Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 3.9e-137 491.5 252 100.0
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 8.8e-73 277.7 194 75.8
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 1.5e-72 276.9 194 76.3
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 1.5e-72 276.9 194 76.3
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 2.0e-72 276.6 233 65.7
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 3.7e-71 272.3 229 67.7
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 6.3e-71 271.6 196 75.0
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 8.2e-71 271.2 196 74.0
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 8.2e-71 271.2 194 73.2
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 2.4e-70 269.6 195 73.8
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 3.1e-70 269.2 197 75.1
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 4.1e-70 268.9 195 74.4
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 5.3e-70 268.5 195 74.4
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 5.3e-70 268.5 196 73.5
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 6.9e-70 268.1 194 73.7
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 9.1e-70 267.7 213 69.0
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 1.2e-69 267.3 194 73.2
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.2e-69 267.3 194 73.7
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 1.5e-69 266.9 211 68.7
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 1.5e-69 266.9 187 75.9
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 2.0e-69 266.5 187 74.3
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 2.6e-69 266.2 211 67.3
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 2.6e-69 266.2 196 75.0
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 3.4e-69 265.8 197 74.1
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 3.4e-69 265.8 195 73.8
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 5.9e-69 265.0 194 71.6
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 7.7e-69 264.6 194 73.2
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 7.7e-69 264.6 196 75.0
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 7.7e-69 264.6 203 73.4
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 1.0e-68 264.2 194 74.2
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 1.3e-68 263.8 194 72.7
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 1.3e-68 263.8 194 71.6
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 1.7e-68 263.5 211 67.3
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 1.7e-68 263.5 187 73.8
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 2.2e-68 263.1 194 70.1
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 2.2e-68 263.1 196 73.5
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 3.8e-68 262.3 194 71.6
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 3.8e-68 262.3 193 71.5
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 5.0e-68 261.9 211 65.9
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 6.5e-68 261.5 196 73.0
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.1e-67 260.8 224 66.1
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 1.4e-67 260.4 194 72.7
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.9e-67 260.0 194 72.7
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.9e-67 260.0 194 72.7
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 1.9e-67 260.0 196 73.0
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.9e-67 260.0 193 72.5
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 3.2e-67 259.2 187 72.2
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 4.2e-67 258.8 194 71.1
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 9.4e-67 257.7 196 71.9
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 1.2e-66 257.3 199 69.3
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 1.2e-66 257.3 194 69.1
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 1.6e-66 256.9 196 67.9
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.6e-66 256.9 201 70.6
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 2.1e-66 256.5 194 68.6
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 3.6e-66 255.8 194 68.6
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 4.7e-66 255.4 194 69.1
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 7.9e-66 254.6 187 69.5
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 3.9e-65 252.3 187 68.4
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 3.9e-65 252.3 187 68.4
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 6.7e-65 251.5 187 67.4
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 6.7e-65 251.5 187 67.4
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 6.7e-65 251.5 187 67.9
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 6.7e-65 251.5 187 67.4
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 8.8e-65 251.1 187 67.9
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 8.8e-65 251.1 184 73.9
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.7e-63 246.9 192 67.2
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 2.2e-63 246.5 195 68.2
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 2.8e-63 246.1 171 76.6
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 3.7e-63 245.7 194 66.5
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 4.8e-63 245.4 188 67.0
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 6.3e-63 245.0 194 65.5
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 3.1e-62 242.7 174 73.6
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 3.1e-62 242.7 170 75.3
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 7.0e-62 241.5 198 69.7
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 5.9e-61 238.4 181 70.2
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 5.9e-61 238.4 195 64.6
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 7.7e-61 238.0 195 66.2
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 1.4e-59 233.8 187 64.7
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 2.5e-59 233.0 251 54.6
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 2.5e-59 233.0 171 71.9
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.7e-58 229.6 194 66.0
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 8.0e-58 228.0 156 75.6
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 6.7e-57 224.9 194 63.9
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 8.8e-57 224.6 196 62.2
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 1.5e-56 223.8 185 67.0
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 4.4e-56 222.2 209 60.8
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 7.4e-56 221.5 194 62.9
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 9.7e-56 221.1 183 65.0
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.7e-55 220.3 190 65.3
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 2.2e-55 219.9 243 54.3
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 3.1e-54 216.1 245 53.1
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.0e-53 213.4 209 58.4
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.6e-53 213.0 195 62.1
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.7e-50 203.0 182 62.1
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 3.6e-50 202.6 182 62.1
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 8.0e-50 201.4 194 57.7
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 1.2e-48 197.6 159 66.7
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 1.3e-47 194.1 195 59.5
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 2.8e-47 193.0 209 50.2
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 1.8e-46 190.3 202 53.0
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 1.8e-46 190.3 189 60.3
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 5.3e-46 188.7 201 50.7
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 7.0e-46 188.3 148 67.6
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 1.3e-44 184.1 169 58.6
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 2.5e-43 179.9 136 68.4
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 2.1e-42 176.8 203 53.2
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 6.1e-42 175.3 251 41.8
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 4.0e-41 172.6 118 76.3
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 1.5e-40 170.6 118 69.5
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 1.5e-40 170.6 118 69.5
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.6e-40 169.9 220 49.1
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 3.4e-40 169.5 117 75.2
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 4.1e-38 162.5 196 54.6
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.1e-38 162.5 148 60.8
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 3.5e-37 159.5 194 47.9
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 2.8e-34 149.8 96 78.1
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.7e-34 149.1 119 64.7
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 2.8e-31 139.8 239 36.4
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.1e-30 137.9 153 53.6
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 2.8e-26 123.2 133 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 2.2e-23 113.6 201 39.8
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 1.9e-22 110.5 83 66.3
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 3.6e-18 96.3 84 66.7
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 1.1e-17 94.7 184 34.8
SalBow8G0163 Salvia bowleyana HOM05D004498 ORTHO05D005300 7.5e-16 88.6 62 75.8
SalBow8G4260 Salvia bowleyana HOM05D004498 ORTHO05D005300 7.5e-16 88.6 62 75.8
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 6.4e-15 85.5 226 29.6
Rhsim07G0010100 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.6e-13 80.9 210 35.7
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 3.5e-13 79.7 48 81.2
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 4.6e-13 79.3 43 86.0
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 1.0e-12 78.2 71 59.2
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 1.3e-12 77.8 43 81.4
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 8.6e-12 75.1 77 54.5
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 8.6e-12 75.1 77 54.5
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 1.5e-11 74.3 46 82.6
PGR142G0681 Punica granatum HOM05D004498 ORTHO05D005300 1.5e-11 74.3 80 56.2
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.6e-10 70.9 46 76.1
CSS0021260 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 1.8e-09 67.4 50 70.0
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 4.0e-09 66.2 108 45.4


User provided reference genes

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