Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 7.9e-67 256.9 125 100.0
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.1e-23 113.6 58 98.3
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 6.6e-21 104.4 81 67.9
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.5e-20 103.2 58 87.9
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 1.5e-20 103.2 60 85.0
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 4.3e-20 101.7 58 86.2
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 4.3e-20 101.7 81 61.7
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 5.6e-20 101.3 76 68.4
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 7.3e-20 100.9 58 86.2
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 7.3e-20 100.9 81 64.2
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 9.5e-20 100.5 60 80.0
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.2e-19 100.1 64 76.6
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.6e-19 99.8 60 81.7
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.6e-19 99.8 60 81.7
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.6e-19 99.8 60 81.7
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 2.1e-19 99.4 64 76.6
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 2.8e-19 99.0 64 75.0
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 2.8e-19 99.0 64 75.0
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 2.8e-19 99.0 58 82.8
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 3.6e-19 98.6 64 73.4
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 4.7e-19 98.2 60 83.3
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 4.7e-19 98.2 65 73.8
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 6.2e-19 97.8 81 61.7
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 6.2e-19 97.8 58 82.8
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 6.2e-19 97.8 58 81.0
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 8.0e-19 97.4 60 78.3
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 8.0e-19 97.4 60 78.3
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.4e-18 96.7 85 57.6
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.8e-18 96.3 64 71.9
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 1.8e-18 96.3 64 70.3
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.8e-18 96.3 58 79.3
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.8e-18 96.3 58 81.0
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 2.3e-18 95.9 79 62.0
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 3.1e-18 95.5 60 80.0
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.1e-18 95.5 60 80.0
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 3.1e-18 95.5 60 75.0
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 4.0e-18 95.1 58 77.6
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 5.2e-18 94.7 58 77.6
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 5.2e-18 94.7 57 77.2
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 6.8e-18 94.4 58 77.6
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 6.8e-18 94.4 65 67.7
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 6.8e-18 94.4 57 77.2
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 6.8e-18 94.4 64 71.9
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 8.9e-18 94.0 65 67.7
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 8.9e-18 94.0 65 67.7
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 8.9e-18 94.0 64 70.3
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 8.9e-18 94.0 60 78.3
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-17 93.6 60 78.3
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.2e-17 93.6 60 78.3
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.2e-17 93.6 60 76.7
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.5e-17 93.2 65 66.2
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.5e-17 93.2 58 77.6
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 1.5e-17 93.2 67 65.7
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.5e-17 93.2 60 78.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.5e-17 93.2 60 76.7
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 2.0e-17 92.8 63 71.4
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.0e-17 92.8 65 67.7
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.0e-17 92.8 65 67.7
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 2.0e-17 92.8 57 77.2
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 2.0e-17 92.8 81 58.0
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 2.0e-17 92.8 65 66.2
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.0e-17 92.8 57 73.7
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 2.6e-17 92.4 64 68.8
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.6e-17 92.4 57 75.4
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 2.6e-17 92.4 58 75.9
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 2.6e-17 92.4 58 74.1
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 3.4e-17 92.0 58 72.4
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 3.4e-17 92.0 58 74.1
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 3.4e-17 92.0 73 63.0
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 4.4e-17 91.7 57 75.4
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 4.4e-17 91.7 58 75.9
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 4.4e-17 91.7 58 75.9
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 9.8e-17 90.5 56 76.8
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 9.8e-17 90.5 65 63.1
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 9.8e-17 90.5 58 75.9
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 9.8e-17 90.5 57 73.7
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.3e-16 90.1 57 75.4
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.7e-16 89.7 59 76.3
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.7e-16 89.7 64 67.2
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.2e-16 89.4 65 63.1
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.2e-16 89.4 65 63.1
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 2.9e-16 89.0 65 63.1
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 2.9e-16 89.0 65 63.1
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 2.9e-16 89.0 65 63.1
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.9e-16 89.0 57 73.7
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.7e-16 88.6 56 75.0
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.7e-16 88.6 56 75.0
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 3.7e-16 88.6 58 70.7
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 3.7e-16 88.6 64 64.1
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 6.4e-16 87.8 62 67.7
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 6.4e-16 87.8 57 71.9
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 8.3e-16 87.4 57 71.9
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.1e-15 87.0 58 67.2
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.4e-15 86.7 57 70.2
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 3.2e-15 85.5 57 71.9
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 4.1e-15 85.1 57 68.4
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 2.1e-14 82.8 55 70.9
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.2e-11 73.6 70 57.1
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.6e-11 72.0 58 53.4
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 1.1e-10 70.5 64 54.7
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.8e-10 69.7 56 55.4
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 5.8e-09 64.7 58 50.0
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 9.9e-09 63.9 58 62.1
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 3.2e-07 58.9 37 81.1


User provided reference genes

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