Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4164 Ceratophyllum demersum HOM05D003282 ORTHO05D003637 3.9e-120 434.9 232 100.0
CDE04G1299 Ceratophyllum demersum HOM05D003282 ORTHO05D003637 4.2e-53 212.2 159 74.8
Glyma.14G089021 Glycine max HOM05D003282 ORTHO05D003637 1.0e-11 74.7 100 40.0
Lalb_Chr22g0355661 Lupinus albus HOM05D003282 ORTHO05D003637 1.0e-11 74.7 144 32.6
CANSAT25G2311 Cannabis sativa HOM05D003282 ORTHO05D003637 1.5e-10 70.9 70 52.9
Lj5g0017072 Lotus japonicus HOM05D003282 ORTHO05D003637 3.3e-10 69.7 83 38.6
Solyc04g077810.1 Solanum lycopersicum HOM05D003282 ORTHO05D003637 3.3e-10 69.7 110 34.5
Glyma.04G046000 Glycine max HOM05D003282 ORTHO05D003637 5.7e-10 68.9 134 32.1
Lalb_Chr11g0062891 Lupinus albus HOM05D003282 ORTHO05D003637 5.7e-10 68.9 102 34.3
Sabra14G0009700 Salix brachista HOM05D003282 ORTHO05D003637 5.7e-10 68.9 142 30.3
Manes.18G046800 Manihot esculenta HOM05D003282 ORTHO05D003637 9.7e-10 68.2 180 34.4
Lalb_Chr14g0368171 Lupinus albus HOM05D003282 ORTHO05D003637 1.3e-09 67.8 134 35.1
Phvul.001G028100 Phaseolus vulgaris HOM05D003282 ORTHO05D003637 1.3e-09 67.8 127 36.2
Medtr1g017990 Medicago truncatula HOM05D003282 ORTHO05D003637 1.7e-09 67.4 140 35.7
arahy.Tifrunner.gnm1.ann1.L3I3WK Arachis hypogaea HOM05D003282 ORTHO05D003637 2.2e-09 67.0 75 42.7
Thecc.05G238800 Theobroma cacao HOM05D003282 ORTHO05D003637 2.2e-09 67.0 93 38.7
Haze_22432 Corylus avellana HOM05D003282 ORTHO05D003637 2.8e-09 66.6 101 43.6
TPR.G37725 Trifolium pratense HOM05D003282 ORTHO05D003637 2.8e-09 66.6 138 35.5
TAR625G1300 Trochodendron aralioides HOM05D003282 ORTHO05D003637 2.8e-09 66.6 51 54.9
Cfa013774 Carpinus fangiana HOM05D003282 ORTHO05D003637 3.7e-09 66.2 83 47.0
Sopen04g031410 Solanum pennellii HOM05D003282 ORTHO05D003637 3.7e-09 66.2 111 33.3
TWI56G0432 Tripterygium wilfordii HOM05D003282 ORTHO05D003637 3.7e-09 66.2 59 50.8
VMungo0647G2568 Vigna mungo HOM05D003282 ORTHO05D003637 3.7e-09 66.2 140 35.0
CiPaw.07G174500 Carya illinoinensis HOM05D003282 ORTHO05D003637 4.8e-09 65.9 136 35.3
Oeu037484.1 Olea europaea HOM05D003282 ORTHO05D003637 6.3e-09 65.5 59 55.9
Manes.05G182200 Manihot esculenta HOM05D003282 ORTHO05D003637 8.2e-09 65.1 128 34.4
Cpa.g.sc142.29 Carica papaya HOM05D003282 ORTHO05D003637 1.1e-08 64.7 121 36.4
Glyma.17G234800 Glycine max HOM05D003282 ORTHO05D003637 1.4e-08 64.3 85 43.5
Oeu038172.1 Olea europaea HOM05D003282 ORTHO05D003637 1.4e-08 64.3 75 44.0
Psat5g038040 Pisum sativum HOM05D003282 ORTHO05D003637 1.8e-08 63.9 135 29.6
THA.LOC104819897 Tarenaya hassleriana HOM05D003282 ORTHO05D003637 3.1e-08 63.2 69 43.5
CiPaw.08G050400 Carya illinoinensis HOM05D003282 ORTHO05D003637 4.1e-08 62.8 162 35.2
HanXRQChr05g0150961 Helianthus annuus HOM05D003282 ORTHO05D003637 4.1e-08 62.8 68 42.6
VMungo0464G1205 Vigna mungo HOM05D003282 ORTHO05D003637 4.1e-08 62.8 97 32.0
Glyma.06G046800 Glycine max HOM05D003282 ORTHO05D003637 5.3e-08 62.4 154 31.8
Nn1g04545 Nelumbo nucifera HOM05D003282 ORTHO05D003637 5.3e-08 62.4 67 46.3
Peaxi162Scf00551g00011 Petunia axillaris HOM05D003282 ORTHO05D003637 5.3e-08 62.4 85 38.8
Psat6g018120 Pisum sativum HOM05D003282 ORTHO05D003637 5.3e-08 62.4 134 32.1
TWI12G0431 Tripterygium wilfordii HOM05D003282 ORTHO05D003637 5.3e-08 62.4 51 52.9
Thecc.08G088400 Theobroma cacao HOM05D003282 ORTHO05D003637 7.0e-08 62.0 60 45.0
Atru.chr13.836 Acer truncatum HOM05D003282 ORTHO05D003637 9.1e-08 61.6 131 36.6
PGSC0003DMG400010618 Solanum tuberosum HOM05D003282 ORTHO05D003637 9.1e-08 61.6 147 32.7
FvH4_2g33050 Fragaria vesca HOM05D003282 ORTHO05D003637 1.2e-07 61.2 62 50.0
FAN24G0457 Fragaria x ananassa HOM05D003282 ORTHO05D003637 1.2e-07 61.2 62 50.0
Lsat_1_v5_gn_6_110941 Lactuca sativa HOM05D003282 ORTHO05D003637 1.2e-07 61.2 69 40.6
arahy.Tifrunner.gnm1.ann1.TP4UKQ Arachis hypogaea HOM05D003282 ORTHO05D003637 1.5e-07 60.8 116 33.6
Sed0008207 Sechium edule HOM05D003282 ORTHO05D003637 1.5e-07 60.8 79 45.6
Nitab4.5_0002484g0080 Nicotiana tabacum HOM05D003282 ORTHO05D003637 2.0e-07 60.5 146 30.8
Potri.014G015800 Populus trichocarpa HOM05D003282 ORTHO05D003637 2.0e-07 60.5 179 29.6
Lj1g0007382 Lotus japonicus HOM05D003282 ORTHO05D003637 2.6e-07 60.1 149 30.9
MELO3C016821.2 Cucumis melo HOM05D003282 ORTHO05D003637 3.4e-07 59.7 64 42.2
FAN20G2529 Fragaria x ananassa HOM05D003282 ORTHO05D003637 3.4e-07 59.7 53 52.8
FAN27G3264 Fragaria x ananassa HOM05D003282 ORTHO05D003637 3.4e-07 59.7 53 52.8
Phvul.009G072000 Phaseolus vulgaris HOM05D003282 ORTHO05D003637 3.4e-07 59.7 126 30.2
Ah.05g167090 Amaranthus hybridus HOM05D003282 ORTHO05D003637 4.5e-07 59.3 91 36.3
MBI16_g23892_MAGBIO Magnolia biondii HOM05D003282 ORTHO05D003637 4.5e-07 59.3 85 40.0
Peaxi162Scf00081g00214 Petunia axillaris HOM05D003282 ORTHO05D003637 4.5e-07 59.3 173 29.5
QL12p038149 Quercus lobata HOM05D003282 ORTHO05D003637 5.9e-07 58.9 134 36.6
Sc02g0007910 Simmondsia chinensis HOM05D003282 ORTHO05D003637 5.9e-07 58.9 88 37.5
VMungo1309G1277 Vigna mungo HOM05D003282 ORTHO05D003637 5.9e-07 58.9 136 28.7
Nitab4.5_0000800g0090 Nicotiana tabacum HOM05D003282 ORTHO05D003637 7.7e-07 58.5 109 37.6
Prupe.1G422400 Prunus persica HOM05D003282 ORTHO05D003637 7.7e-07 58.5 145 33.8
RcHm_v2.0_Chr6g0309661 Rosa chinensis HOM05D003282 ORTHO05D003637 7.7e-07 58.5 60 48.3
FAN15G3410 Fragaria x ananassa HOM05D003282 ORTHO05D003637 1.0e-06 58.2 52 51.9
TAR381G0972 Trochodendron aralioides HOM05D003282 ORTHO05D003637 1.0e-06 58.2 118 33.1
CsaV3_4G035060 Cucumis sativus L. HOM05D003282 ORTHO05D003637 1.3e-06 57.8 63 44.4
Sabra02G0092800 Salix brachista HOM05D003282 ORTHO05D003637 1.3e-06 57.8 105 35.2
Cc10_g04990 Coffea canephora HOM05D003282 ORTHO05D003637 1.7e-06 57.4 183 30.6
Nn5g30605 Nelumbo nucifera HOM05D003282 ORTHO05D003637 1.7e-06 57.4 126 31.7
Nitab4.5_0004654g0010 Nicotiana tabacum HOM05D003282 ORTHO05D003637 1.7e-06 57.4 146 30.8
CSS0025102 Camellia sinensis var. sinensis HOM05D003282 ORTHO05D003637 2.9e-06 56.6 152 30.3
Eucgr.F02249 Eucalyptus grandis HOM05D003282 ORTHO05D003637 2.9e-06 56.6 101 33.7
THA.LOC104816757 Tarenaya hassleriana HOM05D003282 ORTHO05D003637 2.9e-06 56.6 158 26.6
DCAR_012817 Daucus carota HOM05D003282 ORTHO05D003637 3.8e-06 56.2 101 32.7
Gohir.D13G101800 Gossypium hirsutum HOM05D003282 ORTHO05D003637 3.8e-06 56.2 131 34.4
Gorai.013G114000 Gossypium raimondii HOM05D003282 ORTHO05D003637 3.8e-06 56.2 131 34.4
Lsat_1_v5_gn_1_24481 Lactuca sativa HOM05D003282 ORTHO05D003637 3.8e-06 56.2 80 36.2
CSS0044747 Camellia sinensis var. sinensis HOM05D003282 ORTHO05D003637 5.0e-06 55.8 152 29.6
COL.COLO4_07066 Corchorus olitorius HOM05D003282 ORTHO05D003637 5.0e-06 55.8 130 34.6
Migut.N02784 Erythranthe guttata HOM05D003282 ORTHO05D003637 5.0e-06 55.8 74 39.2
HanXRQChr09g0266811 Helianthus annuus HOM05D003282 ORTHO05D003637 5.0e-06 55.8 65 38.5
Nitab4.5_0002314g0080 Nicotiana tabacum HOM05D003282 ORTHO05D003637 5.0e-06 55.8 136 30.1
TPR.G33672 Trifolium pratense HOM05D003282 ORTHO05D003637 5.0e-06 55.8 145 29.0
Lj4C71T11 Lonicera japonica HOM05D003282 ORTHO05D003637 6.5e-06 55.5 135 30.4
Potri.002G118200 Populus trichocarpa HOM05D003282 ORTHO05D003637 6.5e-06 55.5 149 30.2
Aqoxy5G00861 Aquilegia oxysepala HOM05D003282 ORTHO05D003637 8.5e-06 55.1 71 36.6
Gorai.005G099300 Gossypium raimondii HOM05D003282 ORTHO05D003637 8.5e-06 55.1 175 28.6
PGR031G0890 Punica granatum HOM05D003282 ORTHO05D003637 8.5e-06 55.1 82 41.5


User provided reference genes

Program Settings