Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.4e-110 402.9 202 100.0
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 3.9e-23 112.5 424 27.8
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 8.7e-15 84.7 371 24.5
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 3.3e-14 82.8 104 45.2
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 4.3e-14 82.4 146 36.3
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 1.3e-13 80.9 116 41.4
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.8e-13 79.7 117 46.2
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 2.8e-13 79.7 123 39.0
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 8.2e-13 78.2 115 41.7
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 8.2e-13 78.2 232 29.7
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 8.2e-13 78.2 124 37.9
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.1e-12 77.8 125 36.8
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.4e-12 77.4 125 36.8
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.4e-12 77.4 123 38.2
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 3.1e-12 76.3 119 41.2
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 3.1e-12 76.3 206 32.0
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 4.1e-12 75.9 126 38.1
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 6.9e-12 75.1 143 35.7
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.9e-12 75.1 126 38.9
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.9e-12 75.1 127 38.6
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 6.9e-12 75.1 126 38.9
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 9.0e-12 74.7 125 38.4
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.2e-11 74.3 128 36.7
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 1.2e-11 74.3 119 39.5
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.2e-11 74.3 126 35.7
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.5e-11 73.9 126 36.5
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 1.5e-11 73.9 142 36.6
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 1.5e-11 73.9 214 32.7
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.5e-11 73.9 126 38.1
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.5e-11 73.9 125 36.8
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.5e-11 73.9 129 37.2
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.0e-11 73.6 142 35.2
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.6e-11 73.2 123 35.8
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 2.6e-11 73.2 127 37.0
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.6e-11 73.2 123 35.8
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 3.4e-11 72.8 123 35.8
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 3.4e-11 72.8 123 35.8
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 3.4e-11 72.8 123 35.8
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.4e-11 72.8 105 42.9
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.4e-11 72.8 144 36.1
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 4.5e-11 72.4 121 36.4
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 4.5e-11 72.4 124 38.7
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.5e-11 72.4 144 35.4
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 5.8e-11 72.0 41 82.9
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 5.8e-11 72.0 115 38.3
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 5.8e-11 72.0 126 35.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 5.8e-11 72.0 134 35.8
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 7.6e-11 71.6 123 35.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 7.6e-11 71.6 123 35.0
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 7.6e-11 71.6 143 34.3
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 7.6e-11 71.6 124 36.3
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 7.6e-11 71.6 142 35.9
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.0e-10 71.2 143 34.3
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 1.0e-10 71.2 47 68.1
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.3e-10 70.9 166 33.1
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 1.3e-10 70.9 123 35.0
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 1.3e-10 70.9 144 34.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.3e-10 70.9 144 34.0
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.3e-10 70.9 144 34.0
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 1.3e-10 70.9 50 66.0
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.3e-10 70.9 124 37.1
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 1.3e-10 70.9 144 34.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 1.3e-10 70.9 137 35.0
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.7e-10 70.5 120 35.8
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 1.7e-10 70.5 123 34.1
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.7e-10 70.5 138 34.1
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.7e-10 70.5 124 36.3
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.7e-10 70.5 124 36.3
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.7e-10 70.5 124 36.3
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.7e-10 70.5 124 36.3
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.7e-10 70.5 47 68.1
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.7e-10 70.5 47 68.1
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.7e-10 70.5 113 38.1
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.7e-10 70.5 116 37.9
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.2e-10 70.1 130 35.4
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 3.8e-10 69.3 55 60.0
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.8e-10 69.3 39 84.6
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 3.8e-10 69.3 144 33.3
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 3.8e-10 69.3 142 34.5
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 3.8e-10 69.3 125 35.2
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 3.8e-10 69.3 44 72.7
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 3.8e-10 69.3 141 34.8
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 5.0e-10 68.9 47 66.0
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 5.0e-10 68.9 144 32.6
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 5.0e-10 68.9 157 32.5
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 5.0e-10 68.9 113 37.2
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 5.0e-10 68.9 124 36.3
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 6.5e-10 68.6 51 62.7
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 6.5e-10 68.6 41 80.5
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 6.5e-10 68.6 51 62.7
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 8.4e-10 68.2 47 66.0
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 8.4e-10 68.2 142 33.8
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 8.4e-10 68.2 38 81.6
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 8.4e-10 68.2 48 62.5
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.1e-09 67.8 47 66.0
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.1e-09 67.8 111 37.8
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.4e-09 67.4 41 80.5
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.9e-09 67.0 112 37.5
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.9e-09 67.0 126 34.1
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 2.5e-09 66.6 39 79.5
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 3.2e-09 66.2 45 66.7
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 4.2e-09 65.9 47 61.7
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 5.5e-09 65.5 39 82.1
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 5.5e-09 65.5 119 37.0
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 7.1e-09 65.1 134 33.6
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.1e-09 65.1 35 80.0
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 7.1e-09 65.1 34 85.3
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 7.1e-09 65.1 160 30.6
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 7.1e-09 65.1 119 36.1
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 9.3e-09 64.7 143 32.2
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 3.5e-08 62.8 117 34.2
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 6.1e-08 62.0 108 37.0
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.9e-08 61.6 35 80.0
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 1.8e-07 60.5 38 71.1
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 3.0e-07 59.7 110 35.5
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-07 58.9 42 64.3
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 4.3e-06 55.8 32 78.1
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 9.7e-06 54.7 32 75.0


User provided reference genes

Program Settings