Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.3e-43 177.9 87 100.0
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 8.9e-17 90.1 50 90.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.1e-11 73.2 53 64.2
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.9e-11 72.4 52 65.4
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.6e-10 69.3 52 59.6
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.8e-10 68.6 54 61.1
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 2.8e-10 68.6 53 64.2
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 2.8e-10 68.6 53 64.2
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 6.2e-10 67.4 53 62.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 8.1e-10 67.0 53 56.6
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 8.1e-10 67.0 58 56.9
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 8.1e-10 67.0 58 56.9
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 8.1e-10 67.0 53 60.4
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.1e-09 66.6 53 62.3
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.4e-09 66.2 50 62.0
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 2.4e-09 65.5 48 60.4
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.4e-09 65.5 53 58.5
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 3.1e-09 65.1 52 59.6
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 3.1e-09 65.1 50 58.0
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.1e-09 65.1 50 62.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 4.0e-09 64.7 52 57.7
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 4.0e-09 64.7 50 62.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 4.0e-09 64.7 50 62.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 4.0e-09 64.7 50 62.0
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.0e-09 64.7 52 57.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 5.3e-09 64.3 62 53.2
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 5.3e-09 64.3 52 59.6
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 6.9e-09 63.9 62 53.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 9.0e-09 63.5 50 60.0
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 9.0e-09 63.5 52 55.8
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 9.0e-09 63.5 50 58.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.2e-08 63.2 50 60.0
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.5e-08 62.8 62 51.6
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.5e-08 62.8 53 60.4
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.5e-08 62.8 53 56.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.5e-08 62.8 53 56.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.5e-08 62.8 53 56.6
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.5e-08 62.8 62 53.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.0e-08 62.4 50 60.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.0e-08 62.4 45 64.4
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.0e-08 62.4 45 64.4
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.6e-08 62.0 52 57.7
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.6e-08 62.0 50 56.0
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.6e-08 62.0 52 57.7
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 3.4e-08 61.6 58 51.7
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 4.4e-08 61.2 45 57.8
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.4e-08 61.2 62 54.8
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.4e-08 61.2 45 62.2
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 5.8e-08 60.8 53 58.5
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 5.8e-08 60.8 53 58.5
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 5.8e-08 60.8 53 58.5
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 5.8e-08 60.8 53 58.5
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 5.8e-08 60.8 49 51.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 5.8e-08 60.8 52 55.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 5.8e-08 60.8 52 55.8
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 5.8e-08 60.8 45 62.2
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 5.8e-08 60.8 45 62.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 5.8e-08 60.8 53 52.8
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 7.6e-08 60.5 46 54.3
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.9e-08 60.1 53 54.7
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.3e-07 59.7 53 56.6
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.3e-07 59.7 53 56.6
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 1.3e-07 59.7 45 53.3
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.3e-07 59.7 45 60.0
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.3e-07 59.7 45 62.2
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.3e-07 59.7 42 61.9
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.7e-07 59.3 53 54.7
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.7e-07 59.3 45 53.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.7e-07 59.3 45 53.3
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 1.7e-07 59.3 45 64.4
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 1.7e-07 59.3 45 64.4
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.2e-07 58.9 45 53.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 2.2e-07 58.9 53 54.7
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.9e-07 58.5 53 56.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.9e-07 58.5 53 56.6
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.9e-07 58.5 53 56.6
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.9e-07 58.5 53 54.7
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.9e-07 58.5 53 56.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.9e-07 58.5 45 55.6
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.9e-07 58.5 45 60.0
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.9e-07 58.5 45 62.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 3.8e-07 58.2 53 56.6
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 3.8e-07 58.2 53 56.6
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 3.8e-07 58.2 62 50.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 4.9e-07 57.8 45 60.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 4.9e-07 57.8 53 56.6
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 4.9e-07 57.8 45 55.6
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 4.9e-07 57.8 53 52.8
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 4.9e-07 57.8 45 62.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 6.4e-07 57.4 45 51.1
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 6.4e-07 57.4 45 48.9
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 6.4e-07 57.4 51 58.8
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 8.4e-07 57.0 57 50.9
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.9e-06 55.8 53 52.8
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.9e-06 55.8 45 57.8
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.9e-06 55.8 45 53.3
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.4e-06 55.5 45 55.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 5.4e-06 54.3 53 49.1
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 7.1e-06 53.9 45 53.3


User provided reference genes

Program Settings