Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4309 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 1.4e-84 316.2 155 100.0
CDE11G0740 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 1.8e-36 156.4 85 91.8
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 1.2e-11 73.9 89 51.7
Lsat_1_v5_gn_2_55301 Lactuca sativa HOM05D006872 ORTHO05D006261 1.5e-11 73.6 75 57.3
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 2.0e-11 73.2 87 50.6
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 3.4e-11 72.4 67 65.7
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 4.5e-11 72.0 87 50.6
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 5.9e-11 71.6 86 50.0
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 7.7e-11 71.2 65 58.5
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 7.7e-11 71.2 65 58.5
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 1.0e-10 70.9 64 59.4
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 1.0e-10 70.9 82 51.2
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 1.0e-10 70.9 86 46.5
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.0e-10 70.9 68 60.3
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.3e-10 70.5 96 45.8
Migut.L01821 Erythranthe guttata HOM05D006872 ORTHO05D006261 1.7e-10 70.1 66 57.6
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 1.7e-10 70.1 82 51.2
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 2.2e-10 69.7 65 56.9
Ca_09043_v3 Cicer arietinum L. HOM05D006872 ORTHO05D006261 2.2e-10 69.7 57 64.9
Sed0018559 Sechium edule HOM05D006872 ORTHO05D006261 2.2e-10 69.7 82 50.0
ATR0772G099 Amborella trichopoda HOM05D006872 ORTHO05D006261 2.9e-10 69.3 61 62.3
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.9e-10 69.3 68 60.3
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 2.9e-10 69.3 103 44.7
CsaV3_6G040990 Cucumis sativus L. HOM05D006872 ORTHO05D006261 6.5e-10 68.2 83 47.0
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 6.5e-10 68.2 92 44.6
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 8.5e-10 67.8 82 48.8
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 8.5e-10 67.8 93 47.3
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.1e-09 67.4 82 47.6
Duzib106G0826 Durio zibethinus HOM05D006872 ORTHO05D006261 1.1e-09 67.4 88 46.6
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 1.1e-09 67.4 65 52.3
Glyma.19G198100 Glycine max HOM05D006872 ORTHO05D006261 1.1e-09 67.4 79 53.2
Hma1.2p1_1442F.1_g283790 Hydrangea macrophylla HOM05D006872 ORTHO05D006261 1.1e-09 67.4 84 50.0
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.1e-09 67.4 96 45.8
Lalb_Chr20g0111461 Lupinus albus HOM05D006872 ORTHO05D006261 1.4e-09 67.0 73 53.4
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.4e-09 67.0 67 53.7
AUR62006268 Chenopodium quinoa HOM05D006872 ORTHO05D006261 1.9e-09 66.6 68 55.9
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 1.9e-09 66.6 73 53.4
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 1.9e-09 66.6 73 53.4
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 2.5e-09 66.2 65 61.5
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 2.5e-09 66.2 75 53.3
Ah.08g210170 Amaranthus hybridus HOM05D006872 ORTHO05D006261 3.2e-09 65.9 91 47.3
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 3.2e-09 65.9 73 53.4
Sed0014477 Sechium edule HOM05D006872 ORTHO05D006261 4.2e-09 65.5 86 44.2
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 4.2e-09 65.5 101 40.6
CiPaw.09G018900 Carya illinoinensis HOM05D006872 ORTHO05D006261 5.5e-09 65.1 73 46.6
MELO3C024577.2 Cucumis melo HOM05D006872 ORTHO05D006261 5.5e-09 65.1 83 47.0
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.2e-09 64.7 80 48.8
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 7.2e-09 64.7 84 47.6
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 9.4e-09 64.3 58 56.9
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 9.4e-09 64.3 80 52.5
ClCG10G018510 Citrullus lanatus HOM05D006872 ORTHO05D006261 1.2e-08 63.9 58 56.9
ECA233G2821 Erigeron canadensis HOM05D001423 ORTHO05D001412 1.2e-08 63.9 65 55.4
HanXRQChr13g0398221 Helianthus annuus HOM05D006872 ORTHO05D006261 1.2e-08 63.9 82 47.6
HanXRQChr15g0494731 Helianthus annuus HOM05D006872 ORTHO05D006261 1.2e-08 63.9 86 48.8
Psat3g030200 Pisum sativum HOM05D006872 ORTHO05D006261 1.2e-08 63.9 82 50.0
QL07p037475 Quercus lobata HOM05D006872 ORTHO05D006261 1.2e-08 63.9 64 53.1
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 1.2e-08 63.9 96 42.7
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 1.6e-08 63.5 58 56.9
AUR62037038 Chenopodium quinoa HOM05D006872 ORTHO05D006261 2.1e-08 63.2 73 53.4
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 2.7e-08 62.8 61 57.4
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 2.7e-08 62.8 61 57.4
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 2.7e-08 62.8 61 57.4
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 2.7e-08 62.8 61 57.4
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 2.7e-08 62.8 98 40.8
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 3.6e-08 62.4 96 44.8
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 3.6e-08 62.4 58 58.6
Ciclev10013044m.g Citrus clementina HOM05D006872 ORTHO05D006261 4.6e-08 62.0 66 56.1
Phvul.007G269600 Phaseolus vulgaris HOM05D006872 ORTHO05D006261 4.6e-08 62.0 87 43.7
Sc20g0006630 Simmondsia chinensis HOM05D006872 ORTHO05D006261 4.6e-08 62.0 67 55.2
EL10Ac7g16814 Beta vulgaris HOM05D006872 ORTHO05D006261 6.1e-08 61.6 71 49.3
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 6.1e-08 61.6 66 56.1
SalBow5G3820 Salvia bowleyana HOM05D006872 ORTHO05D006261 6.1e-08 61.6 58 60.3
Atru.chr8.1395 Acer truncatum HOM05D006872 ORTHO05D006261 7.9e-08 61.2 93 39.8
MSTRG.26609 Avicennia marina HOM05D006872 ORTHO05D006261 7.9e-08 61.2 58 58.6
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 7.9e-08 61.2 65 50.8
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 1.0e-07 60.8 75 48.0
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 1.0e-07 60.8 99 39.4
Lj1g0011262 Lotus japonicus HOM05D006872 ORTHO05D006261 1.0e-07 60.8 57 56.1
Oeu009304.1 Olea europaea HOM05D006872 ORTHO05D006261 1.0e-07 60.8 65 52.3
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.8e-07 60.1 79 48.1
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.8e-07 60.1 75 42.7
Lsat_1_v5_gn_5_87380 Lactuca sativa HOM05D006872 ORTHO05D006261 2.3e-07 59.7 60 58.3
Glyma.10G078000 Glycine max HOM05D006872 ORTHO05D006261 3.0e-07 59.3 76 47.4
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 3.0e-07 59.3 93 43.0
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 3.9e-07 58.9 59 54.2
Glyma.02G198900 Glycine max HOM05D006872 ORTHO05D006261 3.9e-07 58.9 66 48.5
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 3.9e-07 58.9 65 49.2
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 3.9e-07 58.9 75 46.7
unitig_578.g16361 Utricularia gibba HOM05D006872 ORTHO05D006261 3.9e-07 58.9 59 59.3
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 5.1e-07 58.5 80 45.0
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 5.1e-07 58.5 87 42.5
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 5.1e-07 58.5 73 46.6
SalBow6G0243 Salvia bowleyana HOM05D006872 ORTHO05D006261 5.1e-07 58.5 67 53.7
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 6.7e-07 58.2 71 53.5
THA.LOC104816611 Tarenaya hassleriana HOM05D006872 ORTHO05D006261 6.7e-07 58.2 59 57.6
VMungo0720G0028 Vigna mungo HOM05D006872 ORTHO05D006261 6.7e-07 58.2 59 52.5
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 8.8e-07 57.8 59 54.2
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 8.8e-07 57.8 59 54.2
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 8.8e-07 57.8 59 54.2
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 8.8e-07 57.8 79 46.8
Nn4g22751 Nelumbo nucifera HOM05D006872 ORTHO05D006261 8.8e-07 57.8 51 58.8
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 1.1e-06 57.4 96 37.5
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 1.1e-06 57.4 107 43.0
Medtr7g105820 Medicago truncatula HOM05D006872 ORTHO05D006261 1.1e-06 57.4 82 46.3
FAN09G3456 Fragaria x ananassa HOM05D006872 ORTHO05D006261 1.5e-06 57.0 60 53.3
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 2.0e-06 56.6 82 41.5
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 2.0e-06 56.6 59 50.8
Cpa.g.sc104.60 Carica papaya HOM05D006872 ORTHO05D006261 2.5e-06 56.2 89 40.4
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 2.5e-06 56.2 106 42.5
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 3.3e-06 55.8 84 40.5
CARHR162280 Cardamine hirsuta HOM05D006872 ORTHO05D006261 3.3e-06 55.8 68 50.0
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 3.3e-06 55.8 87 43.7
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 5.7e-06 55.1 66 48.5
PSO384G3916 Papaver somniferum HOM05D006872 ORTHO05D006261 5.7e-06 55.1 67 52.2
SalBow1G1487 Salvia bowleyana HOM05D001517 ORTHO05D001424 5.7e-06 55.1 42 59.5
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 7.4e-06 54.7 85 43.5
Thecc.09G276100 Theobroma cacao HOM05D006872 ORTHO05D006261 7.4e-06 54.7 65 50.8
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 9.7e-06 54.3 75 49.3
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 9.7e-06 54.3 64 46.9
SalBow1G5428 Salvia bowleyana HOM05D006872 ORTHO05D006261 9.7e-06 54.3 42 59.5
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 9.7e-06 54.3 75 40.0


User provided reference genes

Program Settings