Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4347 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 1.7e-45 185.7 94 100.0
CDE06G1699 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 7.4e-17 90.5 55 81.8
CANSAT54G2857 Cannabis sativa HOM05D003739 ORTHO05D003996 5.5e-12 74.3 55 65.5
Lj6g0022884 Lotus japonicus HOM05D003739 ORTHO05D003996 7.2e-12 73.9 51 66.7
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 1.6e-11 72.8 55 63.6
COL.COLO4_32233 Corchorus olitorius HOM05D003739 ORTHO05D003996 1.6e-11 72.8 83 49.4
LjContig00222g0016564 Lotus japonicus HOM05D003739 ORTHO05D003996 1.6e-11 72.8 55 61.8
ATR0564G411 Amborella trichopoda HOM05D003739 ORTHO05D003996 2.1e-11 72.4 54 61.1
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 2.1e-11 72.4 55 63.6
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 2.1e-11 72.4 55 61.8
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 2.1e-11 72.4 55 63.6
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 2.7e-11 72.0 55 61.8
TAR628G0054 Trochodendron aralioides HOM05D003739 ORTHO05D003996 2.7e-11 72.0 55 61.8
PSO063G1830 Papaver somniferum HOM05D003739 ORTHO05D003996 6.1e-11 70.9 55 61.8
PSO339G5323 Papaver somniferum HOM05D003739 ORTHO05D003996 6.1e-11 70.9 55 61.8
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 6.1e-11 70.9 55 58.2
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 7.9e-11 70.5 55 60.0
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 1.0e-10 70.1 55 61.8
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.8e-10 69.3 55 58.2
TPR.G2246 Trifolium pratense HOM05D003739 ORTHO05D003996 1.8e-10 69.3 55 60.0
Psat7g051640 Pisum sativum HOM05D003739 ORTHO05D003996 2.3e-10 68.9 55 60.0
Sed0001527 Sechium edule HOM05D003739 ORTHO05D003996 2.3e-10 68.9 58 55.2
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea HOM05D003739 ORTHO05D003996 3.0e-10 68.6 55 58.2
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 3.0e-10 68.6 55 58.2
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 3.0e-10 68.6 50 62.0
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 3.0e-10 68.6 55 60.0
Manes.11G084700 Manihot esculenta HOM05D003739 ORTHO05D003996 3.0e-10 68.6 55 58.2
CsaV3_5G020720 Cucumis sativus L. HOM05D003739 ORTHO05D003996 3.9e-10 68.2 56 53.6
Medtr8g091830 Medicago truncatula HOM05D003739 ORTHO05D003996 3.9e-10 68.2 55 58.2
Nitab4.5_0004903g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 5.1e-10 67.8 55 56.4
Nitab4.5_0006794g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 5.1e-10 67.8 55 56.4
Nitab4.5_0010401g0020 Nicotiana tabacum HOM05D003739 ORTHO05D003996 5.1e-10 67.8 55 56.4
TAR376G0790 Trochodendron aralioides HOM05D003739 ORTHO05D003996 5.1e-10 67.8 55 60.0
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea HOM05D003739 ORTHO05D003996 8.8e-10 67.0 45 64.4
ECA234G4722 Erigeron canadensis HOM05D003739 ORTHO05D003996 1.1e-09 66.6 54 51.9
Lalb_Chr11g0068001 Lupinus albus HOM05D003739 ORTHO05D003996 1.1e-09 66.6 55 58.2
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 1.1e-09 66.6 55 56.4
Actinidia35828 Actinidia chinensis HOM05D003739 ORTHO05D003996 1.5e-09 66.2 55 54.5
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 2.0e-09 65.9 63 55.6
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 2.0e-09 65.9 56 53.6
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 2.5e-09 65.5 55 54.5
Lj8C306T17 Lonicera japonica HOM05D003739 ORTHO05D003996 2.5e-09 65.5 49 63.3
MBI16_g35489_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 2.5e-09 65.5 49 65.3
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 3.3e-09 65.1 55 58.2
PGSC0003DMG402017733 Solanum tuberosum HOM05D003739 ORTHO05D003996 3.3e-09 65.1 55 54.5
PSO541G6540 Papaver somniferum HOM05D003739 ORTHO05D003996 5.7e-09 64.3 55 56.4
PSO675G5166 Papaver somniferum HOM05D003739 ORTHO05D003996 5.7e-09 64.3 55 56.4
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 5.7e-09 64.3 53 58.5
Dinv05659 Davidia involucrata HOM05D003739 ORTHO05D003996 7.4e-09 63.9 55 54.5
Nn4g24182 Nelumbo nucifera HOM05D003739 ORTHO05D003996 7.4e-09 63.9 55 56.4
Migut.F00900 Erythranthe guttata HOM05D003739 ORTHO05D003996 9.7e-09 63.5 55 54.5
Sopen02g026250 Solanum pennellii HOM05D003739 ORTHO05D003996 9.7e-09 63.5 55 52.7
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 1.3e-08 63.2 55 52.7
SEGI_13436 Sequoiadendron giganteum HOM05D003739 ORTHO05D003996 1.7e-08 62.8 55 54.5
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 2.8e-08 62.0 65 47.7
AUR62005990 Chenopodium quinoa HOM05D003739 ORTHO05D003996 2.8e-08 62.0 55 50.9
FvH4_2g09520 Fragaria vesca HOM05D003739 ORTHO05D003996 2.8e-08 62.0 56 51.8
FAN24G2517 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.8e-08 62.0 56 51.8
FAN27G2905 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.8e-08 62.0 56 51.8
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 2.8e-08 62.0 55 52.7
Ca_17694_v3 Cicer arietinum L. HOM05D003739 ORTHO05D003996 3.7e-08 61.6 41 68.3
HanXRQChr10g0289001 Helianthus annuus HOM05D003739 ORTHO05D003996 3.7e-08 61.6 57 50.9
PGR042G2822 Punica granatum HOM05D003739 ORTHO05D003996 3.7e-08 61.6 64 51.6
AL7G11100 Arabidopsis lyrata HOM05D003739 ORTHO05D003996 4.8e-08 61.2 55 52.7
AUR62028080 Chenopodium quinoa HOM05D003739 ORTHO05D003996 6.3e-08 60.8 55 49.1
Eucgr.A01623 Eucalyptus grandis HOM05D003739 ORTHO05D003996 6.3e-08 60.8 55 56.4
Pp3c18_8710 Physcomitrium patens HOM05D003739 ORTHO05D003996 6.3e-08 60.8 45 64.4
Sabra10G0016300 Salix brachista HOM05D003739 ORTHO05D003996 6.3e-08 60.8 45 62.2
SalBow6G4317 Salvia bowleyana HOM05D003739 ORTHO05D003996 6.3e-08 60.8 55 49.1
AT4G39160 Arabidopsis thaliana HOM05D003739 ORTHO05D003996 8.2e-08 60.5 55 52.7
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 8.2e-08 60.5 53 56.6
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 8.2e-08 60.5 61 52.5
unitig_46.g18632 Utricularia gibba HOM05D003739 ORTHO05D003996 8.2e-08 60.5 55 50.9
HPP92_028201 Vanilla planifolia HOM05D003739 ORTHO05D003996 8.2e-08 60.5 55 50.9
Aa31LG6G16100 Aethionema arabicum HOM05D003739 ORTHO05D003996 1.1e-07 60.1 55 49.1
Cpa.g.sc14.123 Carica papaya HOM05D003739 ORTHO05D003996 1.1e-07 60.1 53 50.9
Phvul.002G039700 Phaseolus vulgaris HOM05D003739 ORTHO05D003996 1.1e-07 60.1 55 49.1
Gohir.D09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 1.4e-07 59.7 53 54.7
Gorai.006G107300 Gossypium raimondii HOM05D003739 ORTHO05D003996 1.4e-07 59.7 53 54.7
RcHm_v2.0_Chr6g0265811 Rosa chinensis HOM05D003739 ORTHO05D003996 1.4e-07 59.7 56 50.0
Hund09717 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.4e-07 59.7 56 46.4
vmacro15435 Vaccinium macrocarpon HOM05D003739 ORTHO05D003996 1.4e-07 59.7 53 54.7
Atru.chr12.1298 Acer truncatum HOM05D003739 ORTHO05D003996 1.8e-07 59.3 56 53.6
Aqoxy2G03991 Aquilegia oxysepala HOM05D003739 ORTHO05D003996 1.8e-07 59.3 51 54.9
Lsat_1_v5_gn_5_112881 Lactuca sativa HOM05D003739 ORTHO05D003996 1.8e-07 59.3 55 49.1
Mapoly0023s0090 Marchantia polymorpha HOM05D003739 ORTHO05D003996 2.4e-07 58.9 45 60.0
Medtr4g067250 Medicago truncatula HOM05D003739 ORTHO05D003996 2.4e-07 58.9 62 45.2
Pp3c21_11880 Physcomitrium patens HOM05D003739 ORTHO05D003996 2.4e-07 58.9 45 60.0
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 2.4e-07 58.9 55 47.3
AagrBONN_evm.TU.Sc2ySwM_368.1462 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.1e-07 58.5 51 56.9
Peaxi162Scf00048g01417 Petunia axillaris HOM05D003739 ORTHO05D003996 4.1e-07 58.2 55 50.9
AagrBONN_evm.TU.Sc2ySwM_340.755 Anthoceros agrestis HOM05D003739 ORTHO05D003996 5.3e-07 57.8 45 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3723 Anthoceros agrestis HOM05D003739 ORTHO05D003996 5.3e-07 57.8 45 60.0
BcaNung03888 Brassica carinata HOM05D003739 ORTHO05D003996 5.3e-07 57.8 55 49.1
Glyma.11G010900 Glycine max HOM05D003739 ORTHO05D003996 6.9e-07 57.4 51 51.0
Sp3g07810 Schrenkiella parvula HOM05D003739 ORTHO05D000043 6.9e-07 57.4 55 47.3
Atru.chr5.3065 Acer truncatum HOM05D003739 ORTHO05D003996 1.2e-06 56.6 56 51.8
FAN15G1163 Fragaria x ananassa HOM05D003739 ORTHO05D003996 1.2e-06 56.6 56 46.4
A08p23790 Brassica napus HOM05D003739 ORTHO05D003996 1.5e-06 56.2 55 45.5
BraA08t34331Z Brassica rapa HOM05D003739 ORTHO05D003996 1.5e-06 56.2 55 45.5
Hund09716 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.5e-06 56.2 56 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4525 Anthoceros agrestis HOM05D003739 ORTHO05D003996 2.0e-06 55.8 50 54.0
EL10Ac3g05170 Beta vulgaris HOM05D003739 ORTHO05D003996 2.0e-06 55.8 54 46.3
BcaC01g00285 Brassica carinata HOM05D000394 ORTHO05D000299 2.0e-06 55.8 55 43.6
C03p77640 Brassica napus HOM05D003739 ORTHO05D003996 2.0e-06 55.8 55 43.6
BolC3t20021H Brassica oleracea HOM05D003739 ORTHO05D003996 2.0e-06 55.8 55 43.6
CARHR112440 Cardamine hirsuta HOM05D003739 ORTHO05D003996 2.6e-06 55.5 50 50.0
THA.LOC104800691 Tarenaya hassleriana HOM05D003739 ORTHO05D003996 2.6e-06 55.5 45 51.1
Thhalv10024751m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 3.4e-06 55.1 49 49.0
Aa31LG7G15010 Aethionema arabicum HOM05D003739 ORTHO05D003996 4.5e-06 54.7 55 47.3
RcHm_v2.0_Chr5g0054461 Rosa chinensis HOM05D003739 ORTHO05D003996 4.5e-06 54.7 56 46.4
TPR.G2191 Trifolium pratense HOM05D003739 ORTHO05D003996 4.5e-06 54.7 50 56.0
BcaNung02353 Brassica carinata HOM05D003739 ORTHO05D003996 5.9e-06 54.3 55 47.3
C07p63340 Brassica napus HOM05D003739 ORTHO05D003996 5.9e-06 54.3 55 47.3
BolC7t46745H Brassica oleracea HOM05D003739 ORTHO05D003996 5.9e-06 54.3 55 47.3


User provided reference genes

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