Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4047 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 9.1e-95 350.1 165 100.0
CDE02G3581 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 2.5e-68 262.3 134 91.8
RhsimMtG0002200 Rhododendron simsii HOM05D000533 ORTHO05D001069 8.3e-64 247.3 191 67.5
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 4.1e-47 191.8 99 91.9
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.7e-45 186.4 105 83.8
Ca_26706_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.7e-45 186.4 105 83.8
Aqoxy3G01140 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.3e-44 181.8 85 98.8
Dinv06691 Davidia involucrata HOM05D000533 ORTHO05D001069 7.3e-44 181.0 85 98.8
HanXRQChr08g0236031 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-43 179.5 85 98.8
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-43 179.5 85 98.8
Lalb_Chr00c24g0407301 Lupinus albus HOM05D000533 ORTHO05D001069 2.1e-43 179.5 84 97.6
Aqoxy4G01613 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.7e-43 178.3 84 97.6
TPR.G22491 Trifolium pratense HOM05D000533 ORTHO05D001069 8.1e-43 177.6 84 96.4
Cpa.g.sc263.14 Carica papaya HOM05D000533 ORTHO05D001069 1.8e-42 176.4 84 97.6
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 1.8e-42 176.4 85 95.3
CsaV3_6G025230 Cucumis sativus L. HOM05D000533 ORTHO05D001069 5.2e-42 174.9 85 96.5
CsaV3_6G025300 Cucumis sativus L. HOM05D000533 ORTHO05D001069 5.2e-42 174.9 85 96.5
CsaV3_UNG208530 Cucumis sativus L. HOM05D000533 ORTHO05D001069 5.2e-42 174.9 85 96.5
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 5.2e-42 174.9 84 96.4
Sed0020382 Sechium edule HOM05D000533 ORTHO05D001069 5.2e-42 174.9 85 96.5
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-41 173.7 84 96.4
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 2.6e-41 172.6 81 95.1
HanXRQChr10g0297201 Helianthus annuus HOM05D000533 ORTHO05D001069 3.4e-41 172.2 84 96.4
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 5.8e-41 171.4 81 97.5
Thhalv10028891m.g Eutrema salsugineum HOM05D000533 ORTHO05D001069 5.8e-41 171.4 81 97.5
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 7.6e-41 171.0 85 95.3
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-40 170.2 100 83.0
Cfa023037 Carpinus fangiana HOM05D000533 ORTHO05D001069 2.2e-40 169.5 81 96.3
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 2.2e-40 169.5 85 92.9
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 2.9e-40 169.1 81 96.3
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 2.9e-40 169.1 81 96.3
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 6.4e-40 167.9 81 96.3
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 6.4e-40 167.9 81 96.3
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 8.4e-40 167.5 81 96.3
Peaxi162Scf00197g00027 Petunia axillaris HOM05D000533 ORTHO05D001069 1.1e-39 167.2 83 92.8
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 1.4e-39 166.8 81 95.1
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 9.2e-39 164.1 81 95.1
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 1.6e-38 163.3 84 89.3
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.7e-38 162.5 81 92.6
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 2.7e-38 162.5 85 88.2
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 3.5e-38 162.2 81 93.8
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 6.6e-37 157.9 85 87.1
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.1e-36 157.1 81 91.4
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.5e-36 156.8 81 91.4
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.5e-36 156.8 81 91.4
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 9.6e-36 154.1 81 86.4
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 9.6e-36 154.1 81 86.4
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 3.6e-35 152.1 81 90.1
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 3.6e-35 152.1 81 90.1
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.9e-34 147.9 88 79.5
PGSC0003DMG400029134 Solanum tuberosum HOM05D000533 ORTHO05D001069 1.2e-33 147.1 80 86.2
Nitab4.5_0004030g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.8e-33 144.8 71 90.1
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.8e-32 142.1 89 73.0
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 6.4e-32 141.4 64 100.0
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.2e-31 139.0 81 79.0
A04p09590 Brassica napus HOM05D000533 ORTHO05D001069 4.2e-31 138.7 70 91.4
C01p34660 Brassica napus HOM05D000533 ORTHO05D001069 4.2e-31 138.7 70 91.4
BolSC28t60325H Brassica oleracea HOM05D000533 ORTHO05D001069 4.2e-31 138.7 70 91.4
BolSC28t60427H Brassica oleracea HOM05D000533 ORTHO05D001069 4.2e-31 138.7 70 91.4
BraSC159t45715Z Brassica rapa HOM05D000533 ORTHO05D001069 4.2e-31 138.7 70 91.4
CBR_g30873 Chara braunii HOM05D004541 ORTHO05D000800 4.2e-31 138.7 80 81.2
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 9.3e-31 137.5 71 88.7
ATR1155G032 Amborella trichopoda HOM05D000533 ORTHO05D001069 3.0e-29 132.5 80 76.2
Nitab4.5_0000172g0870 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.1e-29 131.7 71 83.1
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 4.3e-28 128.6 82 75.6
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 4.8e-27 125.2 81 70.4
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 4.0e-26 122.1 71 78.9
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-23 113.6 64 76.6
CAN.G566.26 Capsicum annuum HOM05D000533 ORTHO05D001069 4.2e-23 112.1 64 81.2
arahy.Tifrunner.gnm1.ann1.AMUJ6F Arachis hypogaea HOM05D000533 ORTHO05D001069 2.7e-22 109.4 50 98.0
ATR1208G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 1.0e-21 107.5 81 59.3
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.3e-21 107.1 116 48.3
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 6.7e-21 104.8 81 61.7
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.7e-21 104.4 65 73.8
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 1.1e-20 104.0 55 87.3
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 4.3e-20 102.1 81 59.3
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 7.4e-20 101.3 81 55.6
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 6.2e-19 98.2 81 51.9
Solyc12g036600.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.0e-17 93.2 53 83.0
Actinidia34826 Actinidia chinensis HOM05D000533 ORTHO05D001069 2.6e-17 92.8 44 95.5
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 2.6e-17 92.8 44 95.5
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 9.9e-17 90.9 67 58.2
HanXRQChr04g0109051 Helianthus annuus HOM05D000533 ORTHO05D001069 9.9e-17 90.9 45 97.8
Lsat_1_v5_gn_5_16221 Lactuca sativa HOM05D000533 ORTHO05D001069 3.8e-16 89.0 87 56.3
GSVIVG01006222001 Vitis vinifera HOM05D000533 ORTHO05D001069 8.4e-16 87.8 46 82.6
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 1.4e-15 87.0 85 50.6
Ah.10g028340 Amaranthus hybridus HOM05D000533 ORTHO05D001069 4.2e-15 85.5 41 97.6
AUR62043913 Chenopodium quinoa HOM05D000533 ORTHO05D001069 7.1e-15 84.7 50 86.0
Psat0s3560g0120 Pisum sativum HOM05D000533 ORTHO05D001069 1.6e-14 83.6 43 93.0
BraSC48t46306Z Brassica rapa HOM05D000533 ORTHO05D001069 2.7e-14 82.8 41 95.1
Ca_26685_v3 Cicer arietinum L. HOM05D000533 ORTHO05D013765 1.0e-13 80.9 44 86.4
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 3.9e-13 79.0 71 60.6
Nitab4.5_0006806g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.7e-13 77.8 44 75.0
Nitab4.5_0001034g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.8e-11 72.0 53 69.8
Aqoxy84s002 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 6.2e-11 71.6 81 42.0
Sopen01g027210 Solanum pennellii HOM05D000533 ORTHO05D001069 6.2e-11 71.6 33 87.9
Nitab4.5_0000120g0060 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.4e-10 69.7 41 85.4
CsaV3_6G024190 Cucumis sativus L. HOM05D000533 ORTHO05D001069 9.0e-10 67.8 31 100.0
FAN26G0937 Fragaria x ananassa HOM05D000533 ORTHO05D001069 3.4e-09 65.9 81 48.1
Solyc09g031550.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.5e-09 65.5 57 52.6
CAN.G247.8 Capsicum annuum HOM05D000533 ORTHO05D006664 1.3e-08 63.9 31 93.5
Haze_21655 Corylus avellana HOM05D004019 ORTHO05D005136 1.7e-08 63.5 69 50.7
FAN26G3352 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.7e-08 63.5 35 82.9
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-07 60.5 30 90.0
Nitab4.5_0001291g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-07 60.5 32 87.5
Ca_29118_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.9e-07 60.1 82 39.0
Nitab4.5_0012067g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.2e-07 59.3 30 86.7
SHI06682 Sapria himalayana HOM05D000533 ORTHO05D001069 1.6e-06 57.0 71 43.7
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 4.6e-06 55.5 86 40.7
SHI11894 Sapria himalayana HOM05D000533 ORTHO05D001069 6.0e-06 55.1 46 63.0


User provided reference genes

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