Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 0.0e+00 1567.0 823 100.0
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.1e-269 932.6 709 69.1
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 3.2e-265 918.7 747 64.9
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 1.5e-259 899.8 717 64.9
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 3.4e-259 898.7 717 64.7
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 3.4e-259 898.7 738 62.1
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.5e-259 898.3 729 63.6
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.0e-258 897.1 725 63.4
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.0e-258 897.1 725 63.4
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 4.9e-258 894.8 752 61.4
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 1.9e-257 892.9 774 60.2
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 2.5e-257 892.5 736 62.0
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 7.1e-257 891.0 551 73.7
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 3.5e-256 888.6 740 62.6
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 7.9e-256 887.5 722 65.4
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 1.5e-254 883.2 729 62.0
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 3.3e-254 882.1 742 60.2
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 7.4e-254 880.9 737 61.6
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 9.6e-254 880.6 761 60.4
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 1.6e-253 879.8 674 65.9
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 4.8e-253 878.2 782 58.2
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 3.1e-252 875.5 564 71.1
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 9.0e-252 874.0 528 74.6
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.2e-251 873.6 528 74.8
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 2.0e-251 872.8 528 74.6
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.2e-250 869.4 528 74.2
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 2.9e-250 869.0 767 58.9
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 5.0e-250 868.2 783 60.0
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.1e-249 867.1 742 61.1
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.1e-249 867.1 787 59.6
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.9e-249 866.3 779 58.3
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 7.2e-249 864.4 783 58.2
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 6.1e-248 861.3 532 72.4
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 1.1e-246 857.1 801 57.1
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 1.5e-246 856.7 534 72.7
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 7.4e-246 854.4 800 56.9
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.1e-244 850.5 534 72.7
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.1e-244 850.5 754 57.8
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 2.4e-244 849.4 546 70.7
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 9.0e-244 847.4 568 69.0
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 1.5e-243 846.7 533 72.0
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.5e-243 846.7 533 72.0
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 2.6e-243 845.9 540 71.3
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.4e-243 845.5 567 68.8
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 4.5e-243 845.1 540 70.7
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 5.9e-243 844.7 567 68.4
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 5.9e-243 844.7 567 68.4
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 1.7e-242 843.2 737 58.2
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 2.2e-242 842.8 535 71.0
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 8.5e-242 840.9 534 70.8
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 2.5e-241 839.3 535 70.7
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 7.2e-241 837.8 748 59.0
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 2.0e-238 829.7 567 67.0
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 3.3e-238 828.9 738 60.0
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 2.2e-237 826.2 573 67.2
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 2.4e-236 822.8 532 70.3
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 5.3e-236 821.6 743 58.4
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 6.9e-236 821.2 540 69.8
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 3.8e-234 815.5 747 58.4
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.9e-233 813.1 784 54.2
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 1.6e-232 810.1 529 69.8
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 2.7e-232 809.3 720 59.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 1.4e-231 807.0 720 56.7
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 2.3e-231 806.2 515 71.3
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 2.3e-231 806.2 678 61.4
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 5.7e-230 801.6 538 68.6
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 1.7e-226 790.0 771 54.7
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 2.9e-226 789.3 759 55.6
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 7.2e-225 784.6 538 66.4
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 5.2e-223 778.5 535 66.2
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 4.4e-222 775.4 540 66.5
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 2.8e-221 772.7 533 65.3
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 3.1e-220 769.2 705 58.6
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 7.7e-219 764.6 535 64.9
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 3.8e-218 762.3 706 56.4
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 2.5e-217 759.6 533 64.9
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 2.5e-217 759.6 526 66.0
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.2e-217 758.8 806 52.9
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 1.2e-216 757.3 535 64.1
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 6.1e-216 755.0 535 63.9
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 1.4e-215 753.8 530 63.0
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 1.8e-215 753.4 529 64.3
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 5.7e-206 721.8 713 55.7
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.2e-203 714.1 773 51.2
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.0e-203 713.4 577 59.3
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 3.1e-191 672.9 712 50.3
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 1.2e-168 597.8 564 58.7
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 4.2e-164 582.8 557 56.2
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 4.0e-159 566.2 456 59.2
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.8e-157 559.7 334 75.1
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 1.5e-150 537.7 574 47.6
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 9.9e-150 535.0 745 44.2
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 3.2e-148 530.0 378 65.9
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.1e-139 500.7 577 48.7
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.3e-136 491.5 328 68.6
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 1.6e-136 491.1 481 57.8
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.4e-132 478.0 291 74.2
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.7e-129 466.1 282 75.2
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.4e-119 434.1 397 55.2
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 5.3e-111 406.4 346 55.5
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 2.3e-90 337.8 187 80.7
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 4.5e-86 323.6 196 75.5
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 5.6e-84 316.6 336 48.5
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 8.6e-77 292.7 439 47.6
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 8.3e-72 276.2 435 42.1
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 2.0e-70 271.6 174 70.7
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 3.8e-40 171.0 307 45.3
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 6.2e-35 153.7 117 64.1
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-31 142.5 395 29.4
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.3e-29 136.0 83 73.5
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.7e-20 104.0 120 44.2
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.0e-16 93.2 76 56.6
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 1.0e-16 93.2 72 52.8
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 2.5e-07 62.0 225 33.8
HPP92_011512 Vanilla planifolia HOM05D007000 ORTHO05D428354 2.1e-06 58.9 249 32.5
Oeu040143.1 Olea europaea HOM05D007000 ORTHO05D288686 3.6e-06 58.2 62 46.8


User provided reference genes

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