Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 5.1e-257 890.6 451 100.0
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 2.2e-223 778.9 450 88.2
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 3.0e-116 422.9 318 68.2
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 2.6e-115 419.9 317 67.2
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 8.5e-111 404.8 408 53.2
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 5.5e-110 402.1 390 54.6
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 1.4e-108 397.5 317 62.1
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 7.4e-107 391.7 360 58.3
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 8.5e-103 378.3 360 55.3
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 8.5e-103 378.3 307 60.9
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 3.2e-102 376.3 317 59.3
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 5.5e-102 375.6 323 59.1
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 9.4e-102 374.8 327 59.3
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 1.2e-101 374.4 318 58.8
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 3.0e-100 369.8 423 48.5
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 8.8e-100 368.2 423 48.2
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 8.8e-100 368.2 329 57.1
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 1.2e-99 367.9 329 57.1
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 4.4e-99 365.9 322 59.0
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 7.5e-99 365.2 376 51.9
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 2.2e-98 363.6 307 60.3
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.8e-98 363.2 305 61.0
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 4.8e-98 362.5 318 58.8
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 3.1e-97 359.8 375 53.3
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 3.1e-97 359.8 304 58.9
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 5.3e-97 359.0 389 50.9
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 7.0e-97 358.6 314 58.6
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 1.2e-96 357.8 456 48.2
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 1.2e-96 357.8 319 57.7
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 2.0e-96 357.1 325 56.9
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 3.5e-96 356.3 304 57.6
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 3.5e-96 356.3 313 57.2
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 7.7e-96 355.1 316 57.3
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.3e-95 354.4 313 56.5
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.2e-95 353.6 330 56.4
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 2.9e-95 353.2 344 54.9
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.9e-94 350.5 326 54.0
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 1.9e-94 350.5 330 56.4
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 4.2e-94 349.4 367 52.3
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 5.5e-94 349.0 334 52.4
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 3.6e-93 346.3 350 52.6
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 4.7e-93 345.9 316 56.3
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 1.8e-92 344.0 304 58.6
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 4.0e-92 342.8 297 59.3
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.5e-91 340.9 292 57.5
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 1.5e-91 340.9 318 53.5
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 1.5e-91 340.9 407 45.2
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 2.0e-91 340.5 369 50.9
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.6e-91 340.1 292 58.2
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 2.6e-91 340.1 314 56.4
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 4.4e-91 339.3 342 51.8
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 4.4e-91 339.3 302 57.0
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 9.8e-91 338.2 342 51.5
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 1.7e-90 337.4 360 50.8
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.7e-90 337.4 292 56.8
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 1.7e-90 337.4 330 50.0
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 2.8e-90 336.7 447 44.3
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 2.8e-90 336.7 334 51.2
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 3.7e-90 336.3 315 55.2
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 3.7e-90 336.3 292 58.2
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 3.7e-90 336.3 292 57.2
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 1.1e-89 334.7 386 47.9
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 1.4e-89 334.3 315 54.6
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 1.8e-89 334.0 433 45.3
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 4.1e-89 332.8 309 53.4
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 9.1e-89 331.6 313 51.8
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 1.2e-88 331.3 370 48.4
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 2.0e-88 330.5 399 44.9
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 4.5e-88 329.3 323 51.4
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 5.9e-88 328.9 375 50.9
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 7.7e-88 328.6 329 54.1
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 1.0e-87 328.2 302 55.0
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 3.8e-87 326.2 307 54.4
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 1.9e-86 323.9 364 48.6
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 1.9e-86 323.9 307 52.4
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 5.5e-86 322.4 334 48.8
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 9.5e-86 321.6 317 53.0
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 2.1e-85 320.5 449 42.3
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 4.7e-85 319.3 315 53.0
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 2.3e-84 317.0 344 51.5
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 1.5e-83 314.3 319 51.4
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 3.4e-83 313.2 308 52.9
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 2.2e-82 310.5 371 46.6
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 2.8e-82 310.1 356 46.9
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 2.8e-82 310.1 356 46.9
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 8.3e-82 308.5 345 50.1
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 1.1e-81 308.1 356 46.6
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 5.4e-81 305.8 354 47.5
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 1.6e-80 304.3 318 50.9
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 4.5e-80 302.8 272 53.3
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 5.9e-80 302.4 349 47.9
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 5.9e-80 302.4 420 43.8
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.7e-79 300.8 334 47.9
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 2.9e-79 300.1 334 47.9
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 3.9e-79 299.7 431 41.1
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 8.6e-79 298.5 327 48.0
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 4.3e-78 296.2 314 49.4
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 4.3e-78 296.2 314 49.4
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 1.2e-77 294.7 314 48.7
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 1.0e-76 291.6 314 49.4
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 2.3e-76 290.4 360 45.6
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 1.2e-75 288.1 326 48.2
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 2.6e-75 287.0 334 45.8
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 9.8e-75 285.0 453 38.9
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 2.2e-74 283.9 319 46.1
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 1.7e-71 274.2 203 67.0
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 9.5e-70 268.5 238 59.7
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 1.2e-69 268.1 454 37.7
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 1.9e-62 244.2 329 38.9
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 1.4e-60 238.0 272 43.0
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.8e-60 237.7 233 48.1
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 5.2e-60 236.1 346 43.9
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 5.4e-57 226.1 205 54.1
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.1e-54 218.4 367 37.3
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 5.8e-51 206.1 284 43.0
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 3.5e-40 170.2 218 45.9
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.9e-33 147.9 111 60.4
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.7e-32 144.1 124 62.1
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 1.4e-25 121.7 284 26.8
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 3.5e-24 117.1 128 47.7
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 8.7e-23 112.5 106 51.9
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.9e-22 111.3 109 51.4
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 7.4e-22 109.4 125 47.2
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 2.8e-21 107.5 111 49.5
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 1.1e-20 105.5 87 57.5
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.2e-16 92.0 84 58.3
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 3.9e-15 87.0 92 48.9
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 1.5e-14 85.1 59 67.8
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 7.4e-14 82.8 56 69.6
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 1.3e-13 82.0 180 27.8
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 1.1e-12 79.0 129 40.3
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 3.2e-09 67.4 54 59.3
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 3.2e-09 67.4 54 59.3


User provided reference genes

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