Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 0.0e+00 1087.8 534 100.0
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.8e-168 596.7 451 63.4
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 4.2e-165 585.5 453 63.1
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 8.1e-161 571.2 451 61.4
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 9.0e-160 567.8 452 61.9
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 7.1e-157 558.1 466 58.2
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 9.3e-157 557.8 450 59.8
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 6.7e-155 551.6 450 59.8
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 6.2e-153 545.0 450 58.4
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 2.0e-151 540.0 451 58.1
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 4.5e-151 538.9 470 55.5
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 1.2e-148 530.8 459 57.5
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 3.9e-147 525.8 452 57.5
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 8.7e-147 524.6 461 56.8
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 1.5e-146 523.9 453 56.5
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.9e-146 523.5 465 56.8
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 1.9e-146 523.5 460 56.3
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 2.5e-146 523.1 450 56.2
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 2.1e-145 520.0 460 55.4
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 2.8e-145 519.6 460 55.4
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.8e-145 518.8 450 56.2
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 8.2e-145 518.1 466 54.3
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 8.2e-145 518.1 460 55.2
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 6.9e-144 515.0 466 56.9
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 9.0e-144 514.6 451 57.9
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 1.5e-143 513.8 460 54.3
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 2.6e-143 513.1 515 51.1
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 2.6e-143 513.1 448 58.5
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 3.4e-143 512.7 460 55.2
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 4.5e-143 512.3 455 55.6
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 7.1e-141 505.0 455 56.0
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 4.6e-140 502.3 449 54.6
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 6.0e-140 501.9 451 57.6
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.5e-138 497.3 450 54.7
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.9e-138 496.9 588 47.8
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 1.9e-138 496.9 453 53.9
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 3.3e-138 496.1 462 53.2
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 5.7e-138 495.4 450 57.6
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 7.4e-138 495.0 594 45.5
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.8e-136 490.3 498 51.8
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 1.2e-135 487.6 449 51.7
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 5.9e-135 485.3 453 53.9
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 8.5e-134 481.5 477 51.6
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 1.9e-133 480.3 462 52.8
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.2e-132 477.6 451 52.3
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 7.9e-132 474.9 450 54.0
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 7.9e-132 474.9 371 61.7
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 5.1e-131 472.2 456 51.8
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 6.7e-131 471.9 450 50.4
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 6.7e-131 471.9 607 43.3
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 3.3e-130 469.5 445 52.1
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 5.7e-130 468.8 454 51.1
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 1.4e-128 464.2 457 51.6
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 1.4e-128 464.2 330 67.6
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 9.1e-128 461.5 451 53.0
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 2.6e-127 459.9 450 49.1
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 5.9e-127 458.8 457 51.4
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 2.2e-126 456.8 461 50.8
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.4e-125 454.1 453 51.4
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 5.5e-125 452.2 405 55.1
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 7.2e-125 451.8 454 51.1
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 3.6e-124 449.5 464 49.4
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 3.6e-124 449.5 471 50.7
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 7.9e-124 448.4 464 48.5
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 1.0e-123 448.0 454 50.2
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 3.0e-123 446.4 455 49.9
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 3.9e-123 446.0 481 48.2
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 5.1e-123 445.7 454 50.0
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 6.7e-123 445.3 454 50.4
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 2.6e-122 443.4 454 49.3
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 4.4e-122 442.6 454 49.8
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 5.7e-122 442.2 455 49.9
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 5.7e-122 442.2 458 49.1
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 7.4e-122 441.8 454 49.6
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 7.4e-122 441.8 460 50.4
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 9.7e-122 441.4 454 49.1
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 1.8e-120 437.2 463 49.0
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 2.6e-119 433.3 560 44.6
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.5e-119 432.6 453 51.0
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.7e-118 430.6 451 48.3
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 1.7e-118 430.6 461 49.7
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 9.4e-117 424.9 479 46.3
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.2e-116 424.5 450 47.1
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 1.4e-115 421.0 457 49.0
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 3.9e-115 419.5 466 46.8
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.2e-110 403.7 489 44.0
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 1.8e-107 394.0 460 47.8
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 4.0e-107 392.9 412 47.8
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 7.7e-103 378.6 407 49.9
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 6.1e-100 369.0 458 41.5
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 5.2e-99 365.9 458 43.9
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 2.0e-98 364.0 457 44.0
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 2.7e-95 353.6 421 43.5
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 5.9e-87 325.9 453 39.3
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 2.8e-84 317.0 363 43.8
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.9e-83 312.0 350 42.6
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 2.0e-74 284.3 237 55.7
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 4.1e-72 276.6 269 53.2
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 2.3e-70 270.8 451 35.5
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 6.2e-68 262.7 196 61.7
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 1.7e-62 244.6 255 50.2
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-56 225.3 356 35.7
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 4.8e-52 209.9 225 49.3
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 8.1e-52 209.1 220 50.0
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.1e-48 198.7 454 31.5
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.8e-43 181.4 218 49.5
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 3.1e-43 180.6 169 54.4
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 2.7e-39 167.5 154 57.1
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.8e-38 164.9 314 31.2
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.9e-37 161.4 328 30.2
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.1e-36 156.0 285 31.9
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.3e-33 148.7 215 35.3
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.5e-32 143.3 190 40.5
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.7e-31 141.0 326 29.8
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.7e-29 133.3 184 37.0
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.6e-26 124.4 271 29.9
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.3e-25 122.1 139 48.2
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.8e-25 120.6 214 30.8
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.4e-25 119.4 173 39.9
PRCOL_00003726 Prasinoderma coloniale HOM05D004701 ORTHO05D005220 5.5e-24 116.7 283 28.3
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 3.5e-23 114.0 167 39.5
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.9e-23 112.8 253 28.9
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 1.9e-21 108.2 87 58.6
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 1.9e-21 108.2 147 37.4
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.2e-20 104.8 151 37.7
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 6.9e-19 99.8 119 39.5
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla HOM05D004701 ORTHO05D005220 6.5e-17 93.2 98 44.9
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 1.1e-13 82.4 93 47.3
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.3e-13 80.9 173 28.9
Cre02.g118450 Chlamydomonas reinhardtii HOM05D004701 ORTHO05D005220 4.8e-12 77.0 302 24.8
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.2e-12 76.3 97 40.2
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis HOM05D004701 ORTHO05D005220 1.1e-11 75.9 217 28.6
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 2.4e-11 74.7 58 63.8
MBI18_g07590_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D015058 2.0e-10 71.6 70 47.1
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 4.5e-10 70.5 76 43.4
Haze_06050 Corylus avellana HOM05D022078 ORTHO05D024871 6.5e-09 66.6 58 60.3
CSS0018594 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.2e-07 62.4 41 70.7
CSS0027371 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.6e-07 60.8 41 68.3
Oeu052446.1 Olea europaea HOM05D004701 ORTHO05D005220 1.0e-06 59.3 78 38.5
MBI05_g10671_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 2.3e-06 58.2 34 73.5
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.3e-06 58.2 71 40.8


User provided reference genes

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