Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4319 Ceratophyllum demersum HOM05D004978 ORTHO05D005621 9.2e-237 823.2 416 100.0
Nn1g02459 Nelumbo nucifera HOM05D004978 ORTHO05D005621 9.0e-91 338.2 537 41.9
Aqoxy5G00398 Aquilegia oxysepala HOM05D004978 ORTHO05D005621 1.1e-85 321.2 516 40.5
PSO832G2480 Papaver somniferum HOM05D004978 ORTHO05D005621 1.1e-85 321.2 534 39.0
Gohir.D08G072400 Gossypium hirsutum HOM05D004978 ORTHO05D005621 1.5e-85 320.9 541 39.4
TWI75G1276 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 1.5e-85 320.9 537 39.7
PSO210G1189 Papaver somniferum HOM05D004978 ORTHO05D005621 1.9e-85 320.5 532 39.3
Dinv32884 Davidia involucrata HOM05D004978 ORTHO05D005621 3.3e-85 319.7 535 38.9
CiPaw.07G086800 Carya illinoinensis HOM05D004978 ORTHO05D005621 7.4e-85 318.5 526 38.4
Potri.005G215200 Populus trichocarpa HOM05D004978 ORTHO05D005621 7.4e-85 318.5 534 39.0
Gorai.004G076600 Gossypium raimondii HOM05D004978 ORTHO05D005621 3.7e-84 316.2 541 39.2
Thecc.01G271500 Theobroma cacao HOM05D004978 ORTHO05D005621 1.1e-83 314.7 537 39.1
HanXRQChr04g0113941 Helianthus annuus HOM05D004978 ORTHO05D005621 1.4e-83 314.3 506 39.9
Gohir.A08G063900 Gossypium hirsutum HOM05D004978 ORTHO05D005621 3.1e-83 313.2 540 38.5
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 9.0e-83 311.6 539 38.6
Cc01_g19000 Coffea canephora HOM05D004978 ORTHO05D005621 9.0e-83 311.6 513 40.2
DCAR_002701 Daucus carota HOM05D004978 ORTHO05D005621 7.6e-82 308.5 554 37.7
Migut.D00356 Erythranthe guttata HOM05D004978 ORTHO05D005621 1.0e-81 308.1 546 38.6
CAN.G433.6 Capsicum annuum HOM05D004978 ORTHO05D005621 2.2e-81 307.0 542 39.1
PGR044G1133 Punica granatum HOM05D004978 ORTHO05D005621 3.8e-81 306.2 535 38.1
Sopen09g027430 Solanum pennellii HOM05D004978 ORTHO05D005621 1.4e-80 304.3 538 37.9
AUR62011971 Chenopodium quinoa HOM05D004978 ORTHO05D005621 2.5e-80 303.5 538 39.0
MD11G1278700 Malus domestica HOM05D004978 ORTHO05D005621 3.2e-80 303.1 534 38.6
Nitab4.5_0004115g0020 Nicotiana tabacum HOM05D004978 ORTHO05D005621 3.2e-80 303.1 545 37.8
Solyc09g065690.4 Solanum lycopersicum HOM05D004978 ORTHO05D005621 3.2e-80 303.1 538 37.9
CANSAT25G0263 Cannabis sativa HOM05D004978 ORTHO05D005621 1.2e-79 301.2 539 38.8
Lj5g0010127 Lotus japonicus HOM05D004978 ORTHO05D005621 7.9e-79 298.5 550 37.3
Glyma.10G029800 Glycine max HOM05D004978 ORTHO05D005621 1.0e-78 298.1 533 37.1
Peaxi162Scf00259g00051 Petunia axillaris HOM05D004978 ORTHO05D005621 1.8e-78 297.4 520 39.4
FAN24G2655 Fragaria x ananassa HOM05D004978 ORTHO05D005621 3.0e-78 296.6 550 36.9
FAN27G2645 Fragaria x ananassa HOM05D004978 ORTHO05D005621 5.1e-78 295.8 554 36.8
Nitab4.5_0000459g0120 Nicotiana tabacum HOM05D004978 ORTHO05D005621 6.7e-78 295.4 538 38.1
Phvul.007G175000 Phaseolus vulgaris HOM05D004978 ORTHO05D005621 8.7e-78 295.0 527 37.4
QL12p042266 Quercus lobata HOM05D004978 ORTHO05D005621 1.5e-77 294.3 531 37.5
Atru.chr5.1521 Acer truncatum HOM05D004978 ORTHO05D005621 1.9e-77 293.9 566 35.7
Cfa006202 Carpinus fangiana HOM05D004978 ORTHO05D005621 4.3e-77 292.7 546 36.3
AUR62032283 Chenopodium quinoa HOM05D004978 ORTHO05D005621 4.3e-77 292.7 585 36.4
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea HOM05D004978 ORTHO05D005621 5.7e-77 292.4 562 35.6
Lalb_Chr02g0142521 Lupinus albus HOM05D004978 ORTHO05D005621 5.7e-77 292.4 550 36.2
Lsat_1_v5_gn_8_93980 Lactuca sativa HOM05D004978 ORTHO05D005621 9.7e-77 291.6 463 41.7
Psat6g058480 Pisum sativum HOM05D004978 ORTHO05D005621 3.7e-76 289.7 551 35.6
Sed0003895 Sechium edule HOM05D004978 ORTHO05D005621 8.2e-76 288.5 540 36.7
CsaV3_7G027890 Cucumis sativus L. HOM05D004978 ORTHO05D005621 6.9e-75 285.4 545 36.9
Aa31LG9G14570 Aethionema arabicum HOM05D004978 ORTHO05D005621 1.2e-74 284.6 523 38.4
ClCG09G007410 Citrullus lanatus HOM05D004978 ORTHO05D005621 2.6e-74 283.5 542 36.3
COL.COLO4_09187 Corchorus olitorius HOM05D004978 ORTHO05D005621 5.9e-74 282.3 537 37.2
Ah.11g050220 Amaranthus hybridus HOM05D004978 ORTHO05D005621 1.0e-73 281.6 496 38.5
ECA236G1829 Erigeron canadensis HOM05D004978 ORTHO05D005621 2.2e-73 280.4 519 37.0
vmacro14887 Vaccinium macrocarpon HOM05D004978 ORTHO05D005621 2.9e-73 280.0 525 36.6
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 5.0e-73 279.3 526 37.1
FAN20G1006 Fragaria x ananassa HOM05D004978 ORTHO05D005621 5.0e-73 279.3 575 34.8
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea HOM05D004978 ORTHO05D005621 6.5e-73 278.9 518 37.3
BcaB01g04828 Brassica carinata HOM05D004978 ORTHO05D005621 8.5e-73 278.5 529 37.1
CARHR193040 Cardamine hirsuta HOM05D004978 ORTHO05D005621 1.9e-72 277.3 533 36.6
Duzib133G0140 Durio zibethinus HOM05D004978 ORTHO05D005621 1.9e-72 277.3 469 38.6
Haze_04642 Corylus avellana HOM05D004978 ORTHO05D005621 4.2e-72 276.2 543 34.8
FAN15G0608 Fragaria x ananassa HOM05D004978 ORTHO05D005621 4.2e-72 276.2 610 33.3
C03p11220 Brassica napus HOM05D004978 ORTHO05D005621 5.5e-72 275.8 529 36.9
BolC3t13593H Brassica oleracea HOM05D004978 ORTHO05D005621 1.6e-71 274.2 529 36.9
Medtr1g071300 Medicago truncatula HOM05D004978 ORTHO05D005621 2.1e-71 273.9 537 35.2
ATR0665G047 Amborella trichopoda HOM05D004978 ORTHO05D005621 1.0e-70 271.6 521 36.7
Hund09547 Selenicereus undatus HOM05D004978 ORTHO05D005621 1.4e-70 271.2 576 35.1
AL6G31360 Arabidopsis lyrata HOM05D004978 ORTHO05D005621 1.8e-70 270.8 526 37.1
Ca_09727_v3 Cicer arietinum L. HOM05D004978 ORTHO05D005621 2.3e-70 270.4 517 36.4
AT5G19840 Arabidopsis thaliana HOM05D004978 ORTHO05D005621 7.4e-69 265.4 526 36.7
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 1.3e-68 264.6 550 35.5
SGA_v2.0_scaffold1G00534 Striga asiatica HOM05D004978 ORTHO05D005621 1.3e-68 264.6 615 33.7
BcaB01g04842 Brassica carinata HOM05D004978 ORTHO05D005621 2.2e-68 263.8 546 35.5
Sed0016751 Sechium edule HOM05D004978 ORTHO05D005621 3.7e-68 263.1 511 35.4
MELO3C015807.2 Cucumis melo HOM05D004978 ORTHO05D005621 1.4e-67 261.2 524 35.7
Thhalv10013262m.g Eutrema salsugineum HOM05D004978 ORTHO05D005621 2.9e-65 253.4 505 35.8
Prupe.8G234700 Prunus persica HOM05D004978 ORTHO05D005621 2.7e-63 246.9 419 39.1
Sp6g24570 Schrenkiella parvula HOM05D004978 ORTHO05D005621 2.7e-63 246.9 506 36.6
QL01p000805 Quercus lobata HOM05D004978 ORTHO05D005621 1.7e-60 237.7 481 36.4
Rhsim01G0272000 Rhododendron simsii HOM05D004978 ORTHO05D005621 4.5e-58 229.6 500 35.4
FvH4_2g22940 Fragaria vesca HOM05D004978 ORTHO05D005621 2.9e-57 226.9 474 34.6
Eucgr.K03324 Eucalyptus grandis HOM05D004978 ORTHO05D005621 2.1e-55 220.7 464 36.6
Manes.05G081900 Manihot esculenta HOM05D004978 ORTHO05D005621 9.7e-53 211.8 405 37.3
Zm00001eb370120 Zea mays HOM05D004978 ORTHO05D005621 1.1e-51 208.4 391 38.6
Cpa.g.sc52.119 Carica papaya HOM05D004978 ORTHO05D005621 2.0e-50 204.1 195 53.3
PGSC0003DMG400019309 Solanum tuberosum HOM05D004978 ORTHO05D005621 1.0e-49 201.8 202 52.0
TAR636G0163 Trochodendron aralioides HOM05D004978 ORTHO05D005621 1.7e-49 201.1 206 52.9
Sc05g0001310 Simmondsia chinensis HOM05D004978 ORTHO05D005621 2.9e-49 200.3 205 50.7
CSS0039116 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 8.5e-49 198.7 456 33.8
Sabra05G0164500 Salix brachista HOM05D004978 ORTHO05D005621 7.2e-48 195.7 202 49.5
VMungo0720G1803 Vigna mungo HOM05D004978 ORTHO05D005621 1.2e-47 194.9 208 48.6
GSVIVG01003121001 Vitis vinifera HOM05D004978 ORTHO05D005621 1.6e-47 194.5 206 50.5
EL10Ac5g10492 Beta vulgaris HOM05D004978 ORTHO05D005621 2.1e-47 194.1 206 50.0
MD03G1258000 Malus domestica HOM05D004978 ORTHO05D005621 2.3e-46 190.7 204 50.0
HPP92_027617 Vanilla planifolia HOM05D004978 ORTHO05D005621 1.8e-43 181.0 195 47.2
Sc05g0001300 Simmondsia chinensis HOM05D004978 ORTHO05D005621 3.1e-43 180.3 165 57.0
RcHm_v2.0_Chr6g0289911 Rosa chinensis HOM05D004978 ORTHO05D005621 4.1e-43 179.9 374 34.8
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 2.7e-42 177.2 457 33.3
HPP92_022056 Vanilla planifolia HOM05D004978 ORTHO05D005621 3.5e-42 176.8 194 47.4
GSVIVG01003120001 Vitis vinifera HOM05D004978 ORTHO05D005621 6.5e-41 172.6 217 47.9
Carub.0006s1818 Capsella rubella HOM05D004978 ORTHO05D005621 1.1e-40 171.8 192 49.5
Actinidia24924 Actinidia chinensis HOM05D004978 ORTHO05D005621 1.2e-37 161.8 168 54.2
HPP92_022057 Vanilla planifolia HOM05D004978 ORTHO05D005621 2.6e-37 160.6 191 50.3
Oeu014736.1 Olea europaea HOM05D004978 ORTHO05D005621 7.5e-37 159.1 182 51.6
TWI12G0244 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 3.7e-36 156.8 173 49.1
VMungo0720G1640 Vigna mungo HOM05D004978 ORTHO05D005621 4.9e-36 156.4 191 46.6
MD03G1258100 Malus domestica HOM05D004978 ORTHO05D005621 1.1e-35 155.2 170 51.8
unitig_0.g1132 Utricularia gibba HOM05D004978 ORTHO05D005621 1.8e-35 154.5 481 29.9
PSO339G3362 Papaver somniferum HOM05D004978 ORTHO05D005621 1.6e-34 151.4 161 49.7
Carub.0006s1819 Capsella rubella HOM05D004978 ORTHO05D005621 2.0e-34 151.0 173 47.4
PGSC0003DMG400019310 Solanum tuberosum HOM05D004978 ORTHO05D005621 7.8e-34 149.1 193 46.1
Mapoly0003s0071 Marchantia polymorpha HOM05D004978 ORTHO05D005621 3.3e-32 143.7 546 24.4
Cpa.g.sc52.118 Carica papaya HOM05D004978 ORTHO05D005621 4.3e-32 143.3 154 50.6
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis HOM05D004978 ORTHO05D005621 1.4e-30 138.3 531 25.2
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 1.5e-29 134.8 386 33.2
Lj2A1164T58 Lonicera japonica HOM05D004978 ORTHO05D005621 3.4e-29 133.7 154 50.6
Pp3c26_13750 Physcomitrium patens HOM05D004978 ORTHO05D005621 2.4e-27 127.5 611 23.9
TAR636G2873 Trochodendron aralioides HOM05D004978 ORTHO05D005621 3.5e-26 123.6 84 71.4
RcHm_v2.0_Chr6g0289901 Rosa chinensis HOM05D004978 ORTHO05D005621 1.1e-24 118.6 93 55.9
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 1.4e-22 111.7 356 33.4
Glyma.02G144333 Glycine max HOM05D004978 ORTHO05D005621 1.5e-21 108.2 84 59.5
Os01g0773200 Oryza sativa ssp. japonica HOM05D004978 ORTHO05D005621 7.8e-18 95.9 92 51.1
TPR.G34891 Trifolium pratense HOM05D004978 ORTHO05D005621 1.0e-17 95.5 101 51.5
SEGI_31795 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 3.9e-17 93.6 77 57.1
Sabra02G0039000 Salix brachista HOM05D004978 ORTHO05D005621 2.5e-16 90.9 71 50.7
Duzib211G0075 Durio zibethinus HOM05D004978 ORTHO05D005621 7.3e-16 89.4 94 48.9
SEGI_33448 Sequoiadendron giganteum HOM05D004978 ORTHO05D000001 2.3e-14 84.3 71 62.0
Cre09.g407110 Chlamydomonas reinhardtii HOM05D004978 ORTHO05D005621 1.2e-13 82.0 218 32.1
Lalb_Chr06g0162781 Lupinus albus HOM05D004978 ORTHO05D005621 3.4e-13 80.5 64 57.8
Cc00_g12310 Coffea canephora HOM05D004978 ORTHO05D005621 6.4e-12 76.3 57 61.4
SEGI_30706 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 1.8e-06 58.2 55 43.6


User provided reference genes

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