Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4223 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 3.0e-75 285.0 140 100.0
CDE02G4463 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 4.9e-17 91.7 56 82.1
TAR626G0344 Trochodendron aralioides HOM05D006189 ORTHO05D007765 7.4e-13 77.8 56 64.3
CSS0031891 Camellia sinensis var. sinensis HOM05D006189 ORTHO05D007765 2.1e-12 76.3 56 62.5
GSVIVG01021771001 Vitis vinifera HOM05D006189 ORTHO05D007765 2.1e-12 76.3 56 64.3
Sabra11G0142800 Salix brachista HOM05D006189 ORTHO05D007765 4.8e-12 75.1 52 65.4
COL.COLO4_26883 Corchorus olitorius HOM05D006189 ORTHO05D007765 8.2e-12 74.3 56 62.5
Actinidia29243 Actinidia chinensis HOM05D006189 ORTHO05D007765 1.1e-11 73.9 56 60.7
CiPaw.09G147800 Carya illinoinensis HOM05D006189 ORTHO05D007765 1.1e-11 73.9 56 62.5
Atru.chr10.686 Acer truncatum HOM05D006189 ORTHO05D007765 1.4e-11 73.6 56 60.7
Rhsim13G0125300 Rhododendron simsii HOM05D006189 ORTHO05D007765 1.4e-11 73.6 56 60.7
Thecc.06G008600 Theobroma cacao HOM05D006189 ORTHO05D007765 1.4e-11 73.6 52 67.3
MBI18_g27139_MAGBIO Magnolia biondii HOM05D006189 ORTHO05D007765 1.8e-11 73.2 56 60.7
QL04p073052 Quercus lobata HOM05D006189 ORTHO05D007765 1.8e-11 73.2 56 62.5
Cfa000769 Carpinus fangiana HOM05D006189 ORTHO05D007765 2.4e-11 72.8 56 58.9
Haze_05946 Corylus avellana HOM05D006189 ORTHO05D007765 2.4e-11 72.8 56 58.9
Potri.011G157300 Populus trichocarpa HOM05D006189 ORTHO05D007765 2.4e-11 72.8 52 63.5
Duzib235G1073 Durio zibethinus HOM05D006189 ORTHO05D007765 3.1e-11 72.4 56 60.7
arahy.Tifrunner.gnm1.ann1.5RXD5Y Arachis hypogaea HOM05D006189 ORTHO05D007765 4.1e-11 72.0 56 57.1
PSO541G1785 Papaver somniferum HOM05D006189 ORTHO05D007765 4.1e-11 72.0 52 65.4
Manes.14G126200 Manihot esculenta HOM05D006189 ORTHO05D007765 5.3e-11 71.6 52 65.4
arahy.Tifrunner.gnm1.ann1.4Q5DUA Arachis hypogaea HOM05D006189 ORTHO05D007765 6.9e-11 71.2 56 58.9
Ciclev10016184m.g Citrus clementina HOM05D006189 ORTHO05D007765 6.9e-11 71.2 56 58.9
arahy.Tifrunner.gnm1.ann1.FHXA43 Arachis hypogaea HOM05D006189 ORTHO05D007765 9.0e-11 70.9 56 57.1
Cpa.g.c30210.1 Carica papaya HOM05D006189 ORTHO05D007765 9.0e-11 70.9 65 56.9
TWI38G1238 Tripterygium wilfordii HOM05D006189 ORTHO05D007765 9.0e-11 70.9 56 58.9
vmacro03465 Vaccinium macrocarpon HOM05D006189 ORTHO05D007765 9.0e-11 70.9 52 63.5
Hma1.2p1_1192F.1_g265520 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 1.2e-10 70.5 56 60.7
Lj6g0027485 Lotus japonicus HOM05D006189 ORTHO05D007765 1.2e-10 70.5 52 59.6
Dinv06442 Davidia involucrata HOM05D006189 ORTHO05D007765 1.5e-10 70.1 56 58.9
Medtr2g031990 Medicago truncatula HOM05D006189 ORTHO05D007765 2.0e-10 69.7 52 59.6
Solyc02g023990.3 Solanum lycopersicum HOM05D006189 ORTHO05D007765 2.0e-10 69.7 86 45.3
Sopen02g006700 Solanum pennellii HOM05D006189 ORTHO05D007765 2.0e-10 69.7 86 45.3
PGSC0003DMG400028033 Solanum tuberosum HOM05D006189 ORTHO05D007765 2.0e-10 69.7 90 42.2
ECA234G0756 Erigeron canadensis HOM05D006189 ORTHO05D007765 2.6e-10 69.3 52 61.5
Sed0000978 Sechium edule HOM05D006189 ORTHO05D007765 3.4e-10 68.9 54 61.1
ClCG03G008560 Citrullus lanatus HOM05D006189 ORTHO05D007765 4.5e-10 68.6 54 57.4
Ah.14g085060 Amaranthus hybridus HOM05D006189 ORTHO05D007765 5.9e-10 68.2 56 55.4
arahy.Tifrunner.gnm1.ann1.HZ123V Arachis hypogaea HOM05D006189 ORTHO05D007765 5.9e-10 68.2 56 55.4
PSO675G7004 Papaver somniferum HOM05D006189 ORTHO05D007765 5.9e-10 68.2 52 61.5
Phvul.006G123300 Phaseolus vulgaris HOM05D006189 ORTHO05D007765 5.9e-10 68.2 52 59.6
MSTRG.16306 Avicennia marina HOM05D006189 ORTHO05D007765 7.6e-10 67.8 50 62.0
Migut.M01928 Erythranthe guttata HOM05D006189 ORTHO05D007765 7.6e-10 67.8 52 57.7
Nn7g37778 Nelumbo nucifera HOM05D006189 ORTHO05D007765 7.6e-10 67.8 52 61.5
Ca_00927_v3 Cicer arietinum L. HOM05D006189 ORTHO05D007765 1.0e-09 67.4 52 57.7
Glyma.09G029700 Glycine max HOM05D006189 ORTHO05D007765 1.0e-09 67.4 52 59.6
TPR.G8020 Trifolium pratense HOM05D006189 ORTHO05D007765 1.0e-09 67.4 52 57.7
VMungo0540G1817 Vigna mungo HOM05D006189 ORTHO05D007765 1.0e-09 67.4 52 59.6
Glyma.15G135500 Glycine max HOM05D006189 ORTHO05D007765 1.3e-09 67.0 52 57.7
CsaV3_1G037630 Cucumis sativus L. HOM05D006189 ORTHO05D007765 1.7e-09 66.6 56 57.1
Gohir.A03G088500 Gossypium hirsutum HOM05D006189 ORTHO05D007765 1.7e-09 66.6 52 61.5
Gohir.D02G105200 Gossypium hirsutum HOM05D006189 ORTHO05D007765 2.2e-09 66.2 52 61.5
Lsat_1_v5_gn_5_148401 Lactuca sativa HOM05D006189 ORTHO05D007765 2.2e-09 66.2 56 55.4
Oeu063153.2 Olea europaea HOM05D006189 ORTHO05D007765 2.2e-09 66.2 50 60.0
HanXRQChr10g0296271 Helianthus annuus HOM05D006189 ORTHO05D007765 2.9e-09 65.9 52 55.8
SGA_v2.0_scaffold1G00293 Striga asiatica HOM05D006189 ORTHO05D007765 2.9e-09 65.9 50 58.0
DCAR_005641 Daucus carota HOM05D006189 ORTHO05D007765 3.8e-09 65.5 52 59.6
SalBow8G0058 Salvia bowleyana HOM05D006189 ORTHO05D007765 3.8e-09 65.5 50 62.0
SalBow8G0354 Salvia bowleyana HOM05D006189 ORTHO05D007765 3.8e-09 65.5 50 62.0
Eucgr.D01017 Eucalyptus grandis HOM05D006189 ORTHO05D007765 5.0e-09 65.1 56 55.4
Lalb_Chr18g0058331 Lupinus albus HOM05D006189 ORTHO05D007765 5.0e-09 65.1 52 57.7
MELO3C002872.2 Cucumis melo HOM05D006189 ORTHO05D007765 6.5e-09 64.7 56 55.4
Gorai.005G119400 Gossypium raimondii HOM05D006189 ORTHO05D007765 8.5e-09 64.3 52 59.6
Nitab4.5_0002819g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 8.5e-09 64.3 56 50.0
Nitab4.5_0010673g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 1.1e-08 63.9 56 50.0
Peaxi162Scf00395g00112 Petunia axillaris HOM05D006189 ORTHO05D007765 1.1e-08 63.9 56 50.0
CANSAT35G1316 Cannabis sativa HOM05D006189 ORTHO05D007765 1.9e-08 63.2 56 51.8
PSO541G6221 Papaver somniferum HOM05D006189 ORTHO05D007765 2.5e-08 62.8 52 59.6
EL10Ac9g22332 Beta vulgaris HOM05D006189 ORTHO05D007765 3.2e-08 62.4 52 51.9
CAN.G565.1 Capsicum annuum HOM05D006189 ORTHO05D007765 3.2e-08 62.4 56 48.2
Lj2A337T31 Lonicera japonica HOM05D006189 ORTHO05D007765 4.2e-08 62.0 52 48.1
Sc24g0002570 Simmondsia chinensis HOM05D006189 ORTHO05D007765 4.2e-08 62.0 50 56.0
TPR.G8023 Trifolium pratense HOM05D006189 ORTHO05D007765 4.2e-08 62.0 50 58.0
AUR62030247 Chenopodium quinoa HOM05D006189 ORTHO05D007765 7.2e-08 61.2 56 50.0
FvH4_3g11150 Fragaria vesca HOM05D006189 ORTHO05D007765 7.2e-08 61.2 56 55.4
FAN16G1953 Fragaria x ananassa HOM05D006189 ORTHO05D007765 7.2e-08 61.2 56 55.4
FAN21G1916 Fragaria x ananassa HOM05D006189 ORTHO05D007765 7.2e-08 61.2 56 55.4
AUR62027598 Chenopodium quinoa HOM05D006189 ORTHO05D007765 9.3e-08 60.8 56 48.2
Prupe.4G101000 Prunus persica HOM05D006189 ORTHO05D007765 9.3e-08 60.8 56 55.4
Cc09_g07340 Coffea canephora HOM05D006189 ORTHO05D007765 1.2e-07 60.5 50 52.0
Aa31LG6G2850 Aethionema arabicum HOM05D006189 ORTHO05D007765 1.6e-07 60.1 52 53.8
HPP92_015692 Vanilla planifolia HOM05D006189 ORTHO05D007765 1.6e-07 60.1 56 50.0
FAN25G1707 Fragaria x ananassa HOM05D006189 ORTHO05D007765 2.1e-07 59.7 56 53.6
RcHm_v2.0_Chr5g0018051 Rosa chinensis HOM05D006189 ORTHO05D007765 2.1e-07 59.7 56 53.6
MD10G1243100 Malus domestica HOM05D006189 ORTHO05D007765 2.7e-07 59.3 56 53.6
ATR0763G139 Amborella trichopoda HOM05D006189 ORTHO05D007765 7.9e-07 57.8 54 50.0
BcaNung04155 Brassica carinata HOM05D006189 ORTHO05D007765 3.0e-06 55.8 52 50.0
Mapoly0158s0008 Marchantia polymorpha HOM05D006189 ORTHO05D007765 3.0e-06 55.8 71 39.4
Carub.0007s2069 Capsella rubella HOM05D006189 ORTHO05D007765 3.9e-06 55.5 52 50.0
Thhalv10025851m.g Eutrema salsugineum HOM05D006189 ORTHO05D007765 5.1e-06 55.1 52 50.0
C01p14490 Brassica napus HOM05D006189 ORTHO05D007765 6.7e-06 54.7 52 48.1
BolC1t01404H Brassica oleracea HOM05D006189 ORTHO05D007765 6.7e-06 54.7 52 48.1
BraA01t01159Z Brassica rapa HOM05D006189 ORTHO05D007765 6.7e-06 54.7 52 48.1


User provided reference genes

Program Settings