Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4140 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 4.9e-114 414.5 208 100.0
CDE02G1779 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 1.3e-101 373.2 208 94.2
CDE04G3720 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 8.8e-71 270.8 207 72.9
Sc08g0002890 Simmondsia chinensis HOM05D003324 ORTHO05D003957 7.1e-28 128.3 217 43.3
Medtr4g073010 Medicago truncatula HOM05D003324 ORTHO05D003957 9.2e-28 127.9 225 41.3
Nn6g31971 Nelumbo nucifera HOM05D003324 ORTHO05D003957 2.7e-27 126.3 220 40.9
TAR381G0120 Trochodendron aralioides HOM05D003324 ORTHO05D003957 2.7e-27 126.3 119 60.5
Gohir.D01G159800 Gossypium hirsutum HOM05D003324 ORTHO05D003957 6.0e-27 125.2 174 48.3
Gorai.002G198400 Gossypium raimondii HOM05D003324 ORTHO05D003957 7.8e-27 124.8 174 47.7
Hma1.2p1_0032F.1_g019360 Hydrangea macrophylla HOM05D003324 ORTHO05D003957 7.8e-27 124.8 234 39.7
Lalb_Chr03g0025201 Lupinus albus HOM05D003324 ORTHO05D003957 7.8e-27 124.8 218 41.3
Phvul.011G036200 Phaseolus vulgaris HOM05D003324 ORTHO05D003957 7.8e-27 124.8 222 42.3
PSO675G7870 Papaver somniferum HOM05D003324 ORTHO05D003957 1.0e-26 124.4 208 43.8
TAR625G0629 Trochodendron aralioides HOM05D003324 ORTHO05D003957 1.0e-26 124.4 121 58.7
CARHR243360 Cardamine hirsuta HOM05D003324 ORTHO05D003957 1.7e-26 123.6 210 42.9
Glyma.12G033600 Glycine max HOM05D003324 ORTHO05D003957 2.3e-26 123.2 215 43.7
THA.LOC104804326 Tarenaya hassleriana HOM05D003324 ORTHO05D003957 2.3e-26 123.2 118 60.2
VMungo1127G2267 Vigna mungo HOM05D003324 ORTHO05D003957 2.3e-26 123.2 226 40.7
AT4G35080 Arabidopsis thaliana HOM05D003324 ORTHO05D003957 3.0e-26 122.9 167 51.5
BolC9t54209H Brassica oleracea HOM05D003324 ORTHO05D003957 3.0e-26 122.9 176 44.9
THA.LOC104807375 Tarenaya hassleriana HOM05D003324 ORTHO05D003957 3.0e-26 122.9 118 61.0
GSVIVG01009965001 Vitis vinifera HOM05D003324 ORTHO05D003957 3.0e-26 122.9 114 60.5
CARHR107130 Cardamine hirsuta HOM05D003324 ORTHO05D003957 3.9e-26 122.5 113 61.1
Thhalv10025471m.g Eutrema salsugineum HOM05D003324 ORTHO05D003957 3.9e-26 122.5 115 60.9
AL7G16140 Arabidopsis lyrata HOM05D003324 ORTHO05D003957 5.1e-26 122.1 167 49.7
BcaNung00631 Brassica carinata HOM05D003324 ORTHO05D003957 5.1e-26 122.1 203 45.8
C01p03780 Brassica napus HOM05D003324 ORTHO05D003957 5.1e-26 122.1 203 45.8
Carub.0007s0523 Capsella rubella HOM05D003324 ORTHO05D003957 5.1e-26 122.1 116 61.2
Sp7g32850 Schrenkiella parvula HOM05D003324 ORTHO05D003957 5.1e-26 122.1 197 46.2
BcaB03g11792 Brassica carinata HOM05D003324 ORTHO05D003957 8.7e-26 121.3 117 63.2
CiPaw.05G082500 Carya illinoinensis HOM05D003324 ORTHO05D003957 8.7e-26 121.3 235 40.0
Sp3g29920 Schrenkiella parvula HOM05D003324 ORTHO05D003957 8.7e-26 121.3 118 60.2
Os06g0116400 Oryza sativa ssp. japonica HOM05D003324 ORTHO05D003957 1.1e-25 120.9 114 59.6
Cpa.g.sc37.129 Carica papaya HOM05D003324 ORTHO05D003957 1.5e-25 120.6 133 54.9
Ca_19075_v3 Cicer arietinum L. HOM05D003324 ORTHO05D003957 1.5e-25 120.6 225 40.0
MD05G1122200 Malus domestica HOM05D003324 ORTHO05D003957 1.5e-25 120.6 224 39.3
Aa31LG2G15420 Aethionema arabicum HOM05D003324 ORTHO05D003957 1.9e-25 120.2 144 52.8
BraA01t00334Z Brassica rapa HOM05D003324 ORTHO05D003957 1.9e-25 120.2 111 61.3
Gohir.A01G169000 Gossypium hirsutum HOM05D003324 ORTHO05D003957 1.9e-25 120.2 174 47.1
A01p03480 Brassica napus HOM05D003324 ORTHO05D003957 2.5e-25 119.8 115 60.0
COL.COLO4_17342 Corchorus olitorius HOM05D003324 ORTHO05D003957 3.3e-25 119.4 124 55.6
Thhalv10022725m.g Eutrema salsugineum HOM05D003324 ORTHO05D003957 3.3e-25 119.4 179 47.5
MBI08_g21302_MAGBIO Magnolia biondii HOM05D003324 ORTHO05D003957 4.3e-25 119.0 113 61.9
Psat5g001480 Pisum sativum HOM05D003324 ORTHO05D003957 4.3e-25 119.0 182 43.4
Aa31LG8G14040 Aethionema arabicum HOM05D003324 ORTHO05D003957 5.6e-25 118.6 118 56.8
AT2G16800 Arabidopsis thaliana HOM05D003324 ORTHO05D003957 5.6e-25 118.6 119 56.3
PSO541G2776 Papaver somniferum HOM05D003324 ORTHO05D003957 5.6e-25 118.6 113 61.1
Prupe.7G263700 Prunus persica HOM05D003324 ORTHO05D003957 5.6e-25 118.6 223 40.4
TPR.G39252 Trifolium pratense HOM05D003324 ORTHO05D003957 5.6e-25 118.6 226 40.3
BolC1t00370H Brassica oleracea HOM05D003324 ORTHO05D003957 7.3e-25 118.2 107 62.6
CANSAT80G2157 Cannabis sativa HOM05D003324 ORTHO05D003957 7.3e-25 118.2 236 39.4
Duzib052G0103 Durio zibethinus HOM05D003324 ORTHO05D003957 7.3e-25 118.2 124 54.8
Duzib132G0685 Durio zibethinus HOM05D003324 ORTHO05D003957 7.3e-25 118.2 112 58.9
Lj1g0008114 Lotus japonicus HOM05D003324 ORTHO05D003957 7.3e-25 118.2 116 56.0
BcaC04g23003 Brassica carinata HOM05D003324 ORTHO05D003957 9.6e-25 117.9 177 48.0
C09p13140 Brassica napus HOM05D003324 ORTHO05D003957 9.6e-25 117.9 177 48.0
CSS0032873 Camellia sinensis var. sinensis HOM05D003324 ORTHO05D003957 9.6e-25 117.9 118 57.6
Sed0007413 Sechium edule HOM05D003324 ORTHO05D003957 9.6e-25 117.9 188 48.9
BcaB07g31749 Brassica carinata HOM05D003324 ORTHO05D003957 1.2e-24 117.5 147 53.1
AL3G49540 Arabidopsis lyrata HOM05D003324 ORTHO05D003957 1.6e-24 117.1 141 51.1
Carub.0003s3062 Capsella rubella HOM05D003324 ORTHO05D003957 1.6e-24 117.1 118 56.8
HanXRQChr17g0570681 Helianthus annuus HOM05D003324 ORTHO05D003957 1.6e-24 117.1 215 40.9
Lalb_Chr01g0001931 Lupinus albus HOM05D003324 ORTHO05D003957 1.6e-24 117.1 228 39.9
Manes.04G076200 Manihot esculenta HOM05D003324 ORTHO05D003957 1.6e-24 117.1 225 40.4
Psat7g138480 Pisum sativum HOM05D003324 ORTHO05D003957 1.6e-24 117.1 220 39.5
Thecc.02G059000 Theobroma cacao HOM05D003324 ORTHO05D003957 1.6e-24 117.1 124 55.6
Atru.chr5.3322 Acer truncatum HOM05D003324 ORTHO05D003957 2.8e-24 116.3 121 55.4
AUR62013029 Chenopodium quinoa HOM05D003324 ORTHO05D003957 2.8e-24 116.3 117 56.4
ClCG02G011960 Citrullus lanatus HOM05D003324 ORTHO05D003957 2.8e-24 116.3 223 40.4
EL10Ac9g21376 Beta vulgaris HOM05D003324 ORTHO05D003957 3.6e-24 115.9 225 40.9
CANSAT25G2807 Cannabis sativa HOM05D003324 ORTHO05D003957 3.6e-24 115.9 121 56.2
AUR62043667 Chenopodium quinoa HOM05D003324 ORTHO05D003957 3.6e-24 115.9 127 52.8
Glyma.04G003500 Glycine max HOM05D003324 ORTHO05D003957 3.6e-24 115.9 121 53.7
Nn5g30793 Nelumbo nucifera HOM05D003324 ORTHO05D003957 3.6e-24 115.9 209 43.5
vmacro17344 Vaccinium macrocarpon HOM05D003324 ORTHO05D003957 3.6e-24 115.9 132 52.3
Cfa005248 Carpinus fangiana HOM05D003324 ORTHO05D003957 4.7e-24 115.5 227 40.1
Glyma.06G003400 Glycine max HOM05D003324 ORTHO05D003957 4.7e-24 115.5 119 54.6
Lalb_Chr19g0139041 Lupinus albus HOM05D003324 ORTHO05D003957 4.7e-24 115.5 229 37.6
TAR376G0087 Trochodendron aralioides HOM05D003324 ORTHO05D003957 4.7e-24 115.5 104 64.4
BraA09t36757Z Brassica rapa HOM05D003324 ORTHO05D003957 6.2e-24 115.2 177 48.0
GSVIVG01024018001 Vitis vinifera HOM05D003324 ORTHO05D003957 6.2e-24 115.2 127 52.8
Ciclev10028645m.g Citrus clementina HOM05D003324 ORTHO05D003957 8.1e-24 114.8 121 54.5
Dinv14108 Davidia involucrata HOM05D003324 ORTHO05D003957 8.1e-24 114.8 121 56.2
Potri.004G175700 Populus trichocarpa HOM05D003324 ORTHO05D003957 8.1e-24 114.8 216 39.8
Rhsim11G0192300 Rhododendron simsii HOM05D003324 ORTHO05D003957 8.1e-24 114.8 121 56.2
VMungo1309G1547 Vigna mungo HOM05D003324 ORTHO05D003957 8.1e-24 114.8 113 56.6
A09p11150 Brassica napus HOM05D003324 ORTHO05D003957 1.1e-23 114.4 147 53.1
Lj3g0005944 Lotus japonicus HOM05D003324 ORTHO05D003957 1.1e-23 114.4 113 56.6
Nitab4.5_0001225g0150 Nicotiana tabacum HOM05D003324 ORTHO05D003957 1.1e-23 114.4 125 54.4
Nitab4.5_0001583g0110 Nicotiana tabacum HOM05D003324 ORTHO05D003957 1.1e-23 114.4 125 54.4
Oeu005706.1 Olea europaea HOM05D003324 ORTHO05D003957 1.1e-23 114.4 128 56.2
Phvul.009G119100 Phaseolus vulgaris HOM05D003324 ORTHO05D003957 1.1e-23 114.4 113 56.6
CAN.G588.83 Capsicum annuum HOM05D003324 ORTHO05D003957 1.4e-23 114.0 223 38.1
Ca_15299_v3 Cicer arietinum L. HOM05D003324 ORTHO05D003957 1.4e-23 114.0 113 54.9
Haze_02135 Corylus avellana HOM05D003324 ORTHO05D003957 1.4e-23 114.0 128 52.3
HanXRQChr17g0557671 Helianthus annuus HOM05D003324 ORTHO05D003957 1.4e-23 114.0 113 60.2
MD10G1124900 Malus domestica HOM05D003324 ORTHO05D003957 1.4e-23 114.0 134 52.2
Manes.11G096400 Manihot esculenta HOM05D003324 ORTHO05D003957 1.4e-23 114.0 122 55.7
SalBow3G0968 Salvia bowleyana HOM05D003324 ORTHO05D003957 1.4e-23 114.0 99 65.7
TWI79G1203 Tripterygium wilfordii HOM05D003324 ORTHO05D003957 1.4e-23 114.0 125 54.4
MSTRG.27635 Avicennia marina HOM05D003324 ORTHO05D003957 1.8e-23 113.6 125 56.8
CSS0036312 Camellia sinensis var. sinensis HOM05D003324 ORTHO05D003957 1.8e-23 113.6 120 55.0
Peaxi162Scf00045g01446 Petunia axillaris HOM05D003324 ORTHO05D003957 1.8e-23 113.6 118 55.9
Hund00020 Selenicereus undatus HOM05D003324 ORTHO05D003957 1.8e-23 113.6 129 54.3
SGA_v2.0_scaffold207G41923 Striga asiatica HOM05D003324 ORTHO05D003957 1.8e-23 113.6 111 61.3
Ah.01g023030 Amaranthus hybridus HOM05D003324 ORTHO05D003957 2.4e-23 113.2 144 51.4
MELO3C020822.2 Cucumis melo HOM05D003324 ORTHO05D003957 2.4e-23 113.2 118 56.8
Nitab4.5_0000283g0390 Nicotiana tabacum HOM05D003324 ORTHO05D003957 2.4e-23 113.2 126 53.2
PGR142G0482 Punica granatum HOM05D003324 ORTHO05D003957 2.4e-23 113.2 113 58.4
Solyc01g111620.3 Solanum lycopersicum HOM05D003324 ORTHO05D003957 2.4e-23 113.2 125 53.6
Sopen01g053660 Solanum pennellii HOM05D003324 ORTHO05D003957 2.4e-23 113.2 125 53.6
PGSC0003DMG400006169 Solanum tuberosum HOM05D003324 ORTHO05D003957 2.4e-23 113.2 125 53.6
Ah.01g023010 Amaranthus hybridus HOM05D003324 ORTHO05D003957 3.1e-23 112.8 144 51.4
CiPaw.06G121700 Carya illinoinensis HOM05D003324 ORTHO05D003957 3.1e-23 112.8 113 55.8
FAN13G0733 Fragaria x ananassa HOM05D003324 ORTHO05D003957 3.1e-23 112.8 121 53.7
Nitab4.5_0003914g0100 Nicotiana tabacum HOM05D003324 ORTHO05D003957 3.1e-23 112.8 126 53.2
Hund06438 Selenicereus undatus HOM05D003324 ORTHO05D003957 3.1e-23 112.8 176 44.9
unitig_0.g2354 Utricularia gibba HOM05D003324 ORTHO05D003957 3.1e-23 112.8 100 62.0
CDE09G0244 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 4.0e-23 112.5 122 53.3
Cc09_g10160 Coffea canephora HOM05D003324 ORTHO05D003957 4.0e-23 112.5 183 41.5
QL11p050718 Quercus lobata HOM05D003324 ORTHO05D003957 4.0e-23 112.5 110 56.4
Actinidia23578 Actinidia chinensis HOM05D003324 ORTHO05D003957 5.3e-23 112.1 109 63.3
ATR0165G026 Amborella trichopoda HOM05D003324 ORTHO05D003957 5.3e-23 112.1 103 63.1
Migut.N01322 Erythranthe guttata HOM05D003324 ORTHO05D003957 5.3e-23 112.1 128 54.7
Eucgr.I01422 Eucalyptus grandis HOM05D003324 ORTHO05D003957 5.3e-23 112.1 113 57.5
Peaxi162Scf00362g00628 Petunia axillaris HOM05D003324 ORTHO05D003957 5.3e-23 112.1 126 52.4
MSTRG.5453 Avicennia marina HOM05D003324 ORTHO05D003957 6.9e-23 111.7 72 80.6
C03p85190 Brassica napus HOM05D003324 ORTHO05D003957 6.9e-23 111.7 98 63.3
CsaV3_2G016130 Cucumis sativus L. HOM05D003324 ORTHO05D003957 6.9e-23 111.7 103 63.1
FvH4_5g30360 Fragaria vesca HOM05D003324 ORTHO05D003957 6.9e-23 111.7 121 52.9
Lalb_Chr23g0264991 Lupinus albus HOM05D003324 ORTHO05D003957 6.9e-23 111.7 114 55.3
TWI31G0567 Tripterygium wilfordii HOM05D003324 ORTHO05D003957 6.9e-23 111.7 123 54.5
ECA233G0359 Erigeron canadensis HOM05D003324 ORTHO05D003957 9.0e-23 111.3 130 52.3
Lsat_1_v5_gn_8_124700 Lactuca sativa HOM05D003324 ORTHO05D003957 9.0e-23 111.3 160 48.1
PGSC0003DMG400014843 Solanum tuberosum HOM05D003324 ORTHO05D003957 9.0e-23 111.3 125 52.8
FAN04G0412 Fragaria x ananassa HOM05D003324 ORTHO05D003957 1.2e-22 110.9 121 52.9
FAN08G1567 Fragaria x ananassa HOM05D003324 ORTHO05D003957 1.2e-22 110.9 120 53.3
Prupe.8G165900 Prunus persica HOM05D003324 ORTHO05D003957 1.2e-22 110.9 179 44.7
Potri.009G135600 Populus trichocarpa HOM05D003324 ORTHO05D003957 1.5e-22 110.5 221 40.3
HPP92_020725 Vanilla planifolia HOM05D003324 ORTHO05D003957 1.5e-22 110.5 136 50.0
Aqoxy5G03024 Aquilegia oxysepala HOM05D003324 ORTHO05D003957 2.0e-22 110.2 147 49.0
CAN.G940.13 Capsicum annuum HOM05D003324 ORTHO05D003957 2.0e-22 110.2 203 42.4
CDE02G1043 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 2.0e-22 110.2 182 43.4
MELO3C013351.2 Cucumis melo HOM05D003324 ORTHO05D003957 2.0e-22 110.2 197 45.2
DCAR_022813 Daucus carota HOM05D003324 ORTHO05D003957 2.0e-22 110.2 67 83.6
DCAR_022814 Daucus carota HOM05D003324 ORTHO05D003957 2.0e-22 110.2 72 79.2
RcHm_v2.0_Chr7g0224771 Rosa chinensis HOM05D003324 ORTHO05D003957 2.0e-22 110.2 121 52.1
FAN18G2325 Fragaria x ananassa HOM05D003324 ORTHO05D003957 2.6e-22 109.8 121 52.1
Sabra09G0105300 Salix brachista HOM05D003324 ORTHO05D003957 2.6e-22 109.8 139 47.5
Solyc08g005980.3 Solanum lycopersicum HOM05D003324 ORTHO05D003957 2.6e-22 109.8 125 52.0
Sopen08g001950 Solanum pennellii HOM05D003324 ORTHO05D003957 2.6e-22 109.8 120 54.2
Migut.B00077 Erythranthe guttata HOM05D003324 ORTHO05D003957 3.4e-22 109.4 118 54.2
SalBow1G2196 Salvia bowleyana HOM05D003324 ORTHO05D003957 3.4e-22 109.4 113 56.6
SEGI_35537 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 3.4e-22 109.4 118 55.1
CsaV3_7G001050 Cucumis sativus L. HOM05D003324 ORTHO05D003957 4.4e-22 109.0 113 54.9
TPR.G28480 Trifolium pratense HOM05D003324 ORTHO05D003957 5.8e-22 108.6 70 78.6
Oeu021646.3 Olea europaea HOM05D003324 ORTHO05D003957 9.9e-22 107.8 72 76.4
Oeu061403.1 Olea europaea HOM05D003324 ORTHO05D003957 9.9e-22 107.8 122 56.6
Sed0006688 Sechium edule HOM05D003324 ORTHO05D003957 9.9e-22 107.8 177 45.2
unitig_52.g17371 Utricularia gibba HOM05D003324 ORTHO05D003957 1.3e-21 107.5 67 82.1
Zm00001eb004310 Zea mays HOM05D003324 ORTHO05D003957 1.3e-21 107.5 118 57.6
ClCG02G004070 Citrullus lanatus HOM05D003324 ORTHO05D003957 1.7e-21 107.1 152 44.1
Mapoly0140s0003 Marchantia polymorpha HOM05D003324 ORTHO05D003957 1.7e-21 107.1 73 76.7
Os03g0156700 Oryza sativa ssp. japonica HOM05D003324 ORTHO05D003957 1.7e-21 107.1 114 55.3
Rhsim05G0056600 Rhododendron simsii HOM05D003324 ORTHO05D003957 2.2e-21 106.7 154 45.5
AagrBONN_evm.TU.Sc2ySwM_117.406 Anthoceros agrestis HOM05D003324 ORTHO05D003957 3.8e-21 105.9 67 74.6
SEGI_27932 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 4.9e-21 105.5 174 42.0
CBR_g11222 Chara braunii HOM05D003324 ORTHO05D003957 1.1e-20 104.4 162 45.7
Actinidia00625 Actinidia chinensis HOM05D003324 ORTHO05D003957 1.4e-20 104.0 67 79.1
Sabra04G0117600 Salix brachista HOM05D003324 ORTHO05D003957 1.4e-20 104.0 118 51.7
SEGI_27032 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 3.2e-20 102.8 72 72.2
SHI33188 Sapria himalayana HOM05D003324 ORTHO05D003957 5.4e-20 102.1 112 54.5
Pp3c3_4090 Physcomitrium patens HOM05D003324 ORTHO05D003957 7.1e-20 101.7 118 52.5
Pp3c13_7910 Physcomitrium patens HOM05D003324 ORTHO05D003957 9.3e-20 101.3 68 73.5
SMO143G0242 Selaginella moellendorffii HOM05D003324 ORTHO05D003957 1.6e-19 100.5 109 54.1
Pp3c26_12100 Physcomitrium patens HOM05D003324 ORTHO05D003957 4.6e-19 99.0 68 72.1
Pp3c4_29830 Physcomitrium patens HOM05D003324 ORTHO05D003957 6.0e-19 98.6 68 69.1
Dinv41937 Davidia involucrata HOM05D003324 ORTHO05D003957 7.8e-19 98.2 114 50.9
SMO356G0654 Selaginella moellendorffii HOM05D003324 ORTHO05D003957 8.7e-18 94.7 67 76.1
CBR_g20320 Chara braunii HOM05D003324 ORTHO05D003957 2.6e-14 83.2 69 60.9
SEGI_16425 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 6.4e-13 78.6 59 64.4
Actinidia20513 Actinidia chinensis HOM05D003324 ORTHO05D003957 1.9e-12 77.0 50 78.0
MCO03G400 Micromonas commoda HOM05D003324 ORTHO05D005934 1.9e-12 77.0 66 56.1
Cre14.g629650 Chlamydomonas reinhardtii HOM05D003324 ORTHO05D003957 5.4e-12 75.5 63 58.7
BcaC01g00850 Brassica carinata HOM05D003324 ORTHO05D003957 3.5e-11 72.8 45 80.0
PRCOL_00002310 Prasinoderma coloniale HOM05D003324 ORTHO05D005934 3.9e-10 69.3 103 40.8
PRCOL_00004698 Prasinoderma coloniale HOM05D003324 ORTHO05D003957 2.6e-06 56.6 55 54.5
Glyma.09G218700 Glycine max HOM05D003324 ORTHO05D003957 4.5e-06 55.8 32 84.4


User provided reference genes

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