Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4243 Ceratophyllum demersum HOM05D006469 ORTHO05D008034 1.0e-142 510.0 247 100.0
Dinv33650 Davidia involucrata HOM05D006469 ORTHO05D008034 1.3e-57 227.3 216 52.3
TAR376G0066 Trochodendron aralioides HOM05D006469 ORTHO05D008034 7.3e-56 221.5 216 52.3
Lj4A220G94 Lonicera japonica HOM05D006469 ORTHO05D008034 2.8e-55 219.5 208 52.9
Sopen03g006220 Solanum pennellii HOM05D006469 ORTHO05D008034 5.2e-54 215.3 214 50.5
Solyc03g033470.3 Solanum lycopersicum HOM05D006469 ORTHO05D008034 6.8e-54 214.9 207 51.7
GSVIVG01018765001 Vitis vinifera HOM05D006469 ORTHO05D008034 1.2e-53 214.2 207 51.7
Thecc.01G016800 Theobroma cacao HOM05D006469 ORTHO05D008034 1.5e-53 213.8 211 51.2
Lsat_1_v5_gn_2_76041 Lactuca sativa HOM05D006469 ORTHO05D008034 2.0e-53 213.4 215 53.0
Thhalv10025786m.g Eutrema salsugineum HOM05D006469 ORTHO05D008034 2.6e-53 213.0 207 52.7
Gohir.A02G171200 Gossypium hirsutum HOM05D006469 ORTHO05D008034 5.8e-53 211.8 221 49.3
Sc07g0001050 Simmondsia chinensis HOM05D006469 ORTHO05D008034 1.3e-52 210.7 217 51.2
PSO170G4882 Papaver somniferum HOM05D006469 ORTHO05D008034 2.2e-52 209.9 231 49.4
Glyma.02G047300 Glycine max HOM05D006469 ORTHO05D008034 2.9e-52 209.5 221 49.8
Manes.02G105600 Manihot esculenta HOM05D006469 ORTHO05D008034 3.7e-52 209.1 224 48.7
CAN.G1817.1 Capsicum annuum HOM05D006469 ORTHO05D008034 4.9e-52 208.8 217 48.4
AT4G35987 Arabidopsis thaliana HOM05D006469 ORTHO05D008034 6.4e-52 208.4 212 51.9
Sp7g33770 Schrenkiella parvula HOM05D006469 ORTHO05D008034 8.4e-52 208.0 212 51.9
C01p03020 Brassica napus HOM05D006469 ORTHO05D008034 1.1e-51 207.6 213 52.6
BcaNung00773 Brassica carinata HOM05D006469 ORTHO05D008034 1.4e-51 207.2 217 52.1
Gorai.003G009100 Gossypium raimondii HOM05D006469 ORTHO05D008034 1.4e-51 207.2 222 49.1
Medtr8g075480 Medicago truncatula HOM05D006469 ORTHO05D008034 1.4e-51 207.2 227 48.0
Nn6g32040 Nelumbo nucifera HOM05D006469 ORTHO05D008034 1.4e-51 207.2 221 50.2
A01p02720 Brassica napus HOM05D006469 ORTHO05D008034 2.4e-51 206.5 216 50.5
BolC1t00288H Brassica oleracea HOM05D006469 ORTHO05D008034 2.4e-51 206.5 213 52.1
PGSC0003DMG402022530 Solanum tuberosum HOM05D006469 ORTHO05D008034 2.4e-51 206.5 214 47.7
CARHR244380 Cardamine hirsuta HOM05D006469 ORTHO05D008034 3.2e-51 206.1 213 49.8
TPR.G24083 Trifolium pratense HOM05D006469 ORTHO05D008034 3.2e-51 206.1 222 48.2
Phvul.003G263600 Phaseolus vulgaris HOM05D006469 ORTHO05D008034 4.1e-51 205.7 229 46.7
Psat4g100640 Pisum sativum HOM05D006469 ORTHO05D008034 4.1e-51 205.7 221 47.5
Migut.L00672 Erythranthe guttata HOM05D006469 ORTHO05D008034 5.4e-51 205.3 211 48.8
Migut.L00699 Erythranthe guttata HOM05D006469 ORTHO05D008034 5.4e-51 205.3 211 49.3
Gohir.D03G008900 Gossypium hirsutum HOM05D006469 ORTHO05D008034 5.4e-51 205.3 222 48.6
QL06p050760 Quercus lobata HOM05D006469 ORTHO05D008034 1.2e-50 204.1 229 48.9
Haze_03751 Corylus avellana HOM05D006469 ORTHO05D008034 1.6e-50 203.8 228 46.9
CANSAT25G3476 Cannabis sativa HOM05D006469 ORTHO05D008034 2.7e-50 203.0 227 47.6
SalBow5G1778 Salvia bowleyana HOM05D006469 ORTHO05D008034 2.7e-50 203.0 210 48.6
QL06p050655 Quercus lobata HOM05D006469 ORTHO05D008034 3.5e-50 202.6 229 48.9
Carub.0007s0423 Capsella rubella HOM05D006469 ORTHO05D008034 4.6e-50 202.2 211 50.7
MELO3C007914.2 Cucumis melo HOM05D006469 ORTHO05D008034 1.0e-49 201.1 216 48.6
Lj4g0017154 Lotus japonicus HOM05D006469 ORTHO05D008034 1.3e-49 200.7 212 47.2
Aa31LG6G12960 Aethionema arabicum HOM05D006469 ORTHO05D008034 1.7e-49 200.3 208 50.0
arahy.Tifrunner.gnm1.ann1.DLPQ3A Arachis hypogaea HOM05D006469 ORTHO05D008034 1.7e-49 200.3 223 46.6
Potri.007G057000 Populus trichocarpa HOM05D006469 ORTHO05D008034 1.7e-49 200.3 218 46.8
BraA01t00258Z Brassica rapa HOM05D006469 ORTHO05D008034 2.3e-49 199.9 217 49.8
Lalb_Chr05g0229831 Lupinus albus HOM05D006469 ORTHO05D008034 2.3e-49 199.9 211 47.9
Atru.chr3.815 Acer truncatum HOM05D006469 ORTHO05D008034 5.1e-49 198.7 218 47.7
Ciclev10026134m.g Citrus clementina HOM05D006469 ORTHO05D008034 5.1e-49 198.7 212 48.6
Sabra07G0048900 Salix brachista HOM05D006469 ORTHO05D008034 5.1e-49 198.7 218 46.8
HanXRQChr04g0119941 Helianthus annuus HOM05D006469 ORTHO05D008034 1.9e-48 196.8 220 48.2
CsaV3_6G047220 Cucumis sativus L. HOM05D006469 ORTHO05D008034 2.5e-48 196.4 216 47.7
CANSAT25G3534 Cannabis sativa HOM05D006469 ORTHO05D008034 4.3e-48 195.7 226 46.0
MD02G1130100 Malus domestica HOM05D006469 ORTHO05D008034 5.6e-48 195.3 215 47.4
arahy.Tifrunner.gnm1.ann1.S7P5W6 Arachis hypogaea HOM05D006469 ORTHO05D008034 1.2e-47 194.1 223 46.2
AUR62029479 Chenopodium quinoa HOM05D006469 ORTHO05D008034 1.2e-47 194.1 211 49.8
RcHm_v2.0_Chr2g0099281 Rosa chinensis HOM05D006469 ORTHO05D008034 1.6e-47 193.7 208 47.6
CiPaw.07G059900 Carya illinoinensis HOM05D006469 ORTHO05D008034 2.8e-47 193.0 227 45.8
FvH4_1g11701 Fragaria vesca HOM05D006469 ORTHO05D008034 6.2e-47 191.8 215 47.0
Zm00001eb398850 Zea mays HOM05D006469 ORTHO05D008034 6.2e-47 191.8 228 43.0
Eucgr.I02338 Eucalyptus grandis HOM05D006469 ORTHO05D008034 8.1e-47 191.4 211 48.3
Aqoxy5G01802 Aquilegia oxysepala HOM05D006469 ORTHO05D008034 1.1e-46 191.0 215 48.4
PSO700G0153 Papaver somniferum HOM05D006469 ORTHO05D008034 1.1e-46 191.0 190 50.0
Cc07_g10870 Coffea canephora HOM05D006469 ORTHO05D008034 1.8e-46 190.3 218 48.6
Os03g0243800 Oryza sativa ssp. japonica HOM05D006469 ORTHO05D008034 1.8e-46 190.3 230 43.9
PGR102G1692 Punica granatum HOM05D006469 ORTHO05D008034 5.2e-46 188.7 217 46.5
VMungo0251G1912 Vigna mungo HOM05D006469 ORTHO05D008034 5.2e-46 188.7 259 40.5
Actinidia17434 Actinidia chinensis HOM05D006469 ORTHO05D008034 2.6e-45 186.4 222 48.2
EL10Ac6g15486 Beta vulgaris HOM05D006469 ORTHO05D008034 3.4e-45 186.0 211 48.3
TWI73G0981 Tripterygium wilfordii HOM05D006469 ORTHO05D008034 1.3e-44 184.1 232 43.1
Hma1.2p1_0258F.1_g104050 Hydrangea macrophylla HOM05D006469 ORTHO05D008034 8.4e-44 181.4 150 56.0
CSS0000310 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 1.4e-43 180.6 210 50.0
ECA238G1797 Erigeron canadensis HOM05D006469 ORTHO05D008034 1.4e-43 180.6 233 42.5
FAN19G1692 Fragaria x ananassa HOM05D006469 ORTHO05D008034 1.9e-43 180.3 233 42.5
MSTRG.3610 Avicennia marina HOM05D006469 ORTHO05D008034 4.2e-43 179.1 211 45.5
CSS0021178 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 1.6e-42 177.2 210 49.0
FAN26G2561 Fragaria x ananassa HOM05D006469 ORTHO05D008034 2.1e-42 176.8 191 47.6
Cfa006983 Carpinus fangiana HOM05D006469 ORTHO05D008034 3.5e-42 176.0 221 43.4
QL11p035074 Quercus lobata HOM05D006469 ORTHO05D008034 7.8e-42 174.9 285 39.3
Pp3c16_25190 Physcomitrium patens HOM05D006469 ORTHO05D008034 6.2e-39 165.2 217 40.1
Prupe.7G169600 Prunus persica HOM05D006469 ORTHO05D008034 1.8e-38 163.7 169 48.5
MBI05_g33508_MAGBIO Magnolia biondii HOM05D006469 ORTHO05D008034 4.0e-38 162.5 129 58.9
Ah.03g148920 Amaranthus hybridus HOM05D006469 ORTHO05D008034 9.0e-38 161.4 173 48.6
Nitab4.5_0003548g0050 Nicotiana tabacum HOM05D006469 ORTHO05D008034 2.0e-37 160.2 181 43.6
Cpa.g.sc6.265 Carica papaya HOM05D006469 ORTHO05D008034 2.6e-37 159.8 177 45.2
THA.LOC104807502 Tarenaya hassleriana HOM05D006469 ORTHO05D008034 2.2e-36 156.8 135 54.8
unitig_46.g18721 Utricularia gibba HOM05D006469 ORTHO05D008034 2.9e-36 156.4 193 43.0
SGA_v2.0_scaffold45G17085 Striga asiatica HOM05D006469 ORTHO05D008034 6.4e-36 155.2 133 51.9
FAN23G0491 Fragaria x ananassa HOM05D000153 ORTHO05D000118 1.4e-35 154.1 248 36.7
Hund14051 Selenicereus undatus HOM05D006469 ORTHO05D008034 1.4e-35 154.1 187 43.9
Mapoly0087s0053 Marchantia polymorpha HOM05D006469 ORTHO05D008034 4.2e-35 152.5 218 36.7
AUR62003357 Chenopodium quinoa HOM05D006469 ORTHO05D008034 5.4e-35 152.1 129 55.8
Nitab4.5_0000864g0140 Nicotiana tabacum HOM05D006469 ORTHO05D008034 5.4e-35 152.1 242 40.1
Sed0020941 Sechium edule HOM05D006469 ORTHO05D008034 2.1e-34 150.2 126 56.3
ATR0810G135 Amborella trichopoda HOM05D006469 ORTHO05D008034 1.3e-33 147.5 176 46.6
Actinidia22967 Actinidia chinensis HOM05D006469 ORTHO05D008034 6.6e-33 145.2 182 44.5
Oeu005141.2 Olea europaea HOM05D006469 ORTHO05D008034 6.6e-33 145.2 226 42.0
ClCG01G020380 Citrullus lanatus HOM05D000348 ORTHO05D000244 6.2e-31 138.7 206 40.3
BcaC04g20386 Brassica carinata HOM05D006469 ORTHO05D008034 3.4e-29 132.9 236 38.6
BcaC04g20390 Brassica carinata HOM05D006469 ORTHO05D008034 3.4e-29 132.9 236 38.6
Nitab4.5_0008011g0040 Nicotiana tabacum HOM05D006469 ORTHO05D008034 4.5e-29 132.5 250 36.4
C09p44210 Brassica napus HOM05D006469 ORTHO05D008034 4.9e-28 129.0 246 37.0
Hma1.2p1_0258F.1_g104040 Hydrangea macrophylla HOM05D006469 ORTHO05D008034 1.9e-27 127.1 103 59.2
BolC9t57293H Brassica oleracea HOM05D006469 ORTHO05D008034 6.7e-25 118.6 213 39.0
Ca_22385_v3 Cicer arietinum L. HOM05D006469 ORTHO05D008034 2.1e-23 113.6 111 52.3
BcaC03g14989 Brassica carinata HOM05D006469 ORTHO05D008034 1.5e-21 107.5 172 40.7
DCAR_021507 Daucus carota HOM05D006469 ORTHO05D008034 4.5e-21 105.9 209 33.0
Peaxi162Scf00328g00828 Petunia axillaris HOM05D006469 ORTHO05D008034 4.5e-21 105.9 235 29.8
Sabra05G0092400 Salix brachista HOM05D006469 ORTHO05D008034 2.9e-20 103.2 181 34.8
Duzib147G1015 Durio zibethinus HOM05D006469 ORTHO05D008034 9.3e-19 98.2 223 31.4
SMO361G0665 Selaginella moellendorffii HOM05D006469 ORTHO05D008034 3.0e-17 93.2 111 42.3
CDE02G4028 Ceratophyllum demersum HOM05D006469 ORTHO05D008034 5.7e-16 89.0 43 95.3
Manes.01G147000 Manihot esculenta HOM05D006469 ORTHO05D008034 7.4e-16 88.6 103 48.5
HPP92_022639 Vanilla planifolia HOM05D006469 ORTHO05D008034 2.3e-09 67.0 91 41.8
BolC2t08600H Brassica oleracea HOM05D006469 ORTHO05D008034 1.9e-08 63.9 131 35.1
COL.COLO4_22441 Corchorus olitorius HOM05D006469 ORTHO05D008034 2.2e-07 60.5 81 44.4
Nitab4.5_0000438g0170 Nicotiana tabacum HOM05D006469 ORTHO05D008034 1.8e-06 57.4 82 40.2


User provided reference genes

Program Settings