Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 2.9e-254 881.7 548 100.0
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 1.3e-150 537.3 563 57.5
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 4.6e-143 512.3 544 60.5
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 1.5e-141 507.3 552 57.4
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 4.3e-141 505.8 555 58.6
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 5.6e-141 505.4 565 59.3
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 5.6e-141 505.4 548 58.0
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 9.0e-139 498.0 547 58.0
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 1.1e-136 491.1 533 55.9
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 4.6e-135 485.7 554 55.4
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 8.7e-134 481.5 552 58.0
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.9e-133 480.3 554 58.8
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 3.3e-133 479.6 567 54.1
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 9.6e-133 478.0 546 57.5
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.3e-132 477.6 553 55.2
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 8.1e-132 474.9 556 56.1
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.4e-131 474.2 491 61.5
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 3.1e-131 473.0 532 58.3
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 1.5e-130 470.7 548 54.2
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 1.5e-130 470.7 544 56.8
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 4.5e-130 469.2 498 60.6
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.1e-128 464.5 498 60.0
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 1.1e-128 464.5 547 54.3
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 2.4e-128 463.4 545 57.1
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 4.2e-128 462.6 539 54.7
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 4.2e-128 462.6 523 55.8
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 7.1e-128 461.8 584 53.8
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 1.2e-127 461.1 536 53.4
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 2.1e-127 460.3 489 57.7
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 2.1e-127 460.3 583 52.5
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 6.0e-127 458.8 548 54.0
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 7.9e-127 458.4 544 53.7
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 1.0e-126 458.0 574 54.0
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 1.3e-126 457.6 558 51.8
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.3e-126 457.6 548 54.7
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 2.3e-126 456.8 538 54.3
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 3.9e-126 456.1 545 56.9
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 5.1e-126 455.7 546 52.2
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 8.7e-126 454.9 542 60.3
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 1.9e-125 453.8 537 55.5
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 5.6e-125 452.2 534 54.5
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 9.6e-125 451.4 533 53.7
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 9.6e-125 451.4 551 51.5
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 4.8e-124 449.1 544 55.7
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 8.1e-124 448.4 497 54.9
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 8.1e-124 448.4 555 52.1
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 2.0e-122 443.7 562 51.2
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 2.0e-122 443.7 549 54.6
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 4.5e-122 442.6 548 53.1
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 5.8e-122 442.2 564 51.4
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 8.4e-121 438.3 551 53.4
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 1.4e-120 437.6 555 53.3
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 1.4e-120 437.6 538 51.3
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 4.2e-120 436.0 564 53.5
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 9.3e-120 434.9 580 51.2
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 2.7e-119 433.3 539 54.2
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.3e-118 431.0 547 52.3
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 1.3e-118 431.0 560 52.5
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 1.8e-118 430.6 550 50.5
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 1.8e-118 430.6 550 50.5
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 7.4e-117 425.2 553 51.2
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.6e-116 424.1 566 51.4
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.8e-116 423.3 479 56.6
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 3.7e-116 422.9 357 68.3
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.1e-115 421.4 548 51.8
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.4e-115 421.0 641 45.7
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 5.3e-115 419.1 492 58.5
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 9.0e-115 418.3 501 52.3
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 1.2e-114 417.9 569 50.3
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 1.3e-113 414.5 485 56.9
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 5.0e-113 412.5 536 54.1
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 5.0e-113 412.5 588 48.5
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 1.9e-112 410.6 351 68.4
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 4.2e-112 409.5 543 51.7
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 7.2e-112 408.7 518 53.3
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.2e-111 407.9 310 71.0
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 7.9e-111 405.2 554 50.0
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 1.9e-109 400.6 356 65.7
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 9.7e-109 398.3 360 66.7
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 9.7e-109 398.3 570 47.4
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 1.2e-106 391.3 489 51.3
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 1.5e-106 391.0 310 68.7
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 7.7e-106 388.7 480 52.9
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 3.2e-104 383.3 541 52.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 4.2e-104 382.9 528 49.6
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 4.2e-104 382.9 531 49.3
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 2.1e-103 380.6 535 55.1
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 2.7e-103 380.2 562 52.0
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 1.8e-102 377.5 535 55.0
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 1.8e-102 377.5 535 55.0
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 1.3e-100 371.3 548 53.5
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 2.8e-100 370.2 564 48.6
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 4.8e-100 369.4 541 54.2
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 6.3e-100 369.0 485 51.5
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 1.1e-99 368.2 557 46.9
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 4.1e-99 366.3 531 54.8
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 6.9e-99 365.5 542 53.9
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 1.1e-96 358.2 309 64.1
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 2.5e-96 357.1 506 54.5
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 4.4e-85 319.7 236 70.8
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 1.2e-82 311.6 489 48.3
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 2.7e-82 310.5 192 84.9
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.5e-80 304.7 430 50.2
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 2.7e-79 300.4 210 73.8
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 8.0e-79 298.9 221 70.6
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 5.7e-77 292.7 570 40.9
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 2.0e-66 257.7 310 48.1
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 9.5e-64 248.8 231 57.6
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 1.6e-63 248.1 223 60.5
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 6.1e-63 246.1 224 57.6
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 2.3e-62 244.2 221 59.3
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 4.6e-58 229.9 320 44.1
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 1.7e-57 228.0 254 51.2
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 3.6e-55 220.3 215 57.7
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 3.6e-47 193.7 356 44.9
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 6.8e-46 189.5 223 52.5
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 2.6e-45 187.6 198 52.0
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 3.7e-44 183.7 276 42.4
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.4e-43 181.8 204 49.0
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 1.0e-41 175.6 182 57.1
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 5.1e-41 173.3 297 41.8
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 4.1e-35 153.7 106 74.5
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.0e-33 149.1 163 52.1
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 4.0e-22 110.5 65 80.0
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.0e-21 108.2 124 49.2
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 3.4e-21 107.5 74 73.0
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 4.5e-21 107.1 126 54.8
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 1.7e-20 105.1 189 40.7
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 4.9e-20 103.6 107 53.3
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 1.6e-18 98.6 133 46.6
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 1.1e-16 92.4 152 40.1
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 4.8e-15 87.0 103 54.4
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 5.3e-14 83.6 154 47.4
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 7.6e-13 79.7 220 38.6
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 6.4e-12 76.6 115 43.5
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 1.2e-10 72.4 40 87.5
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 2.1e-10 71.6 113 43.4
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 2.7e-10 71.2 73 47.9
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 3.5e-10 70.9 75 50.7
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 3.5e-10 70.9 73 50.7
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 7.9e-10 69.7 113 41.6
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 1.0e-09 69.3 42 81.0
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 1.0e-09 69.3 107 42.1
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.3e-09 68.9 39 84.6
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 1.3e-09 68.9 39 84.6
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 1.3e-09 68.9 39 84.6
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 2.3e-09 68.2 46 67.4
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 3.0e-09 67.8 44 72.7
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 1.9e-08 65.1 54 63.0
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 4.3e-08 63.9 67 49.3
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.3e-07 62.4 108 50.0
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 1.3e-07 62.4 43 72.1
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 2.1e-07 61.6 102 48.0
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.1e-07 61.6 50 66.0
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 6.2e-07 60.1 40 82.5
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 6.2e-07 60.1 40 82.5
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 6.2e-07 60.1 40 82.5
SHI37143 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-06 58.9 88 40.9
SHI35501 Sapria himalayana HOM05D004479 ORTHO05D005597 4.0e-06 57.4 100 40.0


User provided reference genes

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