58 229.6 176 70.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.2e-58 228.8 173 71.1
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 4.1e-58 228.4 176 68.2
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 5.4e-58 228.0 172 68.0
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 5.4e-58 228.0 173 71.1
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 7.1e-58 227.6 172 71.5
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 1.2e-57 226.9 174 70.7
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 1.2e-57 226.9 173 70.5
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 1.6e-57 226.5 172 71.5
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 2.1e-57 226.1 172 69.8
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 2.7e-57 225.7 172 69.2
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 2.7e-57 225.7 172 70.9
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 2.7e-57 225.7 172 70.9
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 2.7e-57 225.7 172 70.9
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 7.8e-57 224.2 176 69.9
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 7.8e-57 224.2 176 71.0
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 1.3e-56 223.4 176 71.6
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 1.7e-56 223.0 176 69.3
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 1.7e-56 223.0 176 69.3
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 2.3e-56 222.6 177 71.8
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 5.1e-56 221.5 176 68.8
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 6.6e-56 221.1 174 70.7
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 1.1e-55 220.3 172 69.2
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 2.5e-55 219.2 172 68.6
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 3.3e-55 218.8 177 70.1
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 9.5e-55 217.2 178 67.4
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.2e-54 216.9 149 76.5
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 2.1e-54 216.1 176 68.2
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 2.8e-54 215.7 174 68.4
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 3.6e-54 215.3 175 68.0
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 8.1e-54 214.2 175 67.4
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 8.1e-54 214.2 171 67.3
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 1.1e-53 213.8 175 65.1
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 1.8e-53 213.0 175 65.7
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 1.8e-53 213.0 174 66.7
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 2.3e-53 212.6 178 65.7
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 3.1e-53 212.2 175 65.1
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 3.1e-53 212.2 174 66.7
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 3.1e-53 212.2 172 68.6
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 5.2e-53 211.5 174 66.1
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 5.2e-53 211.5 175 67.4
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 6.8e-53 211.1 179 65.9
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 6.8e-53 211.1 174 66.1
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 6.8e-53 211.1 174 66.1
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 8.9e-53 210.7 172 66.9
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 8.9e-53 210.7 173 65.9
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 8.9e-53 210.7 172 67.4
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 8.9e-53 210.7 172 67.4
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 1.2e-52 210.3 174 66.1
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 1.2e-52 210.3 174 66.1
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 1.2e-52 210.3 175 68.6
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 1.5e-52 209.9 173 65.9
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 2.0e-52 209.5 172 65.1
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 2.0e-52 209.5 170 66.5
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 2.6e-52 209.1 172 64.5
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 3.4e-52 208.8 175 66.3
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 3.4e-52 208.8 175 66.3
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 4.4e-52 208.4 174 67.2
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 4.4e-52 208.4 173 68.8
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 7.6e-52 207.6 170 65.9
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 9.9e-52 207.2 174 64.9
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 1.7e-51 206.5 174 65.5
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 1.7e-51 206.5 174 65.5
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 2.9e-51 205.7 174 65.5
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 2.9e-51 205.7 178 63.5
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 4.9e-51 204.9 175 64.6
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 4.9e-51 204.9 177 67.2
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 4.9e-51 204.9 173 68.2
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 8.3e-51 204.1 172 65.1
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 8.3e-51 204.1 174 67.2
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 1.4e-50 203.4 175 65.1
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 2.4e-50 202.6 174 65.5
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 5.4e-50 201.4 185 62.2
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 2.7e-49 199.1 170 64.1
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 7.8e-49 197.6 176 63.6
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 1.3e-48 196.8 175 64.6
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 1.3e-48 196.8 175 64.6
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 1.3e-48 196.8 180 61.7
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 1.3e-48 196.8 174 66.1
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 3.9e-48 195.3 177 64.4
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 3.9e-48 195.3 172 61.0
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 8.6e-48 194.1 175 63.4
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 1.9e-47 193.0 173 63.6
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 1.9e-47 193.0 177 64.4
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 1.6e-46 189.9 172 61.6
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 1.1e-45 187.2 175 63.4
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 5.2e-45 184.9 130 73.8
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 6.8e-45 184.5 178 60.1
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 2.0e-44 183.0 127 74.8
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 5.8e-44 181.4 127 72.4
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 7.6e-44 181.0 145 72.4
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 2.9e-43 179.1 172 58.1
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 3.2e-42 175.6 145 71.0
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 9.3e-42 174.1 159 63.5
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 1.6e-41 173.3 174 58.6
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 1.6e-41 173.3 174 58.6
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 1.0e-40 170.6 148 68.9
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 6.9e-37 157.9 165 52.7
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 1.7e-35 153.3 145 62.8
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 2.4e-34 149.4 145 61.4
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 7.1e-34 147.9 143 63.6
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 6.6e-32 141.4 82 79.3
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 2.0e-28 129.8 163 49.7
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 5.8e-28 128.3 128 61.7
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 7.6e-28 127.9 73 80.8
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 7.6e-28 127.9 72 81.9
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 1.7e-27 126.7 74 78.4
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 8.4e-27 124.4 72 79.2
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.9e-26 123.2 104 67.3
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.1e-23 114.0 171 44.4
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 1.8e-21 106.7 165 40.0
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 1.3e-19 100.5 108 50.0
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 1.1e-18 97.4 73 63.0
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 4.2e-18 95.5 87 59.8
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 6.0e-17 91.7 110 52.7
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 3.9e-16 89.0 116 54.3
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.1e-15 87.4 107 56.1
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 8.2e-14 81.3 79 51.9
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 6.9e-13 78.2 136 41.2
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 2.0e-12 76.6 103 51.5
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 7.6e-12 74.7 129 45.0
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 5.7e-07 58.5 29 79.3


User provided reference genes

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