Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 2.4e-130 468.8 230 100.0
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.1e-45 187.6 197 49.7
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 2.3e-43 179.9 239 44.8
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 4.7e-41 172.2 236 42.8
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.4e-39 165.6 197 45.7
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 4.4e-39 165.6 190 43.7
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.9e-37 160.2 226 40.3
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.9e-37 160.2 179 44.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 4.6e-36 155.6 203 41.9
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 1.0e-35 154.5 255 41.6
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 3.3e-34 149.4 234 36.3
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.3e-34 149.1 158 46.2
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.6e-34 148.7 218 39.4
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 9.5e-34 147.9 155 45.8
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.6e-33 147.1 224 38.4
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.1e-33 146.7 224 38.4
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 4.7e-33 145.6 180 43.9
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 4.7e-33 145.6 237 37.6
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 8.1e-33 144.8 237 37.6
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.1e-32 144.4 224 36.6
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.8e-32 143.7 223 39.0
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 5.2e-32 142.1 170 41.8
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.5e-31 140.6 209 38.8
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.5e-31 140.6 237 36.7
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.5e-31 140.6 236 39.4
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 2.0e-31 140.2 211 38.9
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 5.8e-31 138.7 210 38.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 7.6e-31 138.3 180 41.1
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 7.6e-31 138.3 180 41.7
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.7e-30 137.1 160 45.0
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.4e-30 135.2 211 35.1
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.1e-29 134.4 168 39.9
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 4.2e-29 132.5 165 45.5
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 9.2e-29 131.3 218 35.8
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.2e-28 131.0 165 45.5
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 3.5e-28 129.4 175 40.6
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.0e-28 128.6 226 36.3
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.0e-27 127.9 163 42.9
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.0e-27 127.9 179 42.5
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 1.5e-26 124.0 173 39.9
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.5e-26 123.2 127 46.5
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 4.3e-26 122.5 182 37.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.3e-25 120.9 171 38.0
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.3e-25 120.9 176 35.8
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.1e-25 120.2 115 49.6
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 3.6e-25 119.4 204 37.3
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 1.1e-24 117.9 218 36.7
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 4.0e-24 115.9 209 34.9
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 6.9e-24 115.2 202 35.6
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 2.2e-22 110.2 175 37.1
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 6.4e-22 108.6 201 34.3
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 1.1e-21 107.8 152 40.1
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 5.4e-21 105.5 238 33.2
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.6e-20 104.0 230 33.5
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.7e-19 100.5 117 43.6
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 2.5e-18 96.7 128 32.0
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 2.8e-17 93.2 240 32.5
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 4.9e-14 82.4 129 33.3
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.4e-13 80.1 147 30.6
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 9.3e-13 78.2 113 33.6
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.3e-11 74.3 122 32.8
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 3.0e-11 73.2 129 37.2
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 4.3e-10 69.3 131 34.4
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 5.6e-10 68.9 168 31.0
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 5.6e-10 68.9 65 50.8
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 7.4e-10 68.6 133 36.1
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 6.9e-08 62.0 116 34.5
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 2.6e-07 60.1 39 64.1


User provided reference genes

Program Settings