Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.2e-109 399.8 206 100.0
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.3e-53 213.8 174 60.3
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 3.7e-53 212.2 176 59.7
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 2.2e-50 203.0 156 60.9
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.2e-48 197.2 153 64.7
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 2.7e-48 196.1 179 57.0
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 4.7e-48 195.3 181 56.9
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 8.0e-48 194.5 183 54.1
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.0e-47 194.1 181 56.4
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 2.3e-47 193.0 176 58.5
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 3.0e-47 192.6 159 57.9
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 3.0e-47 192.6 154 63.0
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 5.2e-47 191.8 181 56.9
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.2e-47 191.8 182 56.0
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 6.7e-47 191.4 158 62.0
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 6.7e-47 191.4 176 57.4
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 8.8e-47 191.0 179 57.0
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 8.8e-47 191.0 167 58.7
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 8.8e-47 191.0 180 56.1
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 1.5e-46 190.3 173 56.6
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.5e-46 190.3 159 61.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 1.5e-46 190.3 207 50.2
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.5e-46 190.3 185 56.2
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.0e-46 189.9 178 55.6
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 4.4e-46 188.7 168 58.9
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 5.7e-46 188.3 180 55.6
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 7.5e-46 188.0 145 64.1
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 1.3e-45 187.2 168 58.3
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.7e-45 186.8 167 58.1
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 2.2e-45 186.4 161 57.1
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 2.2e-45 186.4 149 62.4
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 2.8e-45 186.0 192 50.5
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 2.8e-45 186.0 145 62.8
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 2.8e-45 186.0 145 62.8
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 4.8e-45 185.3 149 62.4
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 4.8e-45 185.3 149 62.4
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 4.8e-45 185.3 174 55.7
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 4.8e-45 185.3 155 60.6
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 6.3e-45 184.9 183 53.6
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 8.2e-45 184.5 176 55.7
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.1e-44 184.1 183 53.6
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.4e-44 183.7 185 54.6
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.8e-44 183.3 149 61.1
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.8e-44 183.3 171 57.9
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 3.1e-44 182.6 149 58.4
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.1e-44 182.6 185 54.1
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 4.1e-44 182.2 153 60.8
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.0e-44 181.4 185 54.1
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 7.0e-44 181.4 148 60.8
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 9.1e-44 181.0 173 55.5
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.2e-43 180.6 179 53.6
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-43 180.3 151 57.6
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-43 180.3 151 57.6
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 2.7e-43 179.5 216 45.4
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 4.5e-43 178.7 110 81.8
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 4.5e-43 178.7 169 49.7
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.0e-42 177.6 181 50.8
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 1.3e-42 177.2 193 50.8
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 2.9e-42 176.0 180 50.0
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 3.8e-42 175.6 189 50.3
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 5.0e-42 175.3 168 54.2
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 5.0e-42 175.3 153 59.5
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 5.0e-42 175.3 155 56.1
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 5.0e-42 175.3 177 50.8
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 8.5e-42 174.5 181 50.3
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.5e-42 174.5 176 51.1
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 8.5e-42 174.5 156 56.4
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.1e-41 174.1 188 49.5
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 1.5e-41 173.7 188 50.5
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.5e-41 173.7 154 55.8
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.5e-41 173.7 154 55.8
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.5e-41 173.7 154 55.8
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.5e-41 173.7 154 55.8
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.9e-41 173.3 156 54.5
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 2.5e-41 172.9 184 51.6
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 3.2e-41 172.6 170 53.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 5.5e-41 171.8 154 55.8
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 7.2e-41 171.4 190 49.5
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 7.2e-41 171.4 171 50.3
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.2e-40 170.6 192 48.4
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 2.7e-40 169.5 181 51.4
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 4.7e-40 168.7 151 56.3
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 4.7e-40 168.7 192 47.9
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 4.7e-40 168.7 161 58.4
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 6.1e-40 168.3 153 56.9
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 8.0e-40 167.9 173 52.6
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 1.0e-39 167.5 146 57.5
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.4e-39 167.2 170 52.4
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.8e-39 166.8 193 47.7
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.3e-39 166.4 183 51.9
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 6.8e-39 164.9 151 54.3
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 8.8e-39 164.5 172 51.7
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 2.0e-38 163.3 163 51.5
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 3.4e-38 162.5 136 61.0
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 3.4e-38 162.5 193 50.8
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 9.8e-38 161.0 201 48.3
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.7e-37 160.2 151 53.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 4.8e-37 158.7 195 44.6
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.4e-36 156.4 159 50.9
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 2.4e-36 156.4 142 54.2
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 9.1e-36 154.5 142 52.1
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 3.3e-33 146.0 191 42.4
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 7.2e-33 144.8 151 51.7
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 4.1e-20 102.4 86 52.3
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.0e-18 97.8 122 43.4
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.3e-18 96.7 157 38.9
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 3.0e-18 96.3 157 37.6
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 3.9e-18 95.9 142 33.8
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 3.3e-17 92.8 140 32.1
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.0e-14 83.6 176 33.5
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 4.9e-13 79.0 143 35.0
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 8.3e-13 78.2 106 46.2
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.4e-12 77.4 76 52.6
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.9e-12 77.0 145 35.2
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 5.4e-12 75.5 70 58.6
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 5.4e-12 75.5 168 32.1


User provided reference genes

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